Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01496 AGCTGCAAGAGTTTTCAGAATCTAGACGACTACAATGCCAAGTGTTTTCGTCTTCAATCCAGTAACCCTTGTGTCTCCCAAGGCTATATCGACTATCTTTATCTTTTCTACTGCAACTTTGAGAGCTTTCCTTTTCTGGGTTATCTTCTTCTCTTCCTCTGGCTTTTAGTTCTGTTCTATGTGCTGGGTAATACAGCTTCTGAATACTTCTGTTCTTCGCTGGAAAGCCTGTCTAATTTAATGAAGTTATCACCCACCATAGCCGGCGTGACCTTGCTTTCTCTCGGAAATGGCGCCCCTGACGTTTTCTCTAGCCTTGTTGCTTTCATGGGCAAAGGCACTAATGAAATTGGCCTGGATTCAGTCCTTGGAGGCGCCTCCTTCGTTACCTGTGTAGTGGTCGGAATCATAAGTGTTTTGCTTCGCCGGAGAGAAATTCAGGTCGAAAAATTCGCTTTAATCAGAGATATTTGCTTCTTCATCCTAGTTTTGTTATCTGTCTTAGTCATAATGATTCACGGCGAAATTAGACTATGGGGGGCTATTGCCTTTTCTTCAATGTACATTCTTTACGTGGTCTTCGTTTCTGTTTCTCGGGCAGAATCGACTCGTGCCGAAGAAGACCCCGAAAGGAGTAGTGATTTGAGAGCACCAATTCTAAATGAGAAAGAGAAGGAAGAAGAAGAAGAAGATTGCATAGAAGGCGCAATCTTTCCAATAACACCATCACCTTCTTGCCTTACCTTCCTTAGAATTCTTGATCTCCCCCTCTACCTGCCAAGAAGATTGACAATTCCAGTTATTTCCGACGATAAATGGTCAAAATTTTTCGCGGTTTCTTCGGTGTTTCTTGCTCCGATTCTTCTGTCAGCTCTTTGGGCATCTCAAAATGATTCCTACACATCCAAGCAAGACTTGGTGACCTATGGAGTTGGATTTCTGGCAGGATTGTTCTTGGCAACTCTTGCATTTTTCACAACAGAGAGCTTAAACCCACCAAGTAAATGCTTATTTCCATGGCTATTAGGAGGTTTTCTAATGAGCATAACATGGAGTTACATCACAGCTCAAGAGTTAGTGGGTTTGCTTGTTTCAATAGGATATATAATTGGAGTAAGCCCTTCAATTCTAGGACTCACTGTCCTGGCATGGGGAAACTCACTTGGAGATCTCATTGCAAATTCAGCAATGGCCATAAATGGTGGACAAGAAGGAGCCCAAATAGCCATTTCAGGCTGTTATGCTGGTCCTATATTTAATGTCCTGTTTGGATTAGGGTTGTCTCTCGTAGGAGCTGCTTGGAGTTCATATCCATTGCCTGTTGAGATACCAAACAGTGCTCATCTTTGGAGAACAATGGGGGTTCTGATTGCAGGCTTGTTGTGGGCTCTTTTGGTGTTGCCAAGTAGGAAAATGAAACTTGATGGAGTTTTAGGAGGAGGGCTTCTGTTGTTGTACTTGATTTCTCTGTCTTTGATGTTGGTACAAATCCTGGTAAGCAATTGA 1506 42.76 SCKSFQNLDDYNAKCFRLQSSNPCVSQGYIDYLYLFYCNFESFPFLGYLLLFLWLLVLFYVLGNTASEYFCSSLESLSNLMKLSPTIAGVTLLSLGNGAPDVFSSLVAFMGKGTNEIGLDSVLGGASFVTCVVVGIISVLLRRREIQVEKFALIRDICFFILVLLSVLVIMIHGEIRLWGAIAFSSMYILYVVFVSVSRAESTRAEEDPERSSDLRAPILNEKEKEEEEEDCIEGAIFPITPSPSCLTFLRILDLPLYLPRRLTIPVISDDKWSKFFAVSSVFLAPILLSALWASQNDSYTSKQDLVTYGVGFLAGLFLATLAFFTTESLNPPSKCLFPWLLGGFLMSITWSYITAQELVGLLVSIGYIIGVSPSILGLTVLAWGNSLGDLIANSAMAINGGQEGAQIAISGCYAGPIFNVLFGLGLSLVGAAWSSYPLPVEIPNSAHLWRTMGVLIAGLLWALLVLPSRKMKLDGVLGGGLLLLYLISLSLMLVQILVSN 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 53329502 53331007 + Bda018013.1 Bda03g01496 4755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01496 501 MobiDBLite consensus disorder prediction 205 223 - -
Bda03g01496 501 Gene3D - 83 206 IPR044880 -
Bda03g01496 501 Gene3D - 274 496 IPR044880 -
Bda03g01496 501 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 498 - -
Bda03g01496 501 PANTHER CATION/CALCIUM EXCHANGER 2 1 498 - -
Bda03g01496 501 MobiDBLite consensus disorder prediction 205 226 - -
Bda03g01496 501 Pfam Sodium/calcium exchanger protein 52 195 IPR004837 GO:0016021|GO:0055085
Bda03g01496 501 Pfam Sodium/calcium exchanger protein 341 494 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00550 Bda-Chr3:4570802 Bda03g01496 Bda-Chr3:53329502 1.59E-128 dispersed
Bda03g01496 Bda-Chr3:53329502 Bda09g01061 Bda-Chr9:40818150 4.07E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01496 K13754 - csv:101204766 560.836