Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01443 | ATGGAGTCAAGGACTTGCACGAATGTGTCCTGCGGTGCGTCGTCATTAGCCCAGTGGAAGAATGGCTGGCCCCTGCGATCCGGCGATTTCGCCACCCTCTGTGATAAGTGCGGGTCTGCTTATGAGCAATCAATTTTCTGTGATTTGTTCCACGCAACTGACTCTGGGTGGAGAGAATGTACTTTGTGTGGCAAGCGCCTACATTGTGGATGTGTTGCTTCAAGGTCTTTACTGGAGCTACTGGATAGTGGTGGTGTTGCTAAAAAAGAAATTTGTAATGAATTGGAGACATCCAAACTTCATGGTACTTGTAAGCTGCAATCCATTTCTAAGGATAAACAGTTGGATGACAGTGATGACAAAATAAAGTTTATTCAAATAGACAATCATACTGTGGGTAATGAACGAAGACTTTTGCTCCAATCTCAAAACCATGGCATAAATAGAAATTTGCAGCAAATAAAGCAAGAGGTCATTTTTCCCTCCGTGGGAGAAATTGGACGTGTCTGTTTCCTGGAGTTTAATCAAGATTCCAATGGATCCTCTGATGCCACTACTCCTGGTATATGTAAAGTTGACTGTGGAACAAAACATCTGTATGAACCATTGAGGCAAACAAGTACGAATGCGAACTTGGGTTCAGAAAACTCATGTCCATTACTTGAAGTTTCAATTAGTGAAAGAGAACACAAGACGTCCTCCCCATTGCAAGGTTCTAGATCTTTCCCTCTAATGCCAAAGCCACCAAGGTCAGTGCTTGCTGCAGGCTTGGATGCCAATAATGCCATGATTTCACAGATACGAGTTGCAAGGCCACCTGCCGAATGTAAGGGAAGGAATCAGTTGCTTCCTAGATATTGGCCCAGGATTACAGATCAAGAATTACAACAGTTATCCGGATCTTCAAATTCAACTGTTGTGCCTCTGTTTGAAAAGATGTTAAGTGCTAGTGATGCCGGTCGAATTGGTCGTTTGGTGGTCCCAAAAGCATGTGCTGAAGCATATTTTCCTCCCATCTCTCAACCAGAGGGTCTTCCCATAAGAATTCAAGATGTAAAAGGAAGAGAATGGGTCTTCCAGTTTAGATTTTGGCCGAATAATAACAGCAGGATGTATGTTTTGGAGGGTGTGACTCCCTGCATTCAATCAATGCAGTTGCAAGCTGGCGATACTGTGACTTTCAGTCGCATGGATCCTGAAGGAAAACTTATTATGGGATTTCGTAAAGCATCAGCTTCTGTCGCCACACAGGATAGCCATCTATCTACTATTCCCTCTGGTGCTCATTCAAGTGAAACTTTCTTTTCCGGTGCTTTTGATAACCTCTCCATTGTAAGTGGTCATTCTAGCCTTCTTCAATACCTTAAGGAAAGTGGAGGCTCACAGTTGAATGCATTGCCCAAACACTTGATTCCAGTCAGTGCTGATATGAGCTATTATAGAACGGAGAAGCATGATGACGGAACAAAGGAGCCCTTACTACTGCCTTCTGGTCTCGTACCAGAGAGGAAAAAAGCTCGTAATATTGGGTCCAAAAGTAAGAGGTTGCTCATTGATAACCAAGATTCCTTGGAGCTGAAACTTACCTGGGAAGAAGCGCAGGATTTGCTTTGCCCGCCCCCTTCAGTCAAACCTAGTAAAGTCATGATTGAGGATCATGAATTTGAAGAATATGAAGACCCACCGATCTTTGGGAAGAGGAGCATTTTTATTGCCCGTTCGATTGGGGAACAAGAGCAGTGGGTCCAGTGTGATGATTGCTCAAAATGGCGAAGGCTGCCAATTGATGTTCTTCTGCCCTCCAAGTGGACATGTGAAGACAATGTTTGGGATCAAAACAGGAAGTCATGTTCCGCTTCAGATGAATTGACGCCGAGGGAAATGGAAAACTTTTGCAAATTGGTCAAGGACTTCAAGAGACGAAGATTTATGCTAAGCCAAAGATCTCCCCAGGATTATGAATCTTCTGGTTTGGACGCTTTGGCCAATGCTGCAATTCTAGGGGACAACGATGGTGATCCAGGCACTGCATCCATTGCAACAACAACAAAACACCCGAGGCATCGTCCTGGTTGTTCCTGCATTGTCTGTATCCAGCCCCCCAGTGGCAAGGGCAAGCACAAGCCTTCATGCACTTGCAATGTGTGCATGACAGTTAAACGCCGTTTCAAAACCTTGATGATGCGCAAGAAAAAACGTCAATCAGAGCGCGAAGCAGATATTGCACAGAGAAATCAACACAAATGGGGCCCAAGAGAGGAACCGGAACTAGAAACCACCTCAAGGCATGCATCCTCGAGCATTGATCCTTCAGAGAATGAAACCCGATCAACGCACCAAGAGCTAGAATCCAAAATCCAAAACAAAGTTGGGGAAACAGAGAAGAGCCAATTAGATTTGAATTGTCATCCTGAAGAAGACGAGCTACTTGGGGGATCAAAACGAGTTAGTATGACGAGTCTTCTACAAGTTGCAAGCCTTCCTTTGGAAATGTACCTAAAACAGAATGGCCTCACAAGTTTGATATCGGAGGCTCCAACAAGTCCAACATCCAATGCTCTGCCACCAACACAGGGTGCTAATGAGATTGAAGGACAGCAGGAAAGTGGTGGAGAAGAATATTGCGAACCCGAGCAGGGCCGAAACAATCCGCAATAG | 2658 | 44.66 | MESRTCTNVSCGASSLAQWKNGWPLRSGDFATLCDKCGSAYEQSIFCDLFHATDSGWRECTLCGKRLHCGCVASRSLLELLDSGGVAKKEICNELETSKLHGTCKLQSISKDKQLDDSDDKIKFIQIDNHTVGNERRLLLQSQNHGINRNLQQIKQEVIFPSVGEIGRVCFLEFNQDSNGSSDATTPGICKVDCGTKHLYEPLRQTSTNANLGSENSCPLLEVSISEREHKTSSPLQGSRSFPLMPKPPRSVLAAGLDANNAMISQIRVARPPAECKGRNQLLPRYWPRITDQELQQLSGSSNSTVVPLFEKMLSASDAGRIGRLVVPKACAEAYFPPISQPEGLPIRIQDVKGREWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKASASVATQDSHLSTIPSGAHSSETFFSGAFDNLSIVSGHSSLLQYLKESGGSQLNALPKHLIPVSADMSYYRTEKHDDGTKEPLLLPSGLVPERKKARNIGSKSKRLLIDNQDSLELKLTWEEAQDLLCPPPSVKPSKVMIEDHEFEEYEDPPIFGKRSIFIARSIGEQEQWVQCDDCSKWRRLPIDVLLPSKWTCEDNVWDQNRKSCSASDELTPREMENFCKLVKDFKRRRFMLSQRSPQDYESSGLDALANAAILGDNDGDPGTASIATTTKHPRHRPGCSCIVCIQPPSGKGKHKPSCTCNVCMTVKRRFKTLMMRKKKRQSEREADIAQRNQHKWGPREEPELETTSRHASSSIDPSENETRSTHQELESKIQNKVGETEKSQLDLNCHPEEDELLGGSKRVSMTSLLQVASLPLEMYLKQNGLTSLISEAPTSPTSNALPPTQGANEIEGQQESGGEEYCEPEQGRNNPQ | 885 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 51914796 | 51925887 | - | Bda017941.1 | Bda03g01443 | 4702 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01443 | 885 | SMART | B3_2 | 310 | 411 | IPR003340 | GO:0003677 | |
Bda03g01443 | 885 | SUPERFAMILY | DNA-binding pseudobarrel domain | 307 | 409 | IPR015300 | - | |
Bda03g01443 | 885 | Pfam | CW-type Zinc Finger | 580 | 622 | IPR011124 | GO:0008270 | |
Bda03g01443 | 885 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 | 3 | 847 | - | - | |
Bda03g01443 | 885 | MobiDBLite | consensus disorder prediction | 842 | 865 | - | - | |
Bda03g01443 | 885 | MobiDBLite | consensus disorder prediction | 842 | 885 | - | - | |
Bda03g01443 | 885 | MobiDBLite | consensus disorder prediction | 727 | 781 | - | - | |
Bda03g01443 | 885 | CDD | B3_DNA | 308 | 409 | IPR003340 | GO:0003677 | |
Bda03g01443 | 885 | Gene3D | - | 572 | 624 | - | - | |
Bda03g01443 | 885 | ProSiteProfiles | Zinc finger CW-type profile. | 575 | 625 | IPR011124 | GO:0008270 | |
Bda03g01443 | 885 | ProSiteProfiles | B3 DNA-binding domain profile. | 310 | 411 | IPR003340 | GO:0003677 | |
Bda03g01443 | 885 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 3 | 847 | - | - | |
Bda03g01443 | 885 | MobiDBLite | consensus disorder prediction | 731 | 760 | - | - | |
Bda03g01443 | 885 | Pfam | B3 DNA binding domain | 310 | 409 | IPR003340 | GO:0003677 | |
Bda03g01443 | 885 | Gene3D | - | 288 | 414 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01443 | Bda-Chr3:51914796 | Bda09g00108 | Bda-Chr9:1959470 | 0 | dispersed | |
Bda03g01443 | Bda-Chr3:51914796 | Bda03g01650 | Bda-Chr3:55852070 | 1.04E-15 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15741 | PF02362 | B3 | 2.10E-15 | CL0405 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01443 | - | - | qlo:115953034 | 1204.89 |