Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda03g01554 | ATGGAGGATGCTTCAAATAAAAGTCTTTACGATTTTCATTTGACGCTCGCATCAAGAAAAGCTGAAGAAGCAGCTTGGAGGCGATATGAAGCTTCAAGGTGGCTGCAAAGTTTAGTTGGTCCCGTTGTTGAAAATCCATCAACTTCACAATCAATATCCCGCGAATTTCAACCATTGCCGGCCTATCAGTACTTTGAGAATGTCAGAAACTTTTTGGTCGCCATGGAAGAGTTGGAGCTTCCTGCTTTTGAAGCTTCTGATCTAGAAAGGGAGACATTAGACTCAGGATCAACAGCGAAGGTTGTGGACTGTATATTAGCTCTTAAATCTTTTTACGAGTGGAAGAAGATGAACAATGGAAATGGGTTTTACAAACATGTGAAATCTCCTATGGCTGTGCATTCTGCTAGTAGAATTCATTCGAGACCTCCACTATCGTATTCATCAGACCCTTGTCGGCGCTTGGAGATGTCTGCAATAAGTGAAAAACAGACAGCTTTTAAAATTGAAAATGGGAACCTTGAAGAATTAATCGTCAAGTCACTTGTTGATTGTTTGGTAGACAAAAAGGAAAACATTGATGGCAATCTTCTCGCTTCCTTACGAAATCGAGATATGGATGGAGTTAGTCAACTTAGGAAGATTATGTCAAGATGTTTGGAAGAACAACTTCAAGAAAAGCTTCCTGAGGTTAGTCTGATTTCAATAGTTTTCAACTCCTTTTCTGGGTTGCCATTTTATCAGGATAAAAGCAGCCACCACCTCCAGTTATTTCAAACGCAAGAGAAGGAACTCATGAACCTGAAATCCTTATATTCTAGAGCAAAAAAAGAGTTTGTCGACATGCAATCACAGTTGCAGAGAGATCTGCAATACCTAGGAAGTCAGGTTCAGGAGCTGTCTTCTGCAGCCCTTGGTTATCACAGGGTAGTTCAAGAGAACAGAAACTTATACAATATGGTTCAAGATCTGAAGGGTAACATACGAGTTTACTGCAGAATTAGGCCATCCTCGAACATAGAAAGCAAAAACACGATAGATTTTATAGGAGAGGACGGCTCGATGGTTATCTCGGACCCGTCAAACCCACAAAGGGATGGCAAAAAACTTTTCCAGTTCAATAGGGTGTTTGCGCCGAATGCTACACAAGGTGATGTGTTTAAGGATACTCAGCCATTGATAAGGTCTGTCATGGATGGTTACAATGTCTGCATATTCGCTTACGGTCAAACCGGCTCAGGAAAAACACATACAATGAGTGGTCCAAGTCACAAATTAGAGATTAGAAGTTGCGCAAAAGACAACGGCTTGACTCTCCCGGACGCGACAATTCATTGTGTTAAGTCTACAGCTGATGTTATTAACCTGATGAAGATCGGCGGGGGAAATCGTGTGATCAGCGCCACCGCCATGAACAACCGGAGCAGTCGCTCCCACAGGCAAGTATTTGAGAATAGTATGCATATAATGGAGACGAACAGTACTTTCTGCAAATTACTGAGTCGATTTGTTTTGAATGGCGTTAGTATTTTGACCGTGCATGTGCATGGAGAAGACTCGGCCGGAAACAATCTACGTAGCTGTTTGCATCTGATAGACCTCGCCGGAAGTGAGCGGGTGGACAGATCGGAAGTCACCGGAGATAGGCTGAAGGAGGCTCAGTATATCAACAGGTCTCTCTCTTGCCTAGGAGACGTGATCACGGCCTTGGCGCATAAGAATTCTCACGTTCCGTACAGGAATAGCAAGCTCACTCTCCTACTGCAGGATTCGTTGGGTGGGCAAGCCAAGACTTTGATGTTCGCCCATGTTAGTCCGGAAGAAGATTCCTTCAATGAAACAATCAGCACTTTGAAGTTCGCTCAACGAGTTTCGTCGGTCGAGCTCGGCGCTGCTCGGATGAACAAGGAGAGCTCAGAAATCAGACAACTTAAAGAACAGGAAAAAATTCGGGTTGCTCTCTATGTTCAGAAGGCAGCATTGCAGTTTATTGATGCGGGTGGTCGATCTGAATACGTTCTCTTGGATGAGACTAGAGAAGCAGGTTTTAATATTAATCCAGACGAACTTGCATCAATAGTCCGAAACCATGATTTTAAGGCCTTTAGATCACACGGCGGAACTGAAGGGATTGCTAGGAGAGTGTCTGTTTCGCTGAATACTGGTGTCAGTGAGAAGCATGTAGCTTTACGACAGAAGATTTATGGCATTAACCGCTACAAGGAAAAACCTTCAAAATCATTTTTAATGTTTTTGTTCGAAGCATCGCAAGACTTGACACTTATAATACTCATGGTCTGTGCCGTAGTTTCCTTAGGCGTTGGAATCGCCACTGAAGGATTGCCACGGGGAATGTATGATGGTATAGGGATCTTATTCAGTATATTTTTGGTGGTCTTAGTTACGTCTGTTAGCGACTACAAACAGTCCTTGCAATTCAAAGAGCTGGACCGGGAGAAGAAAAAAATATTTATCGATTTAAGTAGAGATGGATCAAGAAAAAGGGTCTCCATTTATGATGTAGTTGTTGGAGATATAGTTCATTTATCAATTGGAGATCAAGTTCCAGCTGATGGAGTTTTTGTATCAGGATACAGTTTGCTCATTGACGAATCAAGCTTGTCAGGAGAGACTGAACCAGTGAACATATATGAAGAGAAACCATTTCTTCTTGCAGGTACTAAAGTGCAAGATGGGTCTGCAAAAATGCTGGTGACAGCAGTCGGTATGAGAACTGAATGGGGAAAGTTGATGGAAACCCTGAATGAGGGAGGAGAAGATGAGACTCCATTGCAGGTGAAGTTAAATGGCGTTGCAACGCTTGTTGGAAAAATTGGTTTGACCTTTGCTGTGGTGACATTGTTGGTGTTGATAGTGAGGTTTCTGTTTGAAAAATACCTGCAACACACTCTAGGATATTGGTCTTCAAGTGATGCACTTCAGCTTCTTAACTTCTTTGCAATAGCTGTGACCATAGTTGTTGTTGCAGTTCCTGAAGGATTACCACTGGCAGTGACACTTAGTCTTGCGTTCGCTATGAAGAAATTAATGGATGAAAAAGCACTTGTGAGGCATCTCTCTGCATGTGAGACAATGGGTTCTGCTAGTTGTATTTGCACAGACAAGACAGGGACATTGACCACTAATCATATGGTTGTAGATAGAATATGGATTTGTGGAAAATCTATTGGGATTAAACGCAATGAGAGTAATGGAGTTCTGAGATCAGAGATATCTGACGGCATTATGAACATCCTTCGGCAGTCTATTTTCCAAAATACAAGTTCTGAAGTGTCAAAAGATAAAGATGGACAGAACTCTATTGTGGGAGGATCTCCAACGGAATCAGCATTGTTAGAATTTGGCTTGCTTCTAGGTGGCGATTTTGATGCCCTGCGAAGAGAATTTAAAATACTTAAGATTGAGCCTTTCAATTCTGTCAGGAAGAAGATGTCCGTTCTCGTCGCTCTTCCTGATGGCGGAACACGAGTTTTTTGCAAAGGGGCATCAGAAATAATTTTAAGAATGTGTGACAAGATTGTTGATGACAATGGAAATGCTGCTCAGTTAACTGAAGAACAGGTAAGAACTGTCTCAGACACTATCAATGGTTATGCTTCTGAAGCACTGAGAACCATAGGTTTGGCTTTTAAAGATACAGATTACTCTTCCAATGGAAATTCATTTCCAGATAGTGGCTTCACATTTGTGGCAGTTGTTGGAATCAAGGATCCTGTGCGTCGTGGAGTGAAGGATGCAGTCAAAACTTGTTTGGACGCTGGAATAACCGTTCGAATGGTCACAGGTGATAACTTACATACAGCTAAGGCCATAGCTAAAGAATGTGGCATCCTTACACCAGACGGTTTGGCCATCGAAGGACCGGATTTTCGTAACTTGTCTCCTGTGCAGATGAAGGAAATTATCCCCAAACTCCAGGTAATGGCTCGATCATTGCCATTGGATAAGTATACTTTGGTTTCCAATCTGAGAAAAACATTTGGCGAGGTTGTTGCAGTGACAGGAGACGGGACAAATGATGCCCCTGCCTTGCATGAGTCAGACATTGGATTGGCTATGGGCATTGCTGGTACCGAGGTTGTTGCCAAAGAAAATGCTGATGTTATCATAATGGACGATAATTTTGCGACTATTGTAAATGTTGCCAAATGGGGACGCTCAGTTTATATCAACATTCAAAAGTTTGTGCAGTTTCAGCTAACAGTAAACATTGTTGCTCTGGTGACCAATTTTGTTTCGGCGTGCATTTCAGGATCTGCTCCTCTAACTGCTGTGCAATTGCTTTGGGTCAACTTAATTATGGACACTCTTGGTGCATTGGCACTTGCCACGGAGCCTCCAAACGATGCTCTAATGAAAAGACGCCCTGTACTTAAGGGTATGAGTTTCATTACCAAAACCATGTGGAGGAACATTATTGGCCAAAGCATTTATCAGCTAGCTGTTCTTGGTGTTCTTAATTTTGCTGGAAAGAAACTTTTAGGACTTGGTGGCTCTGATGCCACTGATGTTCTGAACACTTTGATATTCAACGCATTCGTGTTTTGTCAGGTGTTTAATGAAATAAACAGCCGTGAAATTGAGAATATCAACATTTTCCGTGGCTTGTTCAACAACTGGATATTCATCGCTATTGTAGTCTCAACAGCTGCATTTCAAGTGATAATCGTCGAATTTTTAGGCGATTTTGCAAGCACAGTGCCGCTTAGCTGGAAATTTTGGGTACTAAGTATAGTGATTGGATTTGTTAGCATGCCTATTGCTGTAGTCTTGAAATGCATCCCAGTTGAAAGAACTTCAACCAAGCATCACGACGGTTACGATCCACTGCCTTCCGGCCCGGAATTGGCTTGA | 4875 | 42.36 | MEDASNKSLYDFHLTLASRKAEEAAWRRYEASRWLQSLVGPVVENPSTSQSISREFQPLPAYQYFENVRNFLVAMEELELPAFEASDLERETLDSGSTAKVVDCILALKSFYEWKKMNNGNGFYKHVKSPMAVHSASRIHSRPPLSYSSDPCRRLEMSAISEKQTAFKIENGNLEELIVKSLVDCLVDKKENIDGNLLASLRNRDMDGVSQLRKIMSRCLEEQLQEKLPEVSLISIVFNSFSGLPFYQDKSSHHLQLFQTQEKELMNLKSLYSRAKKEFVDMQSQLQRDLQYLGSQVQELSSAALGYHRVVQENRNLYNMVQDLKGNIRVYCRIRPSSNIESKNTIDFIGEDGSMVISDPSNPQRDGKKLFQFNRVFAPNATQGDVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSHKLEIRSCAKDNGLTLPDATIHCVKSTADVINLMKIGGGNRVISATAMNNRSSRSHRQVFENSMHIMETNSTFCKLLSRFVLNGVSILTVHVHGEDSAGNNLRSCLHLIDLAGSERVDRSEVTGDRLKEAQYINRSLSCLGDVITALAHKNSHVPYRNSKLTLLLQDSLGGQAKTLMFAHVSPEEDSFNETISTLKFAQRVSSVELGAARMNKESSEIRQLKEQEKIRVALYVQKAALQFIDAGGRSEYVLLDETREAGFNINPDELASIVRNHDFKAFRSHGGTEGIARRVSVSLNTGVSEKHVALRQKIYGINRYKEKPSKSFLMFLFEASQDLTLIILMVCAVVSLGVGIATEGLPRGMYDGIGILFSIFLVVLVTSVSDYKQSLQFKELDREKKKIFIDLSRDGSRKRVSIYDVVVGDIVHLSIGDQVPADGVFVSGYSLLIDESSLSGETEPVNIYEEKPFLLAGTKVQDGSAKMLVTAVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATLVGKIGLTFAVVTLLVLIVRFLFEKYLQHTLGYWSSSDALQLLNFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMDEKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDRIWICGKSIGIKRNESNGVLRSEISDGIMNILRQSIFQNTSSEVSKDKDGQNSIVGGSPTESALLEFGLLLGGDFDALRREFKILKIEPFNSVRKKMSVLVALPDGGTRVFCKGASEIILRMCDKIVDDNGNAAQLTEEQVRTVSDTINGYASEALRTIGLAFKDTDYSSNGNSFPDSGFTFVAVVGIKDPVRRGVKDAVKTCLDAGITVRMVTGDNLHTAKAIAKECGILTPDGLAIEGPDFRNLSPVQMKEIIPKLQVMARSLPLDKYTLVSNLRKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVVAKENADVIIMDDNFATIVNVAKWGRSVYINIQKFVQFQLTVNIVALVTNFVSACISGSAPLTAVQLLWVNLIMDTLGALALATEPPNDALMKRRPVLKGMSFITKTMWRNIIGQSIYQLAVLGVLNFAGKKLLGLGGSDATDVLNTLIFNAFVFCQVFNEINSREIENINIFRGLFNNWIFIAIVVSTAAFQVIIVEFLGDFASTVPLSWKFWVLSIVIGFVSMPIAVVLKCIPVERTSTKHHDGYDPLPSGPELA | 1624 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 54677413 | 54692543 | - | Bda018094.1 | Bda03g01554 | 4813 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda03g01554 | 1624 | Coils | Coil | 258 | 278 | - | - | |
| Bda03g01554 | 1624 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 698 | 1604 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Bda03g01554 | 1624 | SMART | Cation_ATPase_N_a_2 | 702 | 776 | IPR004014 | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | Calponin-homology domain, CH-domain | 19 | 122 | IPR036872 | - | |
| Bda03g01554 | 1624 | ProSiteProfiles | Kinesin motor domain profile. | 327 | 627 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | Pfam | Cation transporter/ATPase, N-terminus | 705 | 771 | IPR004014 | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 705 | 1604 | IPR023298 | - | |
| Bda03g01554 | 1624 | Gene3D | - | 1049 | 1245 | IPR023299 | GO:0000166 | |
| Bda03g01554 | 1624 | Pfam | E1-E2 ATPase | 827 | 1017 | - | - | |
| Bda03g01554 | 1624 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 1041 | 1047 | IPR018303 | - | |
| Bda03g01554 | 1624 | Pfam | Kinesin motor domain | 425 | 627 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | Pfam | Kinesin motor domain | 333 | 422 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | SMART | kinesin_4 | 325 | 635 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | SFLD | p-type atpase | 1021 | 1394 | IPR044492 | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 1046 | 1242 | IPR023299 | GO:0000166 | |
| Bda03g01554 | 1624 | Gene3D | - | 721 | 922 | - | - | |
| Bda03g01554 | 1624 | Gene3D | Kinesin motor domain | 427 | 660 | IPR036961 | - | |
| Bda03g01554 | 1624 | PRINTS | Kinesin heavy chain signature | 577 | 598 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | PRINTS | Kinesin heavy chain signature | 528 | 546 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | PRINTS | Kinesin heavy chain signature | 400 | 421 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Bda03g01554 | 1624 | Gene3D | - | 44 | 131 | IPR036872 | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | HAD-like | 1038 | 1447 | IPR036412 | - | |
| Bda03g01554 | 1624 | SFLD | C1.7: P-type atpase like | 1021 | 1394 | - | - | |
| Bda03g01554 | 1624 | Pfam | Cation transporting ATPase, C-terminus | 1427 | 1600 | IPR006068 | - | |
| Bda03g01554 | 1624 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 1307 | 1430 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Bda03g01554 | 1624 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 791 | 1062 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Bda03g01554 | 1624 | PANTHER | CATION TRANSPORTING ATPASE | 632 | 1610 | - | - | |
| Bda03g01554 | 1624 | Pfam | Cation transport ATPase (P-type) | 1093 | 1180 | - | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | Calcium ATPase, transduction domain A | 827 | 920 | IPR008250 | - | |
| Bda03g01554 | 1624 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 632 | 1610 | - | - | |
| Bda03g01554 | 1624 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 289 | 627 | IPR027417 | - | |
| Bda03g01554 | 1624 | CDD | P-type_ATPase_Ca_PMCA-like | 728 | 1475 | - | - | |
| Bda03g01554 | 1624 | Gene3D | - | 754 | 1601 | - | - | |
| Bda03g01554 | 1624 | Gene3D | - | 1036 | 1387 | IPR023214 | - | |
| Bda03g01554 | 1624 | Gene3D | Kinesin motor domain | 269 | 426 | IPR036961 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00182 | Bda-Chr3:1491857 | Bda03g01554 | Bda-Chr3:54677413 | 0 | dispersed | |
| Bda03g01554 | Bda-Chr3:54677413 | Bda11g01478 | Bda-Chr11:21500638 | 0 | dispersed | |
| Bda12g00432 | Bda-Chr12:5311088 | Bda03g01554 | Bda-Chr3:54677413 | 1.10E-152 | dispersed | |
| Bda07g00827 | Bda-Chr7:9759122 | Bda03g01554 | Bda-Chr3:54677413 | 2.19E-18 | transposed | |
| Bda12g00373 | Bda-Chr12:4278000 | Bda03g01554 | Bda-Chr3:54677413 | 0 | transposed | |
| Bda15g00987 | Bda-Chr15:18283285 | Bda03g01554 | Bda-Chr3:54677413 | 4.34E-88 | transposed | |
| Bda03g01554 | Bda-Chr3:54677413 | Bda05g01038 | Bda-Chr5:58817771 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda03g01554 | K01537 | - | jre:109010491 | 1488.78 |