Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01357 CTTCACTCAAGCAGTATATTGGTTTCAAATGATGCAGCTGCAACGCTCCAGGCACTTAAAAATCAATGGAAAAATGTACCACCAAGCTGGCAAAACTCAAATGATCCTTGTGGAGGTTCCTGGGATGGAGTTACCTGCAACAATTCAAGAGTAACAGGATTGGGATTATCAAGCATGAATCTGGAAGGTAAACTTAGTGGTGATATTGGAGGCCTGTCTGAGTTGACATCCTTGGACCTGTCGTTCAACTCAAATCTGACAGGTTCTCTTTCTCCTCGTTTAGGAGATTTGAAAAAGTTAACTATCTTAATTCTGGCTGGCTGTGGCTTTAGTGGTAGCATTCCAGATGAATTAGGCAATCTTGAAGAGCTATCCTTCTTGGCTCTGAATTCAAATAATTTCTCTGGGACAATACCTTCCTCTTTGGGTAATCTTTCGAAACTTTATTGGCTGGACATAGCCGACAATCAATTGGTTGGACAAATTCCAGTTTCAACTTCCAACACAACAGGCTTGGATCGCCTTTTAAATGCTAAACACTTCCATTTCAATAAAAACAAGCTGACAGGCTCCATACCACCAAAACTATTTAGCACGGAGATGATATTAATACATCTATTATGCGATGGAAATCAACTTTCTGGGAATATTCCATCAACACTAGGACTGGTTCAAACCCTTGAGGTTCTTCGGCTTGATCGAAATACTCTTTCAGGAAGTGTGCCATCCAATTTGAGCAACCTTACAGAACTAAATGAACTGCATCTTGCCCACAATAACTTGATAGGTCCATTACCAAACTTAGGCCAAATGAGTTCTCTAAATTATGTGGACCTAAGTAACAACTCATTTGACTCCTCACCCGCTCCGGTTTGGTTCTCAAACTTATCATCTCTAACTACCTTGATTATGGAATTCGGATCCTTACAAGGAGACGTACCACAAGAAGTCTTCAGTTTACCTCAGATACAGCAAGTGAAATTGAGGAACAATGCATTTAATGGTACTTTAGACATGGGAAGCAGCATCAGCTCACAACTGCAGCTTGTCGATTTGCAGTATAATCTGATTTCAAAACTTACTGTCGGTAATGGATACACTAAAACATTAATACTCGTCGGAAACCCCCTCTGTGATGGTGATCTCTCAAATAATAATTACTGCAAGCTTCAGCAAGGAACTACCGAGCCCTATTCTACTAGCCTATCCAACTGTGGCAGTAAAACGTGCGAATTTGATCAGAAGTTGAATCCTCAAAGTTGTGAATGTGCTTATCCATATGAAGGAATTTTGTATTTCAGAGGACCCTCATTCAGGGAATTGTCCAATGCTACTTTGTTTAATTCACTGGAAAAGAGCCTGTGGCAGACTCTTGGCCTCACCCCCGGCTCAGTTTCTCTAGAAAACCTTTTCTTCAATACTGATGACTATCTTCAAATGAATCTATATCTCTTTCCAACCACAGAACAATATTTCAACAGATCCGAGATTCAAAGACTTGGTTTTGCCTTGAGTAATCAAACTTATAAACCCCCGCCCGAGTTTGGGCCTTATTATTTTATCGCCTCTCCTTACGGTTTTTTGGTCTCAACCTCAAATAAACGATCTATCAGCTCTGGTGTGATAGCGGGTATATCAGTTGGCTGCGGGCTTCTCATTATTGGCCTTGTTGGAGTTGCACTCTACGCCCTTCGGCAAAAGAAACGTGCAGAAAAAGCCATCGGATTGAGCAGACCATTCGCTTCGTGGGTGCCAAGTGGCAATGATAGTGGAGGGGCACCGCAGTTAAAAGGAGCGAGATGGTTTTCCTATGAGGAGCTCAAAAAATGCACCAATAATTTCTCTGAGAGCAATGAGATAGGGGCTGGAGGCTATGGCAAGGTTTATAGAGGAGTGTTACCGGACGGAGTAATAGTTGCCATCAAAAGAGCCCAGCAAGGATCAATGCAGGGAGCAGCCGAGTTCAAGAACGAAATTGAATTGCTTTCGCGAGTTCATCACAAAAACCTCGTTGGCCTCGTCGGATTTTGTTTCGAACAAGGAGAACAGATGCTGGTCTATGAATTTATGCCTAATGGAACCCTCAGAGAGTCACTCTCTGGGAAATCTGGAAGTCAACTTGATTGGAATAGAAGATTACGAATGGCTCTTGGATCGGCCAGAGGACTAGCGTATCTACATGAACTTGCAAATCCTCCGATAATCCACAGAGATGTTAAGTCCACCAATATCCTGCTCGATGAAAATTTGACGGCAAAGGTTGCGGATTTTGGACTGTCGAAGCTCGTAGCAGATGGCGATAAAGGGCACGTGTCGACTCAAGTAAAAGGCACGCTGGGCTATCTGGATCCTGAATACTACATGACCAATCAATTAACGGAGAAGAGCGATGTCTATAGCTTTGGAGTCGTTATGTTGGAACTGATTACGGCAAAGCAACCGATCGAAAAAGGGAAGTACATAGTTCGTGAAGTTCGAACATTGATGAACAAGAATGATGAACAATATGGGGTGCGAGAGCTAATAGACCCCATCATTAGAAAAATGTCTTACCTTCTTGGGTTTGGCAGATTTTTGGAGTTGGCCATGCAATGCGTGGAAGAATCGGCCGCAAAACGTCCAACGATGAACGACTTAGTCAAGGCAATCGAAACCATTTTACAGAGCGACGGTATAGACACAAACTCCACATCTGCATCCTCATCGGCAACCGACTTTTCAAAAAGCGTGATGAAGCATCCTTACCACGAAGATTTATCGAGGAATGATTTTAGCGACAGCACTGCTTTTGAGTATAGTGGTAAAAACTACCTTTCTACAAGTGTGGAGCCAAAATAG 2838 42.64 LHSSSILVSNDAAATLQALKNQWKNVPPSWQNSNDPCGGSWDGVTCNNSRVTGLGLSSMNLEGKLSGDIGGLSELTSLDLSFNSNLTGSLSPRLGDLKKLTILILAGCGFSGSIPDELGNLEELSFLALNSNNFSGTIPSSLGNLSKLYWLDIADNQLVGQIPVSTSNTTGLDRLLNAKHFHFNKNKLTGSIPPKLFSTEMILIHLLCDGNQLSGNIPSTLGLVQTLEVLRLDRNTLSGSVPSNLSNLTELNELHLAHNNLIGPLPNLGQMSSLNYVDLSNNSFDSSPAPVWFSNLSSLTTLIMEFGSLQGDVPQEVFSLPQIQQVKLRNNAFNGTLDMGSSISSQLQLVDLQYNLISKLTVGNGYTKTLILVGNPLCDGDLSNNNYCKLQQGTTEPYSTSLSNCGSKTCEFDQKLNPQSCECAYPYEGILYFRGPSFRELSNATLFNSLEKSLWQTLGLTPGSVSLENLFFNTDDYLQMNLYLFPTTEQYFNRSEIQRLGFALSNQTYKPPPEFGPYYFIASPYGFLVSTSNKRSISSGVIAGISVGCGLLIIGLVGVALYALRQKKRAEKAIGLSRPFASWVPSGNDSGGAPQLKGARWFSYEELKKCTNNFSESNEIGAGGYGKVYRGVLPDGVIVAIKRAQQGSMQGAAEFKNEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGKSGSQLDWNRRLRMALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVADGDKGHVSTQVKGTLGYLDPEYYMTNQLTEKSDVYSFGVVMLELITAKQPIEKGKYIVREVRTLMNKNDEQYGVRELIDPIIRKMSYLLGFGRFLELAMQCVEESAAKRPTMNDLVKAIETILQSDGIDTNSTSASSSATDFSKSVMKHPYHEDLSRNDFSDSTAFEYSGKNYLSTSVEPK 945
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49237166 49244919 + Bda017805.1 Bda03g01357 4616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01357 945 ProSiteProfiles Protein kinase domain profile. 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01357 945 SUPERFAMILY L domain-like 27 390 - -
Bda03g01357 945 Gene3D Phosphorylase Kinase; domain 1 588 689 - -
Bda03g01357 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Bda03g01357 945 Gene3D Ribonuclease Inhibitor 10 169 IPR032675 -
Bda03g01357 945 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 919 - -
Bda03g01357 945 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Bda03g01357 945 SMART serkin_6 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01357 945 CDD STKc_IRAK 620 886 - -
Bda03g01357 945 PANTHER LRR RECEPTOR-LIKE KINASE 9 919 - -
Bda03g01357 945 Gene3D Ribonuclease Inhibitor 170 405 IPR032675 -
Bda03g01357 945 Gene3D Transferase(Phosphotransferase) domain 1 690 909 - -
Bda03g01357 945 SUPERFAMILY Protein kinase-like (PK-like) 599 896 IPR011009 -
Bda03g01357 945 Pfam Leucine rich repeat N-terminal domain 10 47 IPR013210 -
Bda03g01357 945 Pfam Protein tyrosine and serine/threonine kinase 617 882 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01357 Bda-Chr3:49237166 Bda06g00175 Bda-Chr6:2450799 2.58E-06 dispersed
Bda07g01039 Bda-Chr7:12250829 Bda03g01357 Bda-Chr3:49237166 8.72E-72 dispersed
Bda09g01321 Bda-Chr9:44983469 Bda03g01357 Bda-Chr3:49237166 8.03E-13 dispersed
Bda09g01525 Bda-Chr9:46916421 Bda03g01357 Bda-Chr3:49237166 1.01E-75 dispersed
Bda11g00253 Bda-Chr11:2967625 Bda03g01357 Bda-Chr3:49237166 9.20E-80 dispersed
Bda12g00218 Bda-Chr12:2227373 Bda03g01357 Bda-Chr3:49237166 8.32E-64 dispersed
Bda12g00813 Bda-Chr12:37532606 Bda03g01357 Bda-Chr3:49237166 6.14E-95 dispersed
Bda15g00043 Bda-Chr15:1916344 Bda03g01357 Bda-Chr3:49237166 3.50E-102 dispersed
Bda13g01904 Bda-Chr13:43385738 Bda03g01357 Bda-Chr3:49237166 5.43E-59 transposed
Bda14g01586 Bda-Chr14:34138287 Bda03g01357 Bda-Chr3:49237166 1.22E-153 transposed
Bda02g00198 Bda-Chr2:36687294 Bda03g01357 Bda-Chr3:49237166 9.57E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69564 PF07714 PK_Tyr_Ser-Thr 6.40E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01357 - - qsu:112004607 1409.05