Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01357 | CTTCACTCAAGCAGTATATTGGTTTCAAATGATGCAGCTGCAACGCTCCAGGCACTTAAAAATCAATGGAAAAATGTACCACCAAGCTGGCAAAACTCAAATGATCCTTGTGGAGGTTCCTGGGATGGAGTTACCTGCAACAATTCAAGAGTAACAGGATTGGGATTATCAAGCATGAATCTGGAAGGTAAACTTAGTGGTGATATTGGAGGCCTGTCTGAGTTGACATCCTTGGACCTGTCGTTCAACTCAAATCTGACAGGTTCTCTTTCTCCTCGTTTAGGAGATTTGAAAAAGTTAACTATCTTAATTCTGGCTGGCTGTGGCTTTAGTGGTAGCATTCCAGATGAATTAGGCAATCTTGAAGAGCTATCCTTCTTGGCTCTGAATTCAAATAATTTCTCTGGGACAATACCTTCCTCTTTGGGTAATCTTTCGAAACTTTATTGGCTGGACATAGCCGACAATCAATTGGTTGGACAAATTCCAGTTTCAACTTCCAACACAACAGGCTTGGATCGCCTTTTAAATGCTAAACACTTCCATTTCAATAAAAACAAGCTGACAGGCTCCATACCACCAAAACTATTTAGCACGGAGATGATATTAATACATCTATTATGCGATGGAAATCAACTTTCTGGGAATATTCCATCAACACTAGGACTGGTTCAAACCCTTGAGGTTCTTCGGCTTGATCGAAATACTCTTTCAGGAAGTGTGCCATCCAATTTGAGCAACCTTACAGAACTAAATGAACTGCATCTTGCCCACAATAACTTGATAGGTCCATTACCAAACTTAGGCCAAATGAGTTCTCTAAATTATGTGGACCTAAGTAACAACTCATTTGACTCCTCACCCGCTCCGGTTTGGTTCTCAAACTTATCATCTCTAACTACCTTGATTATGGAATTCGGATCCTTACAAGGAGACGTACCACAAGAAGTCTTCAGTTTACCTCAGATACAGCAAGTGAAATTGAGGAACAATGCATTTAATGGTACTTTAGACATGGGAAGCAGCATCAGCTCACAACTGCAGCTTGTCGATTTGCAGTATAATCTGATTTCAAAACTTACTGTCGGTAATGGATACACTAAAACATTAATACTCGTCGGAAACCCCCTCTGTGATGGTGATCTCTCAAATAATAATTACTGCAAGCTTCAGCAAGGAACTACCGAGCCCTATTCTACTAGCCTATCCAACTGTGGCAGTAAAACGTGCGAATTTGATCAGAAGTTGAATCCTCAAAGTTGTGAATGTGCTTATCCATATGAAGGAATTTTGTATTTCAGAGGACCCTCATTCAGGGAATTGTCCAATGCTACTTTGTTTAATTCACTGGAAAAGAGCCTGTGGCAGACTCTTGGCCTCACCCCCGGCTCAGTTTCTCTAGAAAACCTTTTCTTCAATACTGATGACTATCTTCAAATGAATCTATATCTCTTTCCAACCACAGAACAATATTTCAACAGATCCGAGATTCAAAGACTTGGTTTTGCCTTGAGTAATCAAACTTATAAACCCCCGCCCGAGTTTGGGCCTTATTATTTTATCGCCTCTCCTTACGGTTTTTTGGTCTCAACCTCAAATAAACGATCTATCAGCTCTGGTGTGATAGCGGGTATATCAGTTGGCTGCGGGCTTCTCATTATTGGCCTTGTTGGAGTTGCACTCTACGCCCTTCGGCAAAAGAAACGTGCAGAAAAAGCCATCGGATTGAGCAGACCATTCGCTTCGTGGGTGCCAAGTGGCAATGATAGTGGAGGGGCACCGCAGTTAAAAGGAGCGAGATGGTTTTCCTATGAGGAGCTCAAAAAATGCACCAATAATTTCTCTGAGAGCAATGAGATAGGGGCTGGAGGCTATGGCAAGGTTTATAGAGGAGTGTTACCGGACGGAGTAATAGTTGCCATCAAAAGAGCCCAGCAAGGATCAATGCAGGGAGCAGCCGAGTTCAAGAACGAAATTGAATTGCTTTCGCGAGTTCATCACAAAAACCTCGTTGGCCTCGTCGGATTTTGTTTCGAACAAGGAGAACAGATGCTGGTCTATGAATTTATGCCTAATGGAACCCTCAGAGAGTCACTCTCTGGGAAATCTGGAAGTCAACTTGATTGGAATAGAAGATTACGAATGGCTCTTGGATCGGCCAGAGGACTAGCGTATCTACATGAACTTGCAAATCCTCCGATAATCCACAGAGATGTTAAGTCCACCAATATCCTGCTCGATGAAAATTTGACGGCAAAGGTTGCGGATTTTGGACTGTCGAAGCTCGTAGCAGATGGCGATAAAGGGCACGTGTCGACTCAAGTAAAAGGCACGCTGGGCTATCTGGATCCTGAATACTACATGACCAATCAATTAACGGAGAAGAGCGATGTCTATAGCTTTGGAGTCGTTATGTTGGAACTGATTACGGCAAAGCAACCGATCGAAAAAGGGAAGTACATAGTTCGTGAAGTTCGAACATTGATGAACAAGAATGATGAACAATATGGGGTGCGAGAGCTAATAGACCCCATCATTAGAAAAATGTCTTACCTTCTTGGGTTTGGCAGATTTTTGGAGTTGGCCATGCAATGCGTGGAAGAATCGGCCGCAAAACGTCCAACGATGAACGACTTAGTCAAGGCAATCGAAACCATTTTACAGAGCGACGGTATAGACACAAACTCCACATCTGCATCCTCATCGGCAACCGACTTTTCAAAAAGCGTGATGAAGCATCCTTACCACGAAGATTTATCGAGGAATGATTTTAGCGACAGCACTGCTTTTGAGTATAGTGGTAAAAACTACCTTTCTACAAGTGTGGAGCCAAAATAG | 2838 | 42.64 | LHSSSILVSNDAAATLQALKNQWKNVPPSWQNSNDPCGGSWDGVTCNNSRVTGLGLSSMNLEGKLSGDIGGLSELTSLDLSFNSNLTGSLSPRLGDLKKLTILILAGCGFSGSIPDELGNLEELSFLALNSNNFSGTIPSSLGNLSKLYWLDIADNQLVGQIPVSTSNTTGLDRLLNAKHFHFNKNKLTGSIPPKLFSTEMILIHLLCDGNQLSGNIPSTLGLVQTLEVLRLDRNTLSGSVPSNLSNLTELNELHLAHNNLIGPLPNLGQMSSLNYVDLSNNSFDSSPAPVWFSNLSSLTTLIMEFGSLQGDVPQEVFSLPQIQQVKLRNNAFNGTLDMGSSISSQLQLVDLQYNLISKLTVGNGYTKTLILVGNPLCDGDLSNNNYCKLQQGTTEPYSTSLSNCGSKTCEFDQKLNPQSCECAYPYEGILYFRGPSFRELSNATLFNSLEKSLWQTLGLTPGSVSLENLFFNTDDYLQMNLYLFPTTEQYFNRSEIQRLGFALSNQTYKPPPEFGPYYFIASPYGFLVSTSNKRSISSGVIAGISVGCGLLIIGLVGVALYALRQKKRAEKAIGLSRPFASWVPSGNDSGGAPQLKGARWFSYEELKKCTNNFSESNEIGAGGYGKVYRGVLPDGVIVAIKRAQQGSMQGAAEFKNEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGKSGSQLDWNRRLRMALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVADGDKGHVSTQVKGTLGYLDPEYYMTNQLTEKSDVYSFGVVMLELITAKQPIEKGKYIVREVRTLMNKNDEQYGVRELIDPIIRKMSYLLGFGRFLELAMQCVEESAAKRPTMNDLVKAIETILQSDGIDTNSTSASSSATDFSKSVMKHPYHEDLSRNDFSDSTAFEYSGKNYLSTSVEPK | 945 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 49237166 | 49244919 | + | Bda017805.1 | Bda03g01357 | 4616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01357 | 945 | ProSiteProfiles | Protein kinase domain profile. | 614 | 887 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01357 | 945 | SUPERFAMILY | L domain-like | 27 | 390 | - | - | |
Bda03g01357 | 945 | Gene3D | Phosphorylase Kinase; domain 1 | 588 | 689 | - | - | |
Bda03g01357 | 945 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672|GO:0006468 | |
Bda03g01357 | 945 | Gene3D | Ribonuclease Inhibitor | 10 | 169 | IPR032675 | - | |
Bda03g01357 | 945 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 9 | 919 | - | - | |
Bda03g01357 | 945 | ProSitePatterns | Protein kinases ATP-binding region signature. | 620 | 642 | IPR017441 | GO:0005524 | |
Bda03g01357 | 945 | SMART | serkin_6 | 614 | 887 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01357 | 945 | CDD | STKc_IRAK | 620 | 886 | - | - | |
Bda03g01357 | 945 | PANTHER | LRR RECEPTOR-LIKE KINASE | 9 | 919 | - | - | |
Bda03g01357 | 945 | Gene3D | Ribonuclease Inhibitor | 170 | 405 | IPR032675 | - | |
Bda03g01357 | 945 | Gene3D | Transferase(Phosphotransferase) domain 1 | 690 | 909 | - | - | |
Bda03g01357 | 945 | SUPERFAMILY | Protein kinase-like (PK-like) | 599 | 896 | IPR011009 | - | |
Bda03g01357 | 945 | Pfam | Leucine rich repeat N-terminal domain | 10 | 47 | IPR013210 | - | |
Bda03g01357 | 945 | Pfam | Protein tyrosine and serine/threonine kinase | 617 | 882 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01357 | Bda-Chr3:49237166 | Bda06g00175 | Bda-Chr6:2450799 | 2.58E-06 | dispersed | |
Bda07g01039 | Bda-Chr7:12250829 | Bda03g01357 | Bda-Chr3:49237166 | 8.72E-72 | dispersed | |
Bda09g01321 | Bda-Chr9:44983469 | Bda03g01357 | Bda-Chr3:49237166 | 8.03E-13 | dispersed | |
Bda09g01525 | Bda-Chr9:46916421 | Bda03g01357 | Bda-Chr3:49237166 | 1.01E-75 | dispersed | |
Bda11g00253 | Bda-Chr11:2967625 | Bda03g01357 | Bda-Chr3:49237166 | 9.20E-80 | dispersed | |
Bda12g00218 | Bda-Chr12:2227373 | Bda03g01357 | Bda-Chr3:49237166 | 8.32E-64 | dispersed | |
Bda12g00813 | Bda-Chr12:37532606 | Bda03g01357 | Bda-Chr3:49237166 | 6.14E-95 | dispersed | |
Bda15g00043 | Bda-Chr15:1916344 | Bda03g01357 | Bda-Chr3:49237166 | 3.50E-102 | dispersed | |
Bda13g01904 | Bda-Chr13:43385738 | Bda03g01357 | Bda-Chr3:49237166 | 5.43E-59 | transposed | |
Bda14g01586 | Bda-Chr14:34138287 | Bda03g01357 | Bda-Chr3:49237166 | 1.22E-153 | transposed | |
Bda02g00198 | Bda-Chr2:36687294 | Bda03g01357 | Bda-Chr3:49237166 | 9.57E-22 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69564 | PF07714 | PK_Tyr_Ser-Thr | 6.40E-50 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01357 | - | - | qsu:112004607 | 1409.05 |