Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01187 ATGGCGTCATCTCTGATTTCGAATCCAGTGATTAACTCTGATCGTTCTCGAGAATCTTCAAGAAGGAAAAAGAAGAAGAGAACTCAACCGAACAGAGACCATAATCAAGATCAGAGCCCTGTCAAATGGAAATCCGAAGCGCAGCAGCGAATCTACTCGTCCAAGCTCGTTCAAGCGCTGAGGCAAGTGAGACTCAGCCATGACGCTTCGTCTCCAAACGAAGTTCCTCGCCGCGGCCGCGCTGTTCGCGAAGCCGCCGATAGAGTCTTAGCCGTCTCCGCCAGGGGTAAAACTCTATGGAGCCGAGCGATCTTGACGAACCGCTTGAAGCTCAAATTCTCCCAGCGGAAAAGGCAGAGAGTCTCCTACGCTGCGAATAACCGCTCAAAGAAGCCTCGAGTGAGCGTTTTGCGATTGAAAGGCAAGTCTCTACCAGCGGTTCAGAGAAAGGTTCGGCTACTCGGACGTTTGGTTCCTGGGTGCCGGAAGCAATCGTTTCCGGTGATTCTAGAAGAGGCTACTGATTATATAGCCGCTCTTGAGATGCAGGTCCGTGCAATCGCTCTGTTGCTCTCTGCTTCTGATTCTGGTTCCTCCTTGTCACCGCCGAGCTGA 615 52.03 MASSLISNPVINSDRSRESSRRKKKKRTQPNRDHNQDQSPVKWKSEAQQRIYSSKLVQALRQVRLSHDASSPNEVPRRGRAVREAADRVLAVSARGKTLWSRAILTNRLKLKFSQRKRQRVSYAANNRSKKPRVSVLRLKGKSLPAVQRKVRLLGRLVPGCRKQSFPVILEEATDYIAALEMQVRAIALLLSASDSGSSLSPPS 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14162899 14163513 + Bda017264.1 Bda03g01187 4446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01187 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 188 IPR036638 GO:0046983
Bda03g01187 204 CDD bHLH_AtIBH1_like 136 187 IPR044549 GO:0006355
Bda03g01187 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 201 IPR044660 GO:0006355
Bda03g01187 204 MobiDBLite consensus disorder prediction 1 45 - -
Bda03g01187 204 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01187 Bda-Chr3:14162899 Bda08g00328 Bda-Chr8:3391480 1.25E-89 dispersed
Bda03g01187 Bda-Chr3:14162899 Bda08g00347 Bda-Chr8:3570660 3.77E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01187 - - csin:114308377 246.128