Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01249 ATGGGAGCTAAAAAATCCAATATTTTATTTGTTTTTGTTTGTGTTATTATTGGTTTGTGCGATGGAAGTGGATTGAGGAGGAATTACTACCGCAAAAGTTGCTCAAATGCTGAGAGAATTATTAGGAATATAACATGGTTTAGGGTTCAAAGTAATCCTGCCTTGGCTGCAAGCCTTCTTAGACTCCATTTCCATGACTGCTTTATAAGGGGATGCGATGGATCTATTCTACTAGACTCTGTCGATGGAGGCAACCAATCCGAGAAGGAAGCTAAACAGAACCGATCTCTCCGAGGTTTTGAAGTGATTGATGAAATCAAAACAGAAATCGAAAATTCATGTCCTGGAGTTGTCTCCTGTGCTGACATCCTTTCTTTGGTTGCTCGAGATGCTATTGCTTTTCAATTTAAAAGGTCGTTGTGGGAGGTGGAGAGTGGAAGAAGAGACGGAAGGGTTTCCGACGTGGATGAAGTGAGTGGGAACATTCCTTCTCCATTTTCGAATTTCTCCACTCTTAAGCAACTTTTTGATGATAAAGGTCTTGGTGTCAAAGACCTGGTCGCGTTATCAGGAGCGCATACCATCGGAGTAGCCCACTGCGGAGCATTCGCTCGGAGATTATACAACTTCACCGGCAATGGCGACGCCGATCCATCTCTCAACTCAGACTATTCCGACTTTCTCAGATCTCGCTGTCCCGATCCTCCCGACAATTCAACAACCGTCCAAATGGATCCCCACACTCCCTTCTCCTTCGATTCTAACTACTTCTCCCTTCTCTCCGACAACAGAGGCCTTTTCCAATCTGACGCCGCTCTTCTCTCCGACCGCGGCTCCGCCCATTTGGTCAGAATGTTCAGACGACCCAACACTTTTCTTTCGGCGTTCTCTGCATCGGTGAGAAAGTTGTCCACCGTCGACGTCCTCACTGGAACATCCGGTGAAATCAGAAAGAACTGTCGCCTTGTTAATTCTTAA 978 45.81 MGAKKSNILFVFVCVIIGLCDGSGLRRNYYRKSCSNAERIIRNITWFRVQSNPALAASLLRLHFHDCFIRGCDGSILLDSVDGGNQSEKEAKQNRSLRGFEVIDEIKTEIENSCPGVVSCADILSLVARDAIAFQFKRSLWEVESGRRDGRVSDVDEVSGNIPSPFSNFSTLKQLFDDKGLGVKDLVALSGAHTIGVAHCGAFARRLYNFTGNGDADPSLNSDYSDFLRSRCPDPPDNSTTVQMDPHTPFSFDSNYFSLLSDNRGLFQSDAALLSDRGSAHLVRMFRRPNTFLSAFSASVRKLSTVDVLTGTSGEIRKNCRLVNS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17873000 17874701 - Bda017372.1 Bda03g01249 4508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01249 325 PANTHER PEROXIDASE 10 324 - -
Bda03g01249 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Bda03g01249 325 Pfam Peroxidase 49 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PANTHER PEROXIDASE 25-RELATED 10 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 Gene3D - 28 324 - -
Bda03g01249 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Bda03g01249 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Bda03g01249 325 Gene3D Peroxidase, domain 2 163 303 - -
Bda03g01249 325 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01249 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01249 Bda-Chr3:17873000 Bda14g00716 Bda-Chr14:5413681 9.88E-109 dispersed
Bda09g00772 Bda-Chr9:14296421 Bda03g01249 Bda-Chr3:17873000 2.65E-33 dispersed
Bda10g00691 Bda-Chr10:41153939 Bda03g01249 Bda-Chr3:17873000 1.21E-63 dispersed
Bda03g01249 Bda-Chr3:17873000 Bda05g00146 Bda-Chr5:6260633 2.84E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01249 K00430 - egr:104414959 403.29