Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01493 ATGGAGTTGTTACAGTCATTGGACGTTCAGACTCTTCTGGGTTTAGCTGTAGCTCTTCTAGCCATTGGAGCTGGAGCTCTCTATCTCCTCTTCTTTTCCAAGAAATCAACATCTAGAGGCTGCTTAGACCCTGAGAGATTCAAGGAGTTTAAACTTATAAAGCGCACAAAGCTGAGCCATAATGTGGCAAAATTTACATTTGCTCTACCAAAACCAACATCAATTTTGGGTCTTCCCATTGGACAACACTTGAGTTGCAGAGGCAAAGACAGTCAGGGAGAAGAGGTTATTAAACCATATACTCCTACCACTTTGGACTCTGATGTAGGATATTTTGAACTGGTCATAAAAATGTATCCTCAAGGAAGAATGTCACACCATTTTAGAGAGATGCGAGTCGGGGATCATCTTTCTGTCAAGGGACCAAAGGGACGTTTCAAGTATCGACCTGGTCAAGTTAGAGCATTTGGAATGCTTGCTGGTGGCTCTGGCATTACACCAATGTTCCAAGTAGCTCGTGCAATACTAGAGAACCCGGATGACAAAACAAACGTACACCTCATATATGCCAATGTTACATATGAAGATATACTTTTGAAGGAAGAGATTGATTTGCTTGCCTCTAGATATCCAGATCGCTTCAAGATCTACTATGTCTTGAATCAGCCTCCCGAGATCTGGGACGGAGGTGTCGGTTTCGTATCGAAGGAAATGATTCAAACCCACTGCCCTGCACCCGGAGCCGATATTCAGACTTTATCGAAAAAAAAATTCCACCCTGGCTGTATTAGGCTTGAACCGGCCGTGGGCTGCAGACCAGTTGGTGACCTTGAATGTTTTTTTTTCATGATACGGACCATATTAGTTGAACCAACCACTGGAAATACGGGACTTGGTATTGCTTTTATTGCAGCAACTAAGGGTTATAAACTAATTGTAACCATGCCTGCATCCATCAATGTTGAAAGGAGGATCCTATTGCGCGCATTTGGTGCAGACATAGTTTTGACTGATCCCGAGAAAGGTCTACAAGGGGCTATTGATAAAGCTGACGAGATAGTTCATAGCACATCAAATGCTTACATGTTTCAACAGTTTGACAATGTTGCTAATACAAAGATCCACTTTGAAACAACTGGACCAGAGATATGGGAGGATACCATGGGCAATGTTGACATATTTGTCGCTGGGATTGGCACTGGTGGTACAATTACAGGCACTGGGCGATACTTGAACACGATGAACAAAGAAATTAAGATAGTGGGTGTTGAACCAGCGGAGAAAAGTGTAGTCTCAGGAGGAAGTCCAGGTTATGTGTCAAGCATTATGGATGTTAAATTGCTTGATGAGGTGATCAAGGTTACTAATGAAGAAGCTGTAGAAGTGGCCAGGAGATTAGCGTTGGACGAAGGATTACTGGTAATTATCATGGTCTAA 1437 42.73 MELLQSLDVQTLLGLAVALLAIGAGALYLLFFSKKSTSRGCLDPERFKEFKLIKRTKLSHNVAKFTFALPKPTSILGLPIGQHLSCRGKDSQGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDHLSVKGPKGRFKYRPGQVRAFGMLAGGSGITPMFQVARAILENPDDKTNVHLIYANVTYEDILLKEEIDLLASRYPDRFKIYYVLNQPPEIWDGGVGFVSKEMIQTHCPAPGADIQTLSKKKFHPGCIRLEPAVGCRPVGDLECFFFMIRTILVEPTTGNTGLGIAFIAATKGYKLIVTMPASINVERRILLRAFGADIVLTDPEKGLQGAIDKADEIVHSTSNAYMFQQFDNVANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTITGTGRYLNTMNKEIKIVGVEPAEKSVVSGGSPGYVSSIMDVKLLDEVIKVTNEEAVEVARRLALDEGLLVIIMV 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 53238692 53250153 - Bda018006.1 Bda03g01493 4752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01493 478 Gene3D Translation factors 40 138 - -
Bda03g01493 478 Gene3D - 368 474 IPR036052 -
Bda03g01493 478 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 253 - -
Bda03g01493 478 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 250 IPR039261 -
Bda03g01493 478 Pfam Oxidoreductase NAD-binding domain 158 245 IPR001433 GO:0016491
Bda03g01493 478 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Bda03g01493 478 CDD cyt_b5_reduct_like 50 249 - -
Bda03g01493 478 Gene3D - 139 254 IPR039261 -
Bda03g01493 478 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Bda03g01493 478 Pfam Pyridoxal-phosphate dependent enzyme 286 474 IPR001926 -
Bda03g01493 478 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 253 IPR001834 GO:0016491
Bda03g01493 478 Gene3D - 285 367 IPR036052 -
Bda03g01493 478 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 287 474 IPR036052 -
Bda03g01493 478 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Bda03g01493 478 PRINTS Cytochrome B5 reductase signature 76 87 - -
Bda03g01493 478 PRINTS Cytochrome B5 reductase signature 157 176 - -
Bda03g01493 478 PRINTS Cytochrome B5 reductase signature 98 105 - -
Bda03g01493 478 PRINTS Cytochrome B5 reductase signature 134 148 - -
Bda03g01493 478 PRINTS Cytochrome B5 reductase signature 195 206 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01493 Bda05g00993 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01493 Bda-Chr3:53238692 Bda09g01304 Bda-Chr9:44872317 4.98E-128 dispersed
Bda11g00134 Bda-Chr11:1834176 Bda03g01493 Bda-Chr3:53238692 1.07E-47 dispersed
Bda13g01500 Bda-Chr13:38038976 Bda03g01493 Bda-Chr3:53238692 1.45E-41 dispersed
Bda03g01493 Bda-Chr3:53238692 Bda05g00993 Bda-Chr5:58358234 2.78E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01493 K00326 - csv:101212569 419.853