Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01378 ATGGATAGTGAGACGTGGGTGCTTGATTCCTCCATGGATCATACAGGGAGAGTTCCTCTCCGAGCCTCGACTGGTGCTTGGAAAGCCTCCCTCTTCATTATTGCCATTGAGTTTGCTGAGAGGCTGAGTTACTTTGGAATAGCTAGTAGCTTAATCATCTACCTCACGAGGGTTCTGCATCAAGACCTTACGACAGCAGCCAAGAGTGTCAATCACTGGACTGGTGTCACCACTTTGATGCCACTTCTCGGAGGCTTCTTAGCCGACGCCTACTTTGGCCAATTCGTCACTGTTATCACTTCGTCCATAGTCTATATTTTGGGTTTGATTCTGCTAATGATGTCATCCTTCCTGCCAACCTTAAAAGCCTGCAATACAGAAATGTGTAGCCAACCCAGGAAGGTCCATGAAGTAGTCTATTTCGTTGCCATTTACATGCTCTCTCTCGGAACAGGAGGACATAAACCATCTCTCGAGAGCTTCGGAGCTGATCAATTCGACGAAGAACACCCTAAAGAAAGGATGCAGAAAATGTCTTTCTTCAACTGGTGGAATTTCGGCCTGTGTTGTGGCCTTTTACTTGGCGTTACTGTCGTCGTCTATGTCCAAGATCATGCTAGCTGGGGCGAGGCCGATGCCATTCTCACTGCCGTAATGCTGACATCGCTTGCTATTTTTATAGCCGGCAGGCAGTTTTATCGCTTCAGAGTGGCAAAGGGAAGCCCTCTAACGCCATTGTTGCAGGTTCTAGTTGCAGCATTTCGAAACAGAAACCTGCCTTATCCTTCCAATCCTGCTCTTTTGTATGAACTTCCAAAGACGGAACAAGTAAGAGGGAGGTTTTTGTGTCACACGAAGAAACTCAAATTTCTCGACAAGGCGGCTATCATTGAAGATTCTGGAAATGAAGCTCAGAAACAAAGGCCATGGAGTCTAGCTACTGTGACTAAGGTGGAAGAAATGAAGCTCATTCTCAATATAGCCCCCATTTGGATCGCCAGTTTACCGTTCGGCATTTGCGCCGCTCAAGCTTCGACGTTCTTCATCAAACAATCGACAGCACTTGATCGACAAATTTACGACGGATTCGTAATCCCACCGGCCTCTATTTTCTCTCTCGCCGCCATAGGAATGATAATCTCGGTCACCCTCTACGACAAAATACTCGTTCCAGTTCTCCGGCGAGTGACTGGCAACGAGAGAGGCATAAACATACTTCAGAGAGTCGGAATCGGAATGCTTTTGTCGGTAGCCACAATGGCGATTGCAGCCATTGTAGAGCGAAAAAGACTACAAATCGTGGAGATCGATCCAGAGAGAGGCTCCCTGTCCATGTCAGTATTCTGGTTAGCTCCTCAGTTCGTCATCATCGGCTTCGCTGATGGGTTTGCTCTCGTCGGCTTGCAAGAGTACTTCTACGACCAAGTCCCCGATTCGATGCGAAGCCTCGGAATTGCACTTTACTTGAGCGTTATCGGAGCGGCGAACATCCTCAGTAGCTGGGTAATAACAATGGTGGATCGTATGACGGTGGAGGGTGGGAAGAGTTGGTTTGGAAGAGATTTGAACGGTAGTCGTTTGGATAAATTTTATTGGCTGCTGGCGGCCATAACCGCTGCAAATTTTTGCATTTACGTGTTCTTGGCTCGGCGATATTCGTACAAAAGTGTGAAGAAGATGGCAGTCGCCGACTGCTACGAGGGAGAGGCCGCGTTAGATTCAATTGCCTAA 1731 47.72 MDSETWVLDSSMDHTGRVPLRASTGAWKASLFIIAIEFAERLSYFGIASSLIIYLTRVLHQDLTTAAKSVNHWTGVTTLMPLLGGFLADAYFGQFVTVITSSIVYILGLILLMMSSFLPTLKACNTEMCSQPRKVHEVVYFVAIYMLSLGTGGHKPSLESFGADQFDEEHPKERMQKMSFFNWWNFGLCCGLLLGVTVVVYVQDHASWGEADAILTAVMLTSLAIFIAGRQFYRFRVAKGSPLTPLLQVLVAAFRNRNLPYPSNPALLYELPKTEQVRGRFLCHTKKLKFLDKAAIIEDSGNEAQKQRPWSLATVTKVEEMKLILNIAPIWIASLPFGICAAQASTFFIKQSTALDRQIYDGFVIPPASIFSLAAIGMIISVTLYDKILVPVLRRVTGNERGINILQRVGIGMLLSVATMAIAAIVERKRLQIVEIDPERGSLSMSVFWLAPQFVIIGFADGFALVGLQEYFYDQVPDSMRSLGIALYLSVIGAANILSSWVITMVDRMTVEGGKSWFGRDLNGSRLDKFYWLLAAITAANFCIYVFLARRYSYKSVKKMAVADCYEGEAALDSIA 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49956117 49958863 - Bda017840.1 Bda03g01378 4637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01378 576 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 84 108 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bda03g01378 576 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 13 563 - -
Bda03g01378 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bda03g01378 576 Pfam POT family 95 513 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bda03g01378 576 SUPERFAMILY MFS general substrate transporter 23 557 IPR036259 -
Bda03g01378 576 Gene3D MFS general substrate transporter like domains 2 561 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00200 Bda03g01378 CCT
Bda03g01378 Bda05g00950 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01378 Bda-Chr3:49956117 Bda15g00240 Bda-Chr15:5049919 0 dispersed
Bda03g01378 Bda-Chr3:49956117 Bda01g00200 Bda-Chr1:24772930 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01378 - - tcc:18597665 853.203