Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01511 ATGGAAGAAAAAGGTTGTTTTGGCAATTTTGTGGAGAGAGCCAAACCTTACATCGCCATGATTTGTCTTCAGTTTGGCTATGCCGGCATGAATATAATCACCAAGGTTTCTCTTAATCGAGGAATGAGCCACTACGTTCTGGTTGTTTACAGACATGCTTTCGCTACTGCCGCCATAGCTCCTTTTGCTTTTGTTCTTGAAAGGAAAGTTAGACCCAAGATCACATTCCCCATTTTCATGCAGCTTTTTGTTCTGGGTCTTCTTGGAATATCCAGGAAATTTAACCTTTTCTTCTATCGAACTTACAGGCCGGTGATTGATCAAAACTTCTATTACGCTGGACTAAAGTTCACCTCCCCCACCTTCTCCTGCGCCATGAGCAACATGCTTCCTGCAATGACATTTGTCATGGCTCTCATTTTCAGAAGGATGGAGATATTGGACGTGAAGAAACTAAGGTGTCAAGCAAAATTAATAGGAACAGTAGTGACAGTTGGTGGGGCCATGTTGATGACGTTATACAAAGGCCATGTCGTGAATTTCTTCTGGTCTGATCATCTTCACCATATCAACTCCTCTGGAGGTTCAGAAAGTGGGAATGGTGATAAAGATTGGGTTAAAGGATCCATTCTTCTGATTATTGCTACTCTTGCATGGGCTTCCTTTTTCATTCTTCAGGCTATAACGTTGAGAAGATATACAGCTCAGCTTTCACTTACTTCTCTGGTTTGCTTTATGGGGACTCTTCAATCCATTGGTGTTACCCTTGTAATGGAACGTAAGCCTTCTGCTTGGGCCATCGGGTGGGACATCGCTGCAGCCTATCTTCTCTCCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCATCATCATCTCTCCTCTCTGAATGAGCAGGGGATAGTGTCATCTAGCATTGCATACTATGTTCAAGGGTTGGTGATGCAGAAGAGAGGGCCAGTCTTCGTTACAGCATTCAGTCCTTTGATGATGATAATAGTTGCTGTAATGGGTTCTTTCATTCTTGCCGAGAAGATCTACCTTGGAGGGATTCTTGGAGGTGCGCTGATAGTAATGGGGCTGTACGCAGTTCTGTGGGGGAAGTACAAAGAACACAAAGAGAAGGAAGCTGAGGAAGCCATTGTTGATCCAGTAAAAACTGGAGAAAATGGGAAGGCTATAGAGAAGATGGAAGAAGTCGATGACATAGAAATGCAGAAGAATAAAAACGTGTTCACTCCAATGGTTCCCGTTAGTTTTCCAGTGCCTCAGCCTCCCATGTTCGCCAAGGAAGCTCCGAGGTCTTAG 1359 44.37 MEEKGCFGNFVERAKPYIAMICLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAFVLERKVRPKITFPIFMQLFVLGLLGISRKFNLFFYRTYRPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMALIFRRMEILDVKKLRCQAKLIGTVVTVGGAMLMTLYKGHVVNFFWSDHLHHINSSGGSESGNGDKDWVKGSILLIIATLAWASFFILQAITLRRYTAQLSLTSLVCFMGTLQSIGVTLVMERKPSAWAIGWDIAAAYLLSSLSLSSLSLSLSLSLSLSLSLSLSLSLTHHHLSSLNEQGIVSSSIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAVMGSFILAEKIYLGGILGGALIVMGLYAVLWGKYKEHKEKEAEEAIVDPVKTGENGKAIEKMEEVDDIEMQKNKNVFTPMVPVSFPVPQPPMFAKEAPRS 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 53576155 53578022 - Bda018032.1 Bda03g01511 4770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01511 452 PANTHER WAT1-RELATED PROTEIN 10 275 IPR030184 GO:0016021|GO:0022857
Bda03g01511 452 PANTHER WAT1-RELATED PROTEIN 316 417 IPR030184 GO:0016021|GO:0022857
Bda03g01511 452 PANTHER WAT1-RELATED PROTEIN 10 275 - -
Bda03g01511 452 PANTHER WAT1-RELATED PROTEIN 316 417 - -
Bda03g01511 452 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01511 Bda-Chr3:53576155 Bda14g00333 Bda-Chr14:2320587 3.02E-173 dispersed
Bda03g01511 Bda-Chr3:53576155 Bda14g00309 Bda-Chr14:2083309 2.76E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01511 - - twl:120013664 565.459