Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01388 ATGCTTCAAATTCGGCTTAGTAGGATTCCTGCTGCAGAAGGTGTGAGTGGGGTAAAGCCTTTGCCTGCTGACTCTGTTACGGTTGCATGCCCTGACCACCTTGTCCTAGCTGATCTGCCTGTGGCAAAGGCCATTGGTTCAGCAACCGCTGCCTCCCTTGTCAAGTCTGTGGGTCGCCGGTCACGCCGTCAACTTGGCGAACGCGTCCATTTTTGTGTTCGATGTGATTACCCTATTGCGATCTATGGCCGCCTGAGCCCTTGTGAGCATGCCTTCTGTCTGGATTGTGCGAGGAGTGTTTCAATTTGTTATCTTTGTGACGAACGTATTCAGAAGATCCAAACAGTTAAAATGATGGAGGGCATCTTCATTTGTGCAGCACCTCATTGTCTCAAGTCCTTTATGAAGAGGACTGAATTTGAATTCCATATTCATGAGAATCATGCTGACCTACTTCAGCCAAATCCTGAGAAAGATGATGGAAATGAATCTGAGGCTCAGAGTAACAAACAATCTACAGCTTCTGATTCAACTGTCCGAGGTCCACTAAGGCAAGTATTTTCTCCGGGTTCCAATACCCAGCATCTAGATCGGGAAGACAAAGCTCAGCGTCAACAATCTAGAGACCAATCTTGGTCAGCTACACTTTCAAAACAGTCTACAAGTTTTGGCCAACCCCAACATAACCTATCAGACTCTCTACTGGATGACAGCCAACCACAAACCCTTGACAGGCTCGATAGTCAAAACCGTTTCCTCCAACAAAACTTTGAAACCCAAGGTGCTCCATATCAGGAAACCGGTCTGTTACCGGATAAGCAACTAGGAATTCTATCTGATCCGTCATTTTCTGAATATCCACCCATGCATACTATTCAGCCACCAAGCTTTGTGGTACCGATGACCTCAAACTTAATGTTGACTCCCCCTCTAGCATTTGGTTATCCTCCTTTTCCAACGGAGGGATCCCAACAGTTTTACAGTGCACCTTATGAAGTGGCCAGGCAAGATTCAGCTGCACCTCAAGTAGGACTAGAGCAGGGGTCGTTGTTGGGTTTCCCTCCATCAGTTGGTACAAATTTTTCGGGAAGTTATCAGCAGCCCTGGAATGCTGTGAAAGTCATTCCTTTTGAACCTTCTGCTGGGGGTCAAGGATTTTCAGATGGTTTGGATGACTCTCAAGTGAAAGGTGGATTCTATCAGGCTGAATATGGCCGCCATCCAGGAAGTTTGCCATTGAGTGCTTCCATTCCACCTTTGGCTAGTAAGGGGCTTGAACCAGTGCAGAGTGGCAGCGCGATGGATCTCAGGGATGGGAAGGGTATATTGGCATCACAGCCTATGCCATTTTCTGCTCGGCCACACCCACCGCAACCTCAGTCCTCACAACACATGCGAGGTAAGTTTTATTTGGGCGAAATGGGTCATGATGGACATGGGTTTTGGATGGCAGCATGA 1458 47.53 MLQIRLSRIPAAEGVSGVKPLPADSVTVACPDHLVLADLPVAKAIGSATAASLVKSVGRRSRRQLGERVHFCVRCDYPIAIYGRLSPCEHAFCLDCARSVSICYLCDERIQKIQTVKMMEGIFICAAPHCLKSFMKRTEFEFHIHENHADLLQPNPEKDDGNESEAQSNKQSTASDSTVRGPLRQVFSPGSNTQHLDREDKAQRQQSRDQSWSATLSKQSTSFGQPQHNLSDSLLDDSQPQTLDRLDSQNRFLQQNFETQGAPYQETGLLPDKQLGILSDPSFSEYPPMHTIQPPSFVVPMTSNLMLTPPLAFGYPPFPTEGSQQFYSAPYEVARQDSAAPQVGLEQGSLLGFPPSVGTNFSGSYQQPWNAVKVIPFEPSAGGQGFSDGLDDSQVKGGFYQAEYGRHPGSLPLSASIPPLASKGLEPVQSGSAMDLRDGKGILASQPMPFSARPHPPQPQSSQHMRGKFYLGEMGHDGHGFWMAA 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 50464023 50466572 + Bda017860.1 Bda03g01388 4647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01388 485 MobiDBLite consensus disorder prediction 150 241 - -
Bda03g01388 485 MobiDBLite consensus disorder prediction 166 193 - -
Bda03g01388 485 MobiDBLite consensus disorder prediction 442 464 - -
Bda03g01388 485 MobiDBLite consensus disorder prediction 150 165 - -
Bda03g01388 485 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 464 - -
Bda03g01388 485 MobiDBLite consensus disorder prediction 207 241 - -
Bda03g01388 485 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Bda03g01388 485 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Bda03g01388 485 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 123 IPR013083 -
Bda03g01388 485 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 464 IPR040383 GO:0016567|GO:0061630
Bda03g01388 485 CDD RING-HC_HAKAI_like 70 106 IPR040380 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01388 K15685 - qsu:112018474 623.624