Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01464 ATGGATCCGCGTTGTAAGGGGTACTCCTATTCCATAAAAGACATTCAATTGGGCAACCAATCTTTATTAGTTCATCCCCATCCGAATGCTGTAGTCGGGCCCAGATTTGAAAAGGCCCTTTTAGATCATAGAGTTGATGAATTTCATTATCATCCACCTGATCCCCCGCCTAGCAATGTTGTATCTAGTTCGAGTAATATCACTTCGTGTTCGAGTGCGAGCCAGGACGAAAATTCACCCGAAGATTGTGATTTTTCCGATGCGGTTTTGGGGTACATCAGCCAGATTCTCATGGAAGAAGATATGGAGGAGAAAACTTGTATGCTTCAAGACTCTTTGGATCTTCAAGCCGCTGAGAAATCATTTTATGATGTTCTTGGCGAAAAGTATCCTCCTCATGATCAGAACAGGCCTTACAGTAGTCAATACAATGAAATTTTAGATGATAATTCATTTGGAGATTATTATAATTATCTCACTAATATTTATGGAGAAAGTGCTTATTTTGGGTATGATACTCATAATCAACTTGTTGAAGATTTCTCTCAGATGGATAGCCTACCTTCTCGTGTTATTGATCAGTCAGTATATAGCTCTTCAAATAGTGTTATTAGTAACTTCGACGGGCTTGTGGAGTCTTCGAACAGTTCTTTTTCAATTCCTGAATCTAGTAATCGAAGCCAATCAATATGGCAGTTCAGGAAAGGGGTTGAAGAGGCGAATAAATTTCTACCAGATGAAAATGGTTTATTTCTTAATCAAGGACCGGAGGCCGGTGAGGTCATCGTCAAGGTGGAGGCTAGGGAAGGCGACGAGTCGTTGCCGCGTGAATCAAGGGGAAGGAAGAATCCTCTCAGGGGAGATGGAGATTTGGAAGAGAAGAGAAGTAATAAGCTAGCAGCTATTTTCGATGACTCGACTTTACGATCTGAGATGTTTGACAATGTCTTACTTTGTAGTGCAGGCGAAGGGATGCGAAAATTGGCAGCCCTTCGCGATTATTTACAGAAGGCAAAACGGAGAAGTTTGGAGCAGAACGGACAAACAAAGGGATATAACGGAGGGAGGGGCCGGTGGAAGAAACAGAACAGGAAGAAGGAGGTGGTGGATTTGAGAACTTTGTTGATTCACTGTGCACAGGCTGTTGCTGCTGATGATCATAGGAATGCAAATGAATTGCTTAGGCAAATTAGGCAGCATGCGTCTCCTTTTGGAGATGGAAACCAAAGGTTAGCTAACTGCTTTGCTGAAGGGCTCGAGTCCCGGTTGGCTGGCATAGGAAGCCAGATATATAAAGGTCTTGTCAGTAAGAGAAGATGTGCTGCTGATCTGTTGAAAGCTTACCATTTATTCCTAGCAGCCTGTCCATTTCGGAAAATGTCGAATTTTACATCTAATAAGACGATAATGAGTATTGCAGCAAATTCAAGTAGACTTCATGTCATAGACTTTGGCATTCTTTATGGATTTCAATGGCCAACCCTTATTCAGAGACTCTCATGGAGAAAAGGCGGTCCTCCGAAGCTTCGAATCACCGGAATTGAGTTTCCCCAACCGGGTTTTCGACCAGCTGAGCGAGTGGAGGAAACGGGCCGTCGTTTGTCGGCGTATGCAGAAACTTTCAAGGTGCCGTTCGAGTACAATGCCGTAGCAAAAAACTGGGAGACTGTTACCATTGACGATCTCAAGATAGAAGGTGACGAAGTCTTGGTCGTCAACTGCCTGTACCGAGCAAAGAACTTGCACGATGAAAGTGTGGCAGTGGAAAGTGCCCGAAATAAGTTTCTTCAAGTTGTACGCAAAATAAATCCGAACATCTTCATCTTCGGTGCTGTCAACGGTTCGTATAATGCCCCCTTCTTCGTTACTCGTTTTCGAGAGGCACTCTTCCACTATTCTGCGCTGTTTGACATGCTTGAAACTGTCGTCCCGAGGGAGGATGGAGAGAGAATGTTGATCGAGAAGGAAATCTTTGGTCGAGAAGCTTTGAATGTTATTGCATGCGAAGGCTGGGAGAGAGTCGAAAGACCAGAGACCTATAAGCAGTGGCAGGTTCGAATCATGAGGGCCGGATTCTTGCAGCTTGAAGTACACAGAGAGATTATAAAGGGTGCAAAGGAGAAAGTAAACACAAGTTACCACAAGGATTTTGTAATCGACGAAGATAGCAAATGGATGCTACAGGGATGGAAGGGAAGAACTATATATGCCCTCTCTGCTTGGAAACCTGTTTAG 2235 43.76 MDPRCKGYSYSIKDIQLGNQSLLVHPHPNAVVGPRFEKALLDHRVDEFHYHPPDPPPSNVVSSSSNITSCSSASQDENSPEDCDFSDAVLGYISQILMEEDMEEKTCMLQDSLDLQAAEKSFYDVLGEKYPPHDQNRPYSSQYNEILDDNSFGDYYNYLTNIYGESAYFGYDTHNQLVEDFSQMDSLPSRVIDQSVYSSSNSVISNFDGLVESSNSSFSIPESSNRSQSIWQFRKGVEEANKFLPDENGLFLNQGPEAGEVIVKVEAREGDESLPRESRGRKNPLRGDGDLEEKRSNKLAAIFDDSTLRSEMFDNVLLCSAGEGMRKLAALRDYLQKAKRRSLEQNGQTKGYNGGRGRWKKQNRKKEVVDLRTLLIHCAQAVAADDHRNANELLRQIRQHASPFGDGNQRLANCFAEGLESRLAGIGSQIYKGLVSKRRCAADLLKAYHLFLAACPFRKMSNFTSNKTIMSIAANSSRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLSAYAETFKVPFEYNAVAKNWETVTIDDLKIEGDEVLVVNCLYRAKNLHDESVAVESARNKFLQVVRKINPNIFIFGAVNGSYNAPFFVTRFREALFHYSALFDMLETVVPREDGERMLIEKEIFGREALNVIACEGWERVERPETYKQWQVRIMRAGFLQLEVHREIIKGAKEKVNTSYHKDFVIDEDSKWMLQGWKGRTIYALSAWKPV 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 52319520 52321754 - Bda017969.1 Bda03g01464 4723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01464 744 MobiDBLite consensus disorder prediction 266 291 - -
Bda03g01464 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 743 IPR005202 -
Bda03g01464 744 ProSiteProfiles GRAS family profile. 362 742 IPR005202 -
Bda03g01464 744 MobiDBLite consensus disorder prediction 341 361 - -
Bda03g01464 744 PANTHER SCARECROW-LIKE PROTEIN 9 40 743 - -
Bda03g01464 744 MobiDBLite consensus disorder prediction 48 82 - -
Bda03g01464 744 MobiDBLite consensus disorder prediction 60 79 - -
Bda03g01464 744 Pfam GRAS domain family 371 742 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01464 Bda-Chr3:52319520 Bda14g00135 Bda-Chr14:943576 0 dispersed
Bda03g01462 Bda-Chr3:52268244 Bda03g01464 Bda-Chr3:52319520 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15745 PF03514 GRAS 1.80E-121 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01464 - - cit:102622070 938.332