Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01412 ATGGTGCTATTAGTAGGTGCTCCAGGAAGCGGCAAATCCACCTTCTGCGAAAACCTCATATCCTCTTCTACCTCCTCTTGGGTTCGAATCTGCCAGGATACTATTGCAAATGGTAAATCTGGAACTAGAGCTCAGTGTCTAAAGAGTGCAGCCTGTGCGTTAAAAGATGGAAAAAATGTACTAATAGACAGATGCAATATGGAAAAAGAACAACGGGCAGATTTCGTTAAGCTTGGTAGCTCCCAAGTGGATGTTCATGCTGTCGTCCTGGATCTTCCTGCACAACTTTGCATTTCTCGATCTGTTAAGCGAACGGGTCATGAAGGAAACCTACAAGGTGGCAAAGCTGCTGCAGTAGTGAATAAAATGCTGCAGAAGAAAGAATTGCCTAAACTCAGTGAAGGGTTTACTCGTCTCACTTACTGTCAGAATGAGAGTGATGTTCAATCCACACTCAATACATATAGTTCACTCGGTCCTTTGAATACCCTTCCGCATGGATATTTTGGCCAAAAAAATCCAATTGCAAAAGTGCAACTTGGCATAATGAAGTTCCTCAAGAAAGCTGATGATCATACTCCTACAAGATACGAAGCACCAAACATTCAGAATTCATCTCGTCAAGCTACAGAAATTAAGAGTACCTGCAGTGAAATTATATCTTCAGTGTCTTCTCACTCCAATAAAGAGTTAAAGGAAGGAGAGGATCCTACGGTCGAGTCTGTCGAAGGCGAGAGATTTTCAAATAATGCTCAAACTCTTGCATTTCCATCTATTTCAACGGCAGATTTCCAATTCAGTCTTGAAAAGGCATCTGAGATTATTGTCGACAAAGTTGAAGAATTTATGGACAAGCTTGGGAATTCCAGGCTTGTTTTAGTAGACTTGAGCCATAGGTCAAAGATTTTGTCTTTGGTTAAGGCGAAAGCTGATCAGAGAAACATTGACTCAAGTAAGTTTTCAACATTTGTGGGAGATATAACTCAACTTTATTCAAAAGGTGGCTTGCGCTGCAATGTCATTGCTAATGCTGCAAACTGGAGGCTAAAACCTGGAGGTGGAGGCGTGAATGCTGCCATTTTCAAAGCTGCTGGTACTGCACTGGAAGTGGCAACCAAAGAGCAGTCAAAGTCTCTTCAACCTGGTAATGCAGTTGTAGTTTCTCTACCTTCAGCTTCTCCATTGTTCAAAAAGGAAGGTGTGACTCATGTCATACATGTTCTTGGACCAAATATGAATTCTCAAAGGCCGAATTGCCTCAATAATGATTATAACAAAGGTTCTGAACTTCTCCGGGCGGCTTATACTTCTCTATTTGAAGGCTTTCTCTCTTTAGTGAGAAATCAATCAAATTTATCTAAAGATTGTAGTGATCACTTTGAGTCGAAGCCTTTAGAGTCACCAAAAGAAGCTCAGGGTGTGGCTAGGAATCCATTTTATGGTGGTGACCAAAAGATGAAGAGAGAGAGCGATCTAGAGTTCGAAAAGAGCAAAAAATGCAAAGGCCATCAGCTGGAAGATGATACTGACCTTGGAAGTGTGAATACAAAGAGTAAGAAAATTGGTGAAAACACAAGCAAGGCATGGGGATCTTGGGCTCAATCGCTGTACAAAATTGCTATGGAGCCTGAGACTCATAAGGATGAAGTTTTGGAGATATCAGATGATGTTGTTGTACTAAATGATCTTTATCCGAAGGCACAGAGACATGTCCTAGTTTTGGCTCGTGCCGAAGGCCTTGAATGCTTGGTCAACGTCAGGGCTGATCAACTTCAGTTGTTGAGGAAGATGCATGCAGTGGGCTTGAAGTGGGCAGAAAAGTTCATGCATGAAGATGCTTCGTTAGTCTTTCGCCTTGGATATCACTCAGCCCCGTCAATGCGACAACTTCATCTCCATGTGATTAGCCAGGATTTCAATTCGAAACACTTGAAGAATAAGAAACATTGGAATTCTTTTAACACTGCTTTCTTTAGGGACTCTGTCGATGTAATTGAGCAGGTCGATATTCACGGGAAAGCAACAGTGAAGGATGACAAATCTCTGATATCTATGGAGTTACGATGCAACCGATGTAGAAGTGCTCACCCCAACATTCCCAAATTGAAGTTACATATCAGCCACTGTCGAGCTCCATTTCCTTCCCATCTTCTTCAAAATAGTCGTCTTGTTCAGGCACCAACTATTGATAATGATGTTCCATAA 2205 41.72 MVLLVGAPGSGKSTFCENLISSSTSSWVRICQDTIANGKSGTRAQCLKSAACALKDGKNVLIDRCNMEKEQRADFVKLGSSQVDVHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAVVNKMLQKKELPKLSEGFTRLTYCQNESDVQSTLNTYSSLGPLNTLPHGYFGQKNPIAKVQLGIMKFLKKADDHTPTRYEAPNIQNSSRQATEIKSTCSEIISSVSSHSNKELKEGEDPTVESVEGERFSNNAQTLAFPSISTADFQFSLEKASEIIVDKVEEFMDKLGNSRLVLVDLSHRSKILSLVKAKADQRNIDSSKFSTFVGDITQLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFKAAGTALEVATKEQSKSLQPGNAVVVSLPSASPLFKKEGVTHVIHVLGPNMNSQRPNCLNNDYNKGSELLRAAYTSLFEGFLSLVRNQSNLSKDCSDHFESKPLESPKEAQGVARNPFYGGDQKMKRESDLEFEKSKKCKGHQLEDDTDLGSVNTKSKKIGENTSKAWGSWAQSLYKIAMEPETHKDEVLEISDDVVVLNDLYPKAQRHVLVLARAEGLECLVNVRADQLQLLRKMHAVGLKWAEKFMHEDASLVFRLGYHSAPSMRQLHLHVISQDFNSKHLKNKKHWNSFNTAFFRDSVDVIEQVDIHGKATVKDDKSLISMELRCNRCRSAHPNIPKLKLHISHCRAPFPSHLLQNSRLVQAPTIDNDVP 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 51057327 51060402 - Bda017896.1 Bda03g01412 4671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01412 734 Gene3D Leucine Aminopeptidase, subunit E, domain 1 299 441 IPR043472 -
Bda03g01412 734 PANTHER APRATAXIN-RELATED 1 728 - -
Bda03g01412 734 ProSiteProfiles Macro domain profile. 307 525 IPR002589 -
Bda03g01412 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 110 IPR027417 -
Bda03g01412 734 Gene3D - 531 712 IPR036265 -
Bda03g01412 734 MobiDBLite consensus disorder prediction 224 244 - -
Bda03g01412 734 ProSitePatterns HIT domain signature. 618 636 IPR019808 -
Bda03g01412 734 MobiDBLite consensus disorder prediction 457 483 - -
Bda03g01412 734 Pfam C2HE / C2H2 / C2HC zinc-binding finger 654 707 IPR032566 -
Bda03g01412 734 Gene3D - 1 157 IPR027417 -
Bda03g01412 734 Pfam AAA domain 1 109 - -
Bda03g01412 734 Pfam Macro domain 342 438 IPR002589 -
Bda03g01412 734 SMART YBR022w_8 319 597 IPR002589 -
Bda03g01412 734 MobiDBLite consensus disorder prediction 228 242 - -
Bda03g01412 734 SUPERFAMILY Macro domain-like 302 440 IPR043472 -
Bda03g01412 734 SUPERFAMILY HIT-like 521 693 IPR036265 -
Bda03g01412 734 Gene3D Leucine Aminopeptidase, subunit E, domain 1 192 298 IPR043472 -
Bda03g01412 734 PANTHER APRATAXIN 1 728 IPR026963 GO:0003677|GO:0006281|GO:0033699
Bda03g01412 734 Pfam Scavenger mRNA decapping enzyme C-term binding 538 649 - -
Bda03g01412 734 SUPERFAMILY Macro domain-like 247 293 IPR043472 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01412 K10863 - qsu:112040136 1006.13