Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01462 ATGGATCCGCGTTGTAAGGGGTACTCCTATTCCATAAAAGACATTCAATTGGGCAACCAATCTTTATTAGTTCATCCCAATCCGAATGCTGTAGTCGGGCCCAGATTTGAAAAGGCCCTTTTAGATCATAGAGTTGATGAATTTCATTATCATCCACCTGATCCCCCGCCTAGCAATGTTGTATCTAGTTCCAGTAATATCACTTCGTGTTCGAGTGCGAGCCAGGACGAAAATTCGCCCGAAGATTGTGATTTTTCCGATGCGGTTTTGCGGTACATCAGCCAGATTCTCATGGAAGAAGATATGGAGGAGAAAACTTGTATGCTTCAAGACTCTTTGGATCTTCAAGCCGCTGAGAAATCATTTTATGATGTTCTTGGCGAAAAGTATCCTCCTCATGATCAGAACAGGCCTTACAGTAGTCAATACAATGAAATTTTAGATGATAATTCATTTGGAGATTATTATAATTATCTCACTAATATTTATGGAGAAAGTGCTTATTTTGGGAATGATACTCATAATCAACTTGTTGAAGATTTCTCTCAGATGGATAGCCTACCTTCTCGTGTTATTGATCAGTCAGTATATAGCTCTTCAAATAGTGTTATTAGTAACTTTGACGGGCTTGTGGAGTCTTCGAACAGTTCTTTTTCAATTCCTGAATCTAGTAATGGAAGCCAATCAATATGGCAGTTCAGGAAAGGGGTTGAAGAGGCGAATAAATTTCTACCAGATGAAAATGTTTTATTTCTTAATCAAGGACCGGAGGGCGGTGAGGTCATCGTCAAGGTGGAGGCTAGGGAAGGCGACGAGTCGTTGCCGCGTGAATCAAGGGGAAGGAAGAATCCTCTCAGGGAAGATGGAGATTTGGAAGAGAAGAGAAGTAATAAGCTAGCGGCTATTTTCGATGACTCGACTTTACGATCTGAGATGTTTGATAATGTCTTACTTTGTAGTGCAGGCGAAGGGATGCGAAAATTGGCAGCCCTTCGCGATTATTTACAGATGGCAAAACGGAGAAGTTTGGAGCAGAACGGACAAACGAAGGGATATAACGGAGGGAGGGGCCGGTGGAAGAAACAGAACAGGAAGAAGGAGGTGGTGGATTTGAGAACTTTGTTGATTCACTGTGCACAGGCTGTTGCTGCTGATGATCATAGGAATGCAAATGAATTGCTTAGGCAAATTAGGCAGCATGCGTCTCCTTTTGGAGATGGAAACCAAAGGTTAGCTAACTGCTTTGCTGAAGGGCTCGAGTCCCGGTTGGCTGGCATAGGAAGCCAGATATATAAAGGTCTTGTCAGTAAGAGAAGATGTGCTGCAGATCTGTTGAAAGCTTACCATTTATTCCTAGCAGCCTGTCCATTTCGGAAAATGTCGAATTTTACATCTAATAAGACGATAATGAGTATTGCAGCAAATTCAAGTAGACTTCATGTCATAGACTTTGGCATTCTTTATGGATTTCAATGGCCAACCCTTATTCAGAGACTCTCATGGAGAAAAGGCGGTCCTCCGAAGCTTCGAATCACCGGAATTGAGTTTCCCCAGCCGGGTTTTCGACCGGCTGAGCGAGTGGAGGAAACGGGCCGTCGTTTGTCGGCTTATGCAGAAACTTTCAAGGTGCCGTTCGAGTACAATGCCGTAGCAAAAAACTGGGAGACTGTTACCATTGACGATCTCAAGATAGAAGGTGACGAAGTCTTGGTTGTCAACTGCCTGTACCGAGCAAAGAACTTGCACGATGAAAGTGTGGCAGTGGAAAGTGCCCGAAATAAGTTTCTTCAAGTTGTACGCAAAATAAATCCGAACATCTTCATCTTCGGTGCTGTCAACGGTTCATATAATGCCCCCTTCTTTGTTACTCGTTTTCGAGAGGCACTCTTCCACTATTCTGCGCTGTTTGACATGCTTGAAACTGTCGTCCCGAGGGAGGATGGAGAGAGAATGTTGATCGAGAAGGAAATCTTTGGTCGAGAAGCTTTGAATGTTATTGCATGCGAAGGCTGGGAGAGAGTCGAAAGACCAGAGACCTATAAGCAGTGGCAGGTTCGAATCATGAGGGCCGGATTCTTGCAGCTTGAAGTACACAGAGAGATTATAAAGGGTGCAAAGGAGAAAGTAAACACAAGTTACCACAAGGATTTTGTAATCGACGAAGATAGCAAATGGATGCTACAGGGATGGAAGGGAAGAACTATATATGCCCTCTCTGCTTGGAAACCTGTTTAG 2235 43.58 MDPRCKGYSYSIKDIQLGNQSLLVHPNPNAVVGPRFEKALLDHRVDEFHYHPPDPPPSNVVSSSSNITSCSSASQDENSPEDCDFSDAVLRYISQILMEEDMEEKTCMLQDSLDLQAAEKSFYDVLGEKYPPHDQNRPYSSQYNEILDDNSFGDYYNYLTNIYGESAYFGNDTHNQLVEDFSQMDSLPSRVIDQSVYSSSNSVISNFDGLVESSNSSFSIPESSNGSQSIWQFRKGVEEANKFLPDENVLFLNQGPEGGEVIVKVEAREGDESLPRESRGRKNPLREDGDLEEKRSNKLAAIFDDSTLRSEMFDNVLLCSAGEGMRKLAALRDYLQMAKRRSLEQNGQTKGYNGGRGRWKKQNRKKEVVDLRTLLIHCAQAVAADDHRNANELLRQIRQHASPFGDGNQRLANCFAEGLESRLAGIGSQIYKGLVSKRRCAADLLKAYHLFLAACPFRKMSNFTSNKTIMSIAANSSRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLSAYAETFKVPFEYNAVAKNWETVTIDDLKIEGDEVLVVNCLYRAKNLHDESVAVESARNKFLQVVRKINPNIFIFGAVNGSYNAPFFVTRFREALFHYSALFDMLETVVPREDGERMLIEKEIFGREALNVIACEGWERVERPETYKQWQVRIMRAGFLQLEVHREIIKGAKEKVNTSYHKDFVIDEDSKWMLQGWKGRTIYALSAWKPV 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 52268244 52270478 - Bda017966.1 Bda03g01462 4721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01462 744 MobiDBLite consensus disorder prediction 47 82 - -
Bda03g01462 744 ProSiteProfiles GRAS family profile. 362 742 IPR005202 -
Bda03g01462 744 MobiDBLite consensus disorder prediction 266 292 - -
Bda03g01462 744 PANTHER SCARECROW-LIKE PROTEIN 9 40 743 - -
Bda03g01462 744 MobiDBLite consensus disorder prediction 60 79 - -
Bda03g01462 744 Pfam GRAS domain family 371 742 IPR005202 -
Bda03g01462 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 743 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01462 Bda-Chr3:52268244 Bda14g00135 Bda-Chr14:943576 0 dispersed
Bda03g01462 Bda-Chr3:52268244 Bda03g01464 Bda-Chr3:52319520 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15744 PF03514 GRAS 1.80E-121 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01462 - - cit:102622070 940.643