Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01439 ATGAAGACAGTGTATAGGGCATTTGATGAGGTGCTTGGAATGGAGGTGGCTTGGAATCAGGTTAAGCTCAAAGAGGTCTTCCACTCGCCAGATTTATTGCAGAGGCTTTACTCTGAAGTACACCTCCTCAAAAACCTCAATCATTGCTCTATCATCCGCTTCCATACCCACTGGATCGATATCAATTCTAGATCCTTCAACTTCATCACCGAAATGTTCACCTCCGGCACCCTTAGAGAATATAGACGGAAATATCAGCAAGTGGATATAAGGGCAGTGAAGAACTGGGCCCGTCAGATTCTATGCGGTTTGGCTTATCTTCATGAGCATGATCCTCCGGTGATCCATCGAGACCTCAAATGTGACAACATATTTGTCAATGGCCATCTCGGACAAGTCAAGATTGGCGATTTGGGTTTGGCTGCAATTCTTCAAGGATCCCAACGAGCTCACAGTGTCATAGGTACTCCGGAATTTATGGCCCCGGAGCTATACGAAGAGGAATACAATGAGCTTGTTGATATATACTCGTTTGGAATGTGTGTCCTAGAGATGCTGACTTCAGAGTACCCTTACAGCGAGTGCTCTAACCCTGCCCAAATCTACAAAAAGGTCACCGCGGGGAAATTGCCCCAAGCATTCTACCGAATTCAAGATAAGGAACTGCAGCAATTCGTGGAGAGATGCATAGGGCCTGCTTCGAAGAGGTCGAGCGCAAGAGAGCTCTTGCTGGATCCTTTTCTATCACCCGAGAGCTTACTTCCCAGTGGAACAGTAATGGGGGCTCCTCCATTGAGAAGCAAGGACATGACCATCACTGGAACGATGAATTCAGAAGATGAGACAATTTTTCTTAGAGTGCAGATTACCGATCAGGATGGTCAATCGAATAACATTTACTTTCCGTTTGACATCGTGAAAGATACTGCAATTGATGTGGCAAATGAGATGGTAAAAGAGCTGGAAATTTGTGGGTGGGAGCCAATGGAAATATCTAAGATGATAGAGGAGCAAATCACTTCTCTACTTCCTGGTTGGAAGCAGCTTGGTTCTCCACAATTTCATGATCAGCTCAGTTTCAATTATCAAGAAGAAGAAGAAGATGTTAACATCACACCCTGCCCGTTATACTCAGATTCCTTATGCTCGTCCTCCTCGTCTTCTCTCCCACCTCTCAACCCCTCGCACGAAACCCAGGATTTGCACGGACTGGGAGCGATTTCTAGTCATGACTGCTGGCTTCAAGGTACTTACTCATATTTTGTTAAGAAGTCTTTTTTTTGCATCTTTTAA 1293 45.01 MKTVYRAFDEVLGMEVAWNQVKLKEVFHSPDLLQRLYSEVHLLKNLNHCSIIRFHTHWIDINSRSFNFITEMFTSGTLREYRRKYQQVDIRAVKNWARQILCGLAYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQRAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTAGKLPQAFYRIQDKELQQFVERCIGPASKRSSARELLLDPFLSPESLLPSGTVMGAPPLRSKDMTITGTMNSEDETIFLRVQITDQDGQSNNIYFPFDIVKDTAIDVANEMVKELEICGWEPMEISKMIEEQITSLLPGWKQLGSPQFHDQLSFNYQEEEEDVNITPCPLYSDSLCSSSSSSLPPLNPSHETQDLHGLGAISSHDCWLQGTYSYFVKKSFFCIF 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 51799784 51801450 - Bda017933.1 Bda03g01439 4698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01439 430 SUPERFAMILY Protein kinase-like (PK-like) 3 294 IPR011009 -
Bda03g01439 430 Gene3D Transferase(Phosphotransferase) domain 1 73 253 - -
Bda03g01439 430 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01439 430 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01439 430 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 1 404 - -
Bda03g01439 430 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01439 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Bda03g01439 430 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 404 - -
Bda03g01439 430 Gene3D - 266 348 - -
Bda03g01439 430 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01439 Bda-Chr3:51799784 Bda05g00554 Bda-Chr5:53426529 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69567 PF00069 Pkinase 7.20E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01439 K08867 - qsu:112004065 586.645