Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01478 | ATCATGGGTGCGATAGGGGCCGCCATGGCTGACGGAGTGCTGACGTTTATGTGGATTTTTTGTGCTTCCTCGATTGGGGCTCTTACTGCCGTCGTGTCCTCCGCCGTAGGAGTTTCCGGCCTTCCTCTCCCTTCCATATTCATAACTACTGTCATTATTTTCCTTCTCGTCTTCTTTTTCAACTTCGTCGGCAGCCTCTTGGGTGGGGCTAGCTTCAATCCCACCGGAACCGCCGCCTTCTACGCTGCCGGCCTTGGCCCCGATTCTCTAATTTCCATGGCCCTTCGCTTTCCTGCTCAGGCTGCCGGAGCTGTCGGTGGTGCGCTAGCGATCAAGGAGGTGATGCCGACAGAGTACAAACACATGCTTGGCGGTCCTTCTCTGAAAGTTGAGGTCCATTCCGGAGCCATAGCCGAGGCAATTTTGACGTTTTTCATTAGCTTGGCCGTCCTTCTGATCGTGCTCAGAGGCCCCCGCAGCCCGCTTCTCAAGGCCTGGTTTCTGGCCATGACCACCGTTACCTTGCTCATTTCTGGATCTTCTTATACAGGACCTTCCATGAATCCTGCAAATGCCTTTGGGTGGGCCTATGTGAACAACAGGCACAATTCCTGGGAGCACTTTTACGTCTACTGGATCAGCCCCTTTGCCGGTGCAATTACAGCCGCGTGGGTGTATCGGGCGGTGTTTGCTGCAGCGGCGCCAGTGAAACAGAAGAAAGCCTGA | 726 | 54.68 | IMGAIGAAMADGVLTFMWIFCASSIGALTAVVSSAVGVSGLPLPSIFITTVIIFLLVFFFNFVGSLLGGASFNPTGTAAFYAAGLGPDSLISMALRFPAQAAGAVGGALAIKEVMPTEYKHMLGGPSLKVEVHSGAIAEAILTFFISLAVLLIVLRGPRSPLLKAWFLAMTTVTLLISGSSYTGPSMNPANAFGWAYVNNRHNSWEHFYVYWISPFAGAITAAWVYRAVFAAAAPVKQKKA | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 52936262 | 52937826 | + | Bda017987.1 | Bda03g01478 | 4737 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01478 | 241 | PANTHER | AQUAPORIN SIP1-1 | 2 | 240 | - | - | |
Bda03g01478 | 241 | SUPERFAMILY | Aquaporin-like | 5 | 232 | IPR023271 | - | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 169 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 92 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 209 | 229 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 53 | 77 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PRINTS | Major intrinsic protein family signature | 138 | 156 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda03g01478 | 241 | PANTHER | AQUAPORIN SIP1-1 | 2 | 240 | IPR044222 | GO:0015250 | |
Bda03g01478 | 241 | Gene3D | Glycerol uptake facilitator protein. | 3 | 240 | IPR023271 | - | |
Bda03g01478 | 241 | Pfam | Major intrinsic protein | 6 | 226 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01478 | Bda-Chr3:52936262 | Bda15g00387 | Bda-Chr15:6795935 | 3.00E-10 | dispersed | |
Bda03g01478 | Bda-Chr3:52936262 | Bda05g01255 | Bda-Chr5:60364200 | 4.16E-124 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01478 | K09875 | - | csv:101220534 | 310.457 |