Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01448 ATGGTTTCCTCTCAATTTCCTGGTTTGACGGATTCCTGCAAGCCCAAGCTCATTCAGCACCAGTTTCTTTTTCCTCTCAATTCTGATGATGCTGTGGCTGTTGATCACGTTGAGCTAGATTTCTCTGATGTTTTTGGGCCTGTACCTTTTAATGAAGTTGATTCAGCTAATCTCGGCCTAGAAGGAGAAAGAAAGCTTGTTTTTGATGATCCAGAAGTCATTCGCAATAGGTCACATTCTTTGGTCGGTCCCTCTTCATACGTAAGTCAGTCATTTGGGCTCAGCGAGCTCACTATACATGAGAGTGATGATTCAGGGGACCAAATTGAATTTATCAGTGAGGATGCTGTTGGAGAAATTCTGGAACCTTCAAATGATAATCATGTACTGGAGGGAGCTCTTCAAGGTGTGATTATGAATCCCACAAATGCACAGGGTGTTGGATTCGACGACTTTGAGATTTTAAAGGTTGTGGGCGCTGGTGCTTTTGCAAAAGTTTATCAGGTAAGGAAAAAGGGTACATCAGAGATCTATGCAATGAAAGTTATGCGGAAAGACAAGATCATGGAGAAAAATCATGCTGAATACATGAAAGCAGAGAGGGATATTTTGACAAAAGTTGAACATCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACTAAATATAGACTATATCTTGTTCTGGATTTCGTAAATGGGGGACACCTTTTCTTTCAGCTTTACCACCAAGGCCTTTTCAGGGAGGAGCTTGCACGTGTCTATGCTGCTGAGATTGTTTCTGCTGTTTCTCACCTCCACGACAATGGCATAATGCACAGAGATCTTAAACCTGAAAATATTTTACTAGATATTGATGGACATGCGATGCTGACTGATTTTGGCCTAGCGAAGCAATTTGACACCAATACAAGAAATAATTCTATGTGTGGAACGGTAGAATATATGTCACCTGAAATAGTTCTTGGAAAGGGCCATGATAAGGCTGCAGATTGGTGGAGCGTGGGAATTCTTCTGTTTGAGATGCTCACTGGGAAGCCTCCATTCACTGGGAATAGAGACAAAGTCCAGCAGAAGATAGTAAAGGATAAGATAAAGCTCCCGTCATTTTTGTCAAGCGAAGCACATTCACTTTTGAAAGGGCTGCTACAAAAGGATGCAACCAAGCGCCTCGGAAATGGGCTGATGGGTGGCGAAGACATCAAGCGCCATAAATGGTTCAAGCCGATCAATTGGAAGAAATTGGAGTCGAGAGGTATTGAACCAAGTTTTCGGCCTCAAATTGCAGGGAAGCATTGTGTTGCCAACTTTGAGAAGCACTGGACCGACATGCCGATTGCAGATTCTCCGGTCGGCAGTCCCAAGGGAGGTGGAAATGTCTTCGTGGGTTTTAGCTACGTAAGGCCACCAGCTTCATTCCTTAGTAGGTAG 1431 43.26 MVSSQFPGLTDSCKPKLIQHQFLFPLNSDDAVAVDHVELDFSDVFGPVPFNEVDSANLGLEGERKLVFDDPEVIRNRSHSLVGPSSYVSQSFGLSELTIHESDDSGDQIEFISEDAVGEILEPSNDNHVLEGALQGVIMNPTNAQGVGFDDFEILKVVGAGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARVYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFDTNTRNNSMCGTVEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNRDKVQQKIVKDKIKLPSFLSSEAHSLLKGLLQKDATKRLGNGLMGGEDIKRHKWFKPINWKKLESRGIEPSFRPQIAGKHCVANFEKHWTDMPIADSPVGSPKGGGNVFVGFSYVRPPASFLSR 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 52064923 52067340 + Bda017949.1 Bda03g01448 4707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01448 476 Gene3D Phosphorylase Kinase; domain 1 150 447 - -
Bda03g01448 476 SMART serkin_6 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01448 476 CDD STKc_AGC 158 407 IPR045270 GO:0004674|GO:0005524
Bda03g01448 476 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda03g01448 476 Gene3D Transferase(Phosphotransferase) domain 1 232 426 - -
Bda03g01448 476 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda03g01448 476 Pfam Protein kinase domain 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01448 476 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Bda03g01448 476 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 475 - -
Bda03g01448 476 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 475 - -
Bda03g01448 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Bda03g01448 476 ProSiteProfiles Protein kinase domain profile. 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01448 476 SUPERFAMILY Protein kinase-like (PK-like) 149 462 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01448 Bda-Chr3:52064923 Bda08g01356 Bda-Chr8:53936854 3.86E-62 dispersed
Bda03g01448 Bda-Chr3:52064923 Bda13g00562 Bda-Chr13:6565897 1.54E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69569 PF00069 Pkinase 7.60E-74 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01448 K04688 - zju:107431119 702.59