Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01283 ATGGGTGCACCAAAGAAAATTGGGTCGAGGATTTCTGACGACTCTGAGGAGTTGGCTCGTGTTTCCTTGCAGGCCATCCTTCTTGCTGATAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGAAGCCCTCCCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTACTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTATTACTGATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTCCTCAGTCTTTTCACAAATAACTTTGACTATCAGCATCTTCGACGCCACTTTGTCAAAGGATTGCTTGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCTAGCTATGCGGCTAGGATTGATAATTTTGGAAGCTATGACGCAATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCCGATGTTAAATTCTTTGGAAATTCCACGACAAAACTTGAAAGACAGGGAATGTATAGAGCTTCAGATATTAGGCAAGCTCGTTCTGCTCCTTGTACTGCTATCGGAAAGAACACTGAAATCGGGTGCAACACCAAAAACGTTTTGATAGAAGGTTCTTACATATGGGATAATGTTACTATCGAGGACGGCTGTAAACTAAGGCATGCAATTGTTTGCGATGGAGTGACCCTGAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTCAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCAATGTTTCAGCAACCAACCAAGCTAGATAGTGATGAGGAGCTAGAATATGCTGATAATAGCAGTGTTATTATTGAAAGTAATGATTATTACTATCTATTTTCCTTTTGGAATTCGCATGACTCTTTGAAATTGATGTCAACAAATCTTGGTACTGGTGGTGTTGGACATATATGGTCAGATTTTGAAGGAAACATTGAGGAAAGATGGAGGCACTCAGTTGCACCCATTCCTGCGGATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCTGCTCAAGATGGAGGCCTTCTTCCTCCTTCAGGAGAGTTGAAACCCAGTTCCAATGATTCTGAAGATGATGATAATGAAGATTCTAGGGACGACTCCACTTACTTTGAAAAAGAGGTGGAAGCAACTTTCTTAAGAGCTGTGCACGAAAATATTAAAGTAGACAACGTAATTTTGGAAGTGAACTCGTTACGATTATCATATAATAAAGAAGCTGCGGATTGTGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACTCCACATAGTTCTGCTAGTGAATTGTTGCAAAATGCTACAAGTACAATTACAAAATGGAAAAAACTTCTCAAGTCTTACCTTGCTGACTTGGATGAGGAGATAGAAGTAATTTTGAAATTTGAAGAGATGTGTGTGGAATCTGCCAAGGAATTTAATCCATACTTCGCGAAGATATTGTGTCACTTGTACGACCAAGAAATAATTCACGAGGAGGCCATTTTACGGTGGGAAGACGAGAAGAAGGACGCAGAGGAATCAGATAAAATTTTCGTCAAGCAATCTGAGAAATTTATACAATGGTTGAGAGAGGCATCAGAGGAGGAAGAAGAAGAAGAAGAGGGAGGAGAAGATGAATGA 1917 39.59 MGAPKKIGSRISDDSEELARVSLQAILLADSFATKFQPITLERPKIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSKPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDICSPEVLSLFTNNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFGSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDIRQARSAPCTAIGKNTEIGCNTKNVLIEGSYIWDNVTIEDGCKLRHAIVCDGVTLRLGAELEPGVVLSFNVVIGQQFVVPAYSKVSMFQQPTKLDSDEELEYADNSSVIIESNDYYYLFSFWNSHDSLKLMSTNLGTGGVGHIWSDFEGNIEERWRHSVAPIPADKVAEAMQARDDDFELSAQDGGLLPPSGELKPSSNDSEDDDNEDSRDDSTYFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKEAADCAGAIFFSLIKYSLETPHSSASELLQNATSTITKWKKLLKSYLADLDEEIEVILKFEEMCVESAKEFNPYFAKILCHLYDQEIIHEEAILRWEDEKKDAEESDKIFVKQSEKFIQWLREASEEEEEEEEGGEDE 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22325291 22333140 - Bda017448.1 Bda03g01283 4542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01283 638 SUPERFAMILY Nucleotide-diphospho-sugar transferases 47 292 IPR029044 -
Bda03g01283 638 MobiDBLite consensus disorder prediction 431 463 - -
Bda03g01283 638 Pfam eIF4-gamma/eIF5/eIF2-epsilon 552 631 IPR003307 GO:0005515
Bda03g01283 638 Gene3D Hexapeptide repeat proteins 244 365 - -
Bda03g01283 638 PANTHER - 46 633 - -
Bda03g01283 638 PANTHER - 7 46 - -
Bda03g01283 638 SUPERFAMILY Trimeric LpxA-like enzymes 191 336 IPR011004 -
Bda03g01283 638 SMART 542_3 540 627 IPR003307 GO:0005515
Bda03g01283 638 Gene3D - 453 632 - -
Bda03g01283 638 ProSiteProfiles W2 domain profile. 460 631 IPR003307 GO:0005515
Bda03g01283 638 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 46 633 - -
Bda03g01283 638 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 46 - -
Bda03g01283 638 CDD W2_eIF2B_epsilon 466 625 IPR044123 GO:0005085|GO:0031369
Bda03g01283 638 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 46 227 IPR029044 -
Bda03g01283 638 SUPERFAMILY ARM repeat 466 624 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01283 Bda-Chr3:22325291 Bda11g01433 Bda-Chr11:19447973 5.06E-20 dispersed
Bda03g01283 Bda-Chr3:22325291 Bda09g00482 Bda-Chr9:6307787 5.27E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01283 K03240 - qsu:112039284 865.144