Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01354 ATGATTTCTGTTGCGTCCTCCATTGAAACACAGCAGCCGGAGCTTTCTCCGACGGCGGTTAAACCACCGTCACCTAACATTCTTAGAAAGGTGGATTCCGAAACTACCGTCATCTTCAAATCGAAATTGCCGGATATCCCCATCCCCAACCACCTCCCTCTTCCGACCTACTGCTTTGAGCGGCTCTCCGAGTTCTCCGAACGGCCATGTCTGATAGTCGGATCCACCGGAAAAACCTACACTTTCGGAGAAACCCACCTCATTTCCAAAAGAGTTGGAGCCGGATTGACCAGTCTCGGCATTAAAAAGAACGACGTCATAATGATTCTCCTCCAAAATTCCGCTGAATTCATTTTCACTTTCATCGGAGCGGCCATGATCGGCGCCGTCACCACCACGGCCAACCCGTTCTACACCAGCGCAGAAGTTTTCAAGCAAATAAAATCCTCCGGAGCCAAACTGATCGTAACGCAGGCGCAGTACGTTGAAAAACTCCGGGAGCCAACGGAAAACGACCCCAAACTCGGGGAGGATTTCACAGTAATCACCATTGACAACCCGCCGGAGAAATGCCTACACTTCTCAGCAATTTCGGAGTCTAACGAGAACGGTCTTCCAGTCACTGCCATCGACGCAAACGACCCAGTGGCGCTGCCGTTTTCCTCCGGCACCACCGGGCTGCCGAAGGGAGTAATTCTCACCCACAAAAGCTTAATAACAAGCGTAGCTCAGCAAGTAGACGGAGAGAATCCAAATCTCTATCTAACTCCAGACGACGTGGTTTTATGCGTCCTCCCACTATTTCACATATACTCTCTCAATAGCGTCCTTTTATGCTCCTTGAGAGCTGGAGCAGCCGTTTTGCTCATGCAAAAGTTTGAGATGGGGGCATTTTTGGAATTAATCGTCAGGCACAAGGTGTCGGTGGCTGCGGTGGTGCCGCCGCTCGTATTGGCTCTTGCCAAAAACTCTAAGGTGGCGGAATTCAACCTCAGCTCCATTCGGGTGGTGTTGTCGGGGGCTGCTCCGCTAGGGAAGGAGCTGGAGGAGGCCCTCAAGAGCCGACTGCCCCAAGCCACTCTTGGTCAGGGGTATGGGATGACAGAAGCCGGGCCGGTCCTGTCGATGTGCTTGGGGTTTGCACGTCAGCCATTTGCCACCAAGTCCGGGTCGTGTGGGACGGTGGTCAGAAATGCAGAGCTGAAAGTAATCGACCCTAACACCGGAGCATCCCTTGGCTACAACCAGCCCGGAGAGATCTGCATTCGCGGCTCCCAAATCATGAAAGGGTATTTAAATGACGACGAGGCCACAACAAACACCATCGACGTGGCCGGATGGCTTCACACCGGAGACATTGGCTACGTCGATGAAGATGAAGAAGTTTTCATTGTAGATAGAGTGAAAGAGCTCATTAAATTCAAAGGATTCCAGGTGCCACCGGCTGAGCTTGAGTCTCTTCTTGTGAGCCATCCATCAATCGCAGATGCAGCAGTCGTGCCGCAAAAAGATGTAGTTGCTGGGGAAGTTCCTGTTGCATTTGTTGTTCGTTCAAATGGGTTAGATCTCACTGAAGAAGATGTGGTGTTCTACAAGAAACTACACAGAGTACACTTTGTGAGTGCAATTCCGAAGTCTCCTGCCGGTAAGATTTTGAGAAAGGATTTAAGAGCAAAGCTTGCATCGCCATTCCCTCTCTTCACTTAA 1707 50.97 MISVASSIETQQPELSPTAVKPPSPNILRKVDSETTVIFKSKLPDIPIPNHLPLPTYCFERLSEFSERPCLIVGSTGKTYTFGETHLISKRVGAGLTSLGIKKNDVIMILLQNSAEFIFTFIGAAMIGAVTTTANPFYTSAEVFKQIKSSGAKLIVTQAQYVEKLREPTENDPKLGEDFTVITIDNPPEKCLHFSAISESNENGLPVTAIDANDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLTPDDVVLCVLPLFHIYSLNSVLLCSLRAGAAVLLMQKFEMGAFLELIVRHKVSVAAVVPPLVLALAKNSKVAEFNLSSIRVVLSGAAPLGKELEEALKSRLPQATLGQGYGMTEAGPVLSMCLGFARQPFATKSGSCGTVVRNAELKVIDPNTGASLGYNQPGEICIRGSQIMKGYLNDDEATTNTIDVAGWLHTGDIGYVDEDEEVFIVDRVKELIKFKGFQVPPAELESLLVSHPSIADAAVVPQKDVVAGEVPVAFVVRSNGLDLTEEDVVFYKKLHRVHFVSAIPKSPAGKILRKDLRAKLASPFPLFT 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49076453 49079359 + Bda017797.1 Bda03g01354 4613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01354 568 Gene3D - 469 562 IPR045851 -
Bda03g01354 568 PANTHER 4-COUMARATE--COA LIGASE 3 36 559 - -
Bda03g01354 568 Pfam AMP-binding enzyme C-terminal domain 483 550 IPR025110 -
Bda03g01354 568 MobiDBLite consensus disorder prediction 1 26 - -
Bda03g01354 568 CDD 4CL 48 556 - -
Bda03g01354 568 Gene3D - 29 468 IPR042099 -
Bda03g01354 568 MobiDBLite consensus disorder prediction 1 17 - -
Bda03g01354 568 SUPERFAMILY Acetyl-CoA synthetase-like 46 562 - -
Bda03g01354 568 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 559 - -
Bda03g01354 568 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Bda03g01354 568 Pfam AMP-binding enzyme 61 474 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01354 Bda-Chr3:49076453 Bda05g00249 Bda-Chr5:42387458 0 dispersed
Bda10g00944 Bda-Chr10:43762481 Bda03g01354 Bda-Chr3:49076453 1.61E-110 dispersed
Bda03g01352 Bda-Chr3:48786072 Bda03g01354 Bda-Chr3:49076453 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01354 K01904 - jre:108988342 867.84