Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01448 | ATGGTTTCCTCTCAATTTCCTGGTTTGACGGATTCCTGCAAGCCCAAGCTCATTCAGCACCAGTTTCTTTTTCCTCTCAATTCTGATGATGCTGTGGCTGTTGATCACGTTGAGCTAGATTTCTCTGATGTTTTTGGGCCTGTACCTTTTAATGAAGTTGATTCAGCTAATCTCGGCCTAGAAGGAGAAAGAAAGCTTGTTTTTGATGATCCAGAAGTCATTCGCAATAGGTCACATTCTTTGGTCGGTCCCTCTTCATACGTAAGTCAGTCATTTGGGCTCAGCGAGCTCACTATACATGAGAGTGATGATTCAGGGGACCAAATTGAATTTATCAGTGAGGATGCTGTTGGAGAAATTCTGGAACCTTCAAATGATAATCATGTACTGGAGGGAGCTCTTCAAGGTGTGATTATGAATCCCACAAATGCACAGGGTGTTGGATTCGACGACTTTGAGATTTTAAAGGTTGTGGGCGCTGGTGCTTTTGCAAAAGTTTATCAGGTAAGGAAAAAGGGTACATCAGAGATCTATGCAATGAAAGTTATGCGGAAAGACAAGATCATGGAGAAAAATCATGCTGAATACATGAAAGCAGAGAGGGATATTTTGACAAAAGTTGAACATCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACTAAATATAGACTATATCTTGTTCTGGATTTCGTAAATGGGGGACACCTTTTCTTTCAGCTTTACCACCAAGGCCTTTTCAGGGAGGAGCTTGCACGTGTCTATGCTGCTGAGATTGTTTCTGCTGTTTCTCACCTCCACGACAATGGCATAATGCACAGAGATCTTAAACCTGAAAATATTTTACTAGATATTGATGGACATGCGATGCTGACTGATTTTGGCCTAGCGAAGCAATTTGACACCAATACAAGAAATAATTCTATGTGTGGAACGGTAGAATATATGTCACCTGAAATAGTTCTTGGAAAGGGCCATGATAAGGCTGCAGATTGGTGGAGCGTGGGAATTCTTCTGTTTGAGATGCTCACTGGGAAGCCTCCATTCACTGGGAATAGAGACAAAGTCCAGCAGAAGATAGTAAAGGATAAGATAAAGCTCCCGTCATTTTTGTCAAGCGAAGCACATTCACTTTTGAAAGGGCTGCTACAAAAGGATGCAACCAAGCGCCTCGGAAATGGGCTGATGGGTGGCGAAGACATCAAGCGCCATAAATGGTTCAAGCCGATCAATTGGAAGAAATTGGAGTCGAGAGGTATTGAACCAAGTTTTCGGCCTCAAATTGCAGGGAAGCATTGTGTTGCCAACTTTGAGAAGCACTGGACCGACATGCCGATTGCAGATTCTCCGGTCGGCAGTCCCAAGGGAGGTGGAAATGTCTTCGTGGGTTTTAGCTACGTAAGGCCACCAGCTTCATTCCTTAGTAGGTAG | 1431 | 43.26 | MVSSQFPGLTDSCKPKLIQHQFLFPLNSDDAVAVDHVELDFSDVFGPVPFNEVDSANLGLEGERKLVFDDPEVIRNRSHSLVGPSSYVSQSFGLSELTIHESDDSGDQIEFISEDAVGEILEPSNDNHVLEGALQGVIMNPTNAQGVGFDDFEILKVVGAGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREELARVYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFDTNTRNNSMCGTVEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGKPPFTGNRDKVQQKIVKDKIKLPSFLSSEAHSLLKGLLQKDATKRLGNGLMGGEDIKRHKWFKPINWKKLESRGIEPSFRPQIAGKHCVANFEKHWTDMPIADSPVGSPKGGGNVFVGFSYVRPPASFLSR | 476 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 52064923 | 52067340 | + | Bda017949.1 | Bda03g01448 | 4707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01448 | 476 | Gene3D | Phosphorylase Kinase; domain 1 | 150 | 447 | - | - | |
Bda03g01448 | 476 | SMART | serkin_6 | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01448 | 476 | CDD | STKc_AGC | 158 | 407 | IPR045270 | GO:0004674|GO:0005524 | |
Bda03g01448 | 476 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 408 | 476 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda03g01448 | 476 | Gene3D | Transferase(Phosphotransferase) domain 1 | 232 | 426 | - | - | |
Bda03g01448 | 476 | SMART | pkinase_C_6 | 408 | 468 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bda03g01448 | 476 | Pfam | Protein kinase domain | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01448 | 476 | ProSitePatterns | Protein kinases ATP-binding region signature. | 158 | 181 | IPR017441 | GO:0005524 | |
Bda03g01448 | 476 | PANTHER | SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 | 1 | 475 | - | - | |
Bda03g01448 | 476 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 1 | 475 | - | - | |
Bda03g01448 | 476 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 271 | 283 | IPR008271 | GO:0004672|GO:0006468 | |
Bda03g01448 | 476 | ProSiteProfiles | Protein kinase domain profile. | 152 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01448 | 476 | SUPERFAMILY | Protein kinase-like (PK-like) | 149 | 462 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01448 | Bda-Chr3:52064923 | Bda08g01356 | Bda-Chr8:53936854 | 3.86E-62 | dispersed | |
Bda03g01448 | Bda-Chr3:52064923 | Bda13g00562 | Bda-Chr13:6565897 | 1.54E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69569 | PF00069 | Pkinase | 7.60E-74 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01448 | K04688 | - | zju:107431119 | 702.59 |