Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01478 ATCATGGGTGCGATAGGGGCCGCCATGGCTGACGGAGTGCTGACGTTTATGTGGATTTTTTGTGCTTCCTCGATTGGGGCTCTTACTGCCGTCGTGTCCTCCGCCGTAGGAGTTTCCGGCCTTCCTCTCCCTTCCATATTCATAACTACTGTCATTATTTTCCTTCTCGTCTTCTTTTTCAACTTCGTCGGCAGCCTCTTGGGTGGGGCTAGCTTCAATCCCACCGGAACCGCCGCCTTCTACGCTGCCGGCCTTGGCCCCGATTCTCTAATTTCCATGGCCCTTCGCTTTCCTGCTCAGGCTGCCGGAGCTGTCGGTGGTGCGCTAGCGATCAAGGAGGTGATGCCGACAGAGTACAAACACATGCTTGGCGGTCCTTCTCTGAAAGTTGAGGTCCATTCCGGAGCCATAGCCGAGGCAATTTTGACGTTTTTCATTAGCTTGGCCGTCCTTCTGATCGTGCTCAGAGGCCCCCGCAGCCCGCTTCTCAAGGCCTGGTTTCTGGCCATGACCACCGTTACCTTGCTCATTTCTGGATCTTCTTATACAGGACCTTCCATGAATCCTGCAAATGCCTTTGGGTGGGCCTATGTGAACAACAGGCACAATTCCTGGGAGCACTTTTACGTCTACTGGATCAGCCCCTTTGCCGGTGCAATTACAGCCGCGTGGGTGTATCGGGCGGTGTTTGCTGCAGCGGCGCCAGTGAAACAGAAGAAAGCCTGA 726 54.68 IMGAIGAAMADGVLTFMWIFCASSIGALTAVVSSAVGVSGLPLPSIFITTVIIFLLVFFFNFVGSLLGGASFNPTGTAAFYAAGLGPDSLISMALRFPAQAAGAVGGALAIKEVMPTEYKHMLGGPSLKVEVHSGAIAEAILTFFISLAVLLIVLRGPRSPLLKAWFLAMTTVTLLISGSSYTGPSMNPANAFGWAYVNNRHNSWEHFYVYWISPFAGAITAAWVYRAVFAAAAPVKQKKA 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 52936262 52937826 + Bda017987.1 Bda03g01478 4737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01478 241 PANTHER AQUAPORIN SIP1-1 2 240 - -
Bda03g01478 241 SUPERFAMILY Aquaporin-like 5 232 IPR023271 -
Bda03g01478 241 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda03g01478 241 PANTHER AQUAPORIN SIP1-1 2 240 IPR044222 GO:0015250
Bda03g01478 241 Gene3D Glycerol uptake facilitator protein. 3 240 IPR023271 -
Bda03g01478 241 Pfam Major intrinsic protein 6 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01478 Bda-Chr3:52936262 Bda15g00387 Bda-Chr15:6795935 3.00E-10 dispersed
Bda03g01478 Bda-Chr3:52936262 Bda05g01255 Bda-Chr5:60364200 4.16E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01478 K09875 - csv:101220534 310.457