Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01188 | TTAAAACCCAAAAAGAAGAATCAGAAGAAGGAAAAGGAGGCAAGAGTTGCATTCATGACAAAGAGTGAGGTGGATCACCTTGATGATGGCTACAGATGGCGAAAGTATGGCCAAAAAGCTGTGAAAAATAGCCCCTATCCAAGAAGCTATTATCGGTGCACCGCCCCGGGATGTCGAGTGAAGAAGAGAGTCGAGCGGCTTTCCAATGACCCTTCCACCATCGTCACCACCTATGAAGGTCAACACAGCCATCCAGCCCCGTTAACCCCTCGTGGAATCGTCGAAATTTTGCCGGAATCTACCCCCTTTCCCTCGACTAATTGGCCAACACCATTTTCACTATCCCAATATCTACTCCACCGACAAAATCGAGGAGGAGGAGGAATGAGTAATAGCTCATCCTCTTCTCTGCACATTGCCGCAAACCCTTCTCCCATCAGTCCTATTCCTACAATGTCTGCTTTTGCTCGCCAACAAAGACAACAATTTGGACCATCTTTGGCTTCTGATTTGCTCACAGACCATGGCCTTCTTCAAGATGTAGTGCCATTGCAGATGCGAGGGGAGTTGATGAAAGATGAGAAAATTTAA | 591 | 46.87 | LKPKKKNQKKEKEARVAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTAPGCRVKKRVERLSNDPSTIVTTYEGQHSHPAPLTPRGIVEILPESTPFPSTNWPTPFSLSQYLLHRQNRGGGGMSNSSSSSLHIAANPSPISPIPTMSAFARQQRQQFGPSLASDLLTDHGLLQDVVPLQMRGELMKDEKI | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 14265918 | 14266577 | + | Bda017266.1 | Bda03g01188 | 4447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01188 | 196 | SUPERFAMILY | WRKY DNA-binding domain | 19 | 87 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda03g01188 | 196 | SMART | WRKY_cls | 27 | 86 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda03g01188 | 196 | ProSiteProfiles | WRKY domain profile. | 22 | 87 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda03g01188 | 196 | Pfam | WRKY DNA -binding domain | 28 | 85 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda03g01188 | 196 | PANTHER | WRKY TRANSCRIPTION FACTOR 48-RELATED | 1 | 183 | - | - | |
Bda03g01188 | 196 | Gene3D | WRKY domain | 11 | 88 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda03g01188 | 196 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 183 | IPR044810 | GO:0003700 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g01188 | Bda11g00494 | CCT | |
Bda03g01188 | Bda13g00224 | CCT | |
Bda03g01188 | Bda11g00494 | ECH | |
Bda03g01188 | Bda13g00224 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01188 | Bda-Chr3:14265918 | Bda11g00494 | Bda-Chr11:5270703 | 7.51E-53 | dispersed | |
Bda03g01188 | Bda-Chr3:14265918 | Bda13g00224 | Bda-Chr13:2849666 | 5.17E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15733 | PF03106 | WRKY | 9.20E-27 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01188 | - | - | hbr:110669417 | 199.904 |