Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01554 ATGGAGGATGCTTCAAATAAAAGTCTTTACGATTTTCATTTGACGCTCGCATCAAGAAAAGCTGAAGAAGCAGCTTGGAGGCGATATGAAGCTTCAAGGTGGCTGCAAAGTTTAGTTGGTCCCGTTGTTGAAAATCCATCAACTTCACAATCAATATCCCGCGAATTTCAACCATTGCCGGCCTATCAGTACTTTGAGAATGTCAGAAACTTTTTGGTCGCCATGGAAGAGTTGGAGCTTCCTGCTTTTGAAGCTTCTGATCTAGAAAGGGAGACATTAGACTCAGGATCAACAGCGAAGGTTGTGGACTGTATATTAGCTCTTAAATCTTTTTACGAGTGGAAGAAGATGAACAATGGAAATGGGTTTTACAAACATGTGAAATCTCCTATGGCTGTGCATTCTGCTAGTAGAATTCATTCGAGACCTCCACTATCGTATTCATCAGACCCTTGTCGGCGCTTGGAGATGTCTGCAATAAGTGAAAAACAGACAGCTTTTAAAATTGAAAATGGGAACCTTGAAGAATTAATCGTCAAGTCACTTGTTGATTGTTTGGTAGACAAAAAGGAAAACATTGATGGCAATCTTCTCGCTTCCTTACGAAATCGAGATATGGATGGAGTTAGTCAACTTAGGAAGATTATGTCAAGATGTTTGGAAGAACAACTTCAAGAAAAGCTTCCTGAGGTTAGTCTGATTTCAATAGTTTTCAACTCCTTTTCTGGGTTGCCATTTTATCAGGATAAAAGCAGCCACCACCTCCAGTTATTTCAAACGCAAGAGAAGGAACTCATGAACCTGAAATCCTTATATTCTAGAGCAAAAAAAGAGTTTGTCGACATGCAATCACAGTTGCAGAGAGATCTGCAATACCTAGGAAGTCAGGTTCAGGAGCTGTCTTCTGCAGCCCTTGGTTATCACAGGGTAGTTCAAGAGAACAGAAACTTATACAATATGGTTCAAGATCTGAAGGGTAACATACGAGTTTACTGCAGAATTAGGCCATCCTCGAACATAGAAAGCAAAAACACGATAGATTTTATAGGAGAGGACGGCTCGATGGTTATCTCGGACCCGTCAAACCCACAAAGGGATGGCAAAAAACTTTTCCAGTTCAATAGGGTGTTTGCGCCGAATGCTACACAAGGTGATGTGTTTAAGGATACTCAGCCATTGATAAGGTCTGTCATGGATGGTTACAATGTCTGCATATTCGCTTACGGTCAAACCGGCTCAGGAAAAACACATACAATGAGTGGTCCAAGTCACAAATTAGAGATTAGAAGTTGCGCAAAAGACAACGGCTTGACTCTCCCGGACGCGACAATTCATTGTGTTAAGTCTACAGCTGATGTTATTAACCTGATGAAGATCGGCGGGGGAAATCGTGTGATCAGCGCCACCGCCATGAACAACCGGAGCAGTCGCTCCCACAGGCAAGTATTTGAGAATAGTATGCATATAATGGAGACGAACAGTACTTTCTGCAAATTACTGAGTCGATTTGTTTTGAATGGCGTTAGTATTTTGACCGTGCATGTGCATGGAGAAGACTCGGCCGGAAACAATCTACGTAGCTGTTTGCATCTGATAGACCTCGCCGGAAGTGAGCGGGTGGACAGATCGGAAGTCACCGGAGATAGGCTGAAGGAGGCTCAGTATATCAACAGGTCTCTCTCTTGCCTAGGAGACGTGATCACGGCCTTGGCGCATAAGAATTCTCACGTTCCGTACAGGAATAGCAAGCTCACTCTCCTACTGCAGGATTCGTTGGGTGGGCAAGCCAAGACTTTGATGTTCGCCCATGTTAGTCCGGAAGAAGATTCCTTCAATGAAACAATCAGCACTTTGAAGTTCGCTCAACGAGTTTCGTCGGTCGAGCTCGGCGCTGCTCGGATGAACAAGGAGAGCTCAGAAATCAGACAACTTAAAGAACAGGAAAAAATTCGGGTTGCTCTCTATGTTCAGAAGGCAGCATTGCAGTTTATTGATGCGGGTGGTCGATCTGAATACGTTCTCTTGGATGAGACTAGAGAAGCAGGTTTTAATATTAATCCAGACGAACTTGCATCAATAGTCCGAAACCATGATTTTAAGGCCTTTAGATCACACGGCGGAACTGAAGGGATTGCTAGGAGAGTGTCTGTTTCGCTGAATACTGGTGTCAGTGAGAAGCATGTAGCTTTACGACAGAAGATTTATGGCATTAACCGCTACAAGGAAAAACCTTCAAAATCATTTTTAATGTTTTTGTTCGAAGCATCGCAAGACTTGACACTTATAATACTCATGGTCTGTGCCGTAGTTTCCTTAGGCGTTGGAATCGCCACTGAAGGATTGCCACGGGGAATGTATGATGGTATAGGGATCTTATTCAGTATATTTTTGGTGGTCTTAGTTACGTCTGTTAGCGACTACAAACAGTCCTTGCAATTCAAAGAGCTGGACCGGGAGAAGAAAAAAATATTTATCGATTTAAGTAGAGATGGATCAAGAAAAAGGGTCTCCATTTATGATGTAGTTGTTGGAGATATAGTTCATTTATCAATTGGAGATCAAGTTCCAGCTGATGGAGTTTTTGTATCAGGATACAGTTTGCTCATTGACGAATCAAGCTTGTCAGGAGAGACTGAACCAGTGAACATATATGAAGAGAAACCATTTCTTCTTGCAGGTACTAAAGTGCAAGATGGGTCTGCAAAAATGCTGGTGACAGCAGTCGGTATGAGAACTGAATGGGGAAAGTTGATGGAAACCCTGAATGAGGGAGGAGAAGATGAGACTCCATTGCAGGTGAAGTTAAATGGCGTTGCAACGCTTGTTGGAAAAATTGGTTTGACCTTTGCTGTGGTGACATTGTTGGTGTTGATAGTGAGGTTTCTGTTTGAAAAATACCTGCAACACACTCTAGGATATTGGTCTTCAAGTGATGCACTTCAGCTTCTTAACTTCTTTGCAATAGCTGTGACCATAGTTGTTGTTGCAGTTCCTGAAGGATTACCACTGGCAGTGACACTTAGTCTTGCGTTCGCTATGAAGAAATTAATGGATGAAAAAGCACTTGTGAGGCATCTCTCTGCATGTGAGACAATGGGTTCTGCTAGTTGTATTTGCACAGACAAGACAGGGACATTGACCACTAATCATATGGTTGTAGATAGAATATGGATTTGTGGAAAATCTATTGGGATTAAACGCAATGAGAGTAATGGAGTTCTGAGATCAGAGATATCTGACGGCATTATGAACATCCTTCGGCAGTCTATTTTCCAAAATACAAGTTCTGAAGTGTCAAAAGATAAAGATGGACAGAACTCTATTGTGGGAGGATCTCCAACGGAATCAGCATTGTTAGAATTTGGCTTGCTTCTAGGTGGCGATTTTGATGCCCTGCGAAGAGAATTTAAAATACTTAAGATTGAGCCTTTCAATTCTGTCAGGAAGAAGATGTCCGTTCTCGTCGCTCTTCCTGATGGCGGAACACGAGTTTTTTGCAAAGGGGCATCAGAAATAATTTTAAGAATGTGTGACAAGATTGTTGATGACAATGGAAATGCTGCTCAGTTAACTGAAGAACAGGTAAGAACTGTCTCAGACACTATCAATGGTTATGCTTCTGAAGCACTGAGAACCATAGGTTTGGCTTTTAAAGATACAGATTACTCTTCCAATGGAAATTCATTTCCAGATAGTGGCTTCACATTTGTGGCAGTTGTTGGAATCAAGGATCCTGTGCGTCGTGGAGTGAAGGATGCAGTCAAAACTTGTTTGGACGCTGGAATAACCGTTCGAATGGTCACAGGTGATAACTTACATACAGCTAAGGCCATAGCTAAAGAATGTGGCATCCTTACACCAGACGGTTTGGCCATCGAAGGACCGGATTTTCGTAACTTGTCTCCTGTGCAGATGAAGGAAATTATCCCCAAACTCCAGGTAATGGCTCGATCATTGCCATTGGATAAGTATACTTTGGTTTCCAATCTGAGAAAAACATTTGGCGAGGTTGTTGCAGTGACAGGAGACGGGACAAATGATGCCCCTGCCTTGCATGAGTCAGACATTGGATTGGCTATGGGCATTGCTGGTACCGAGGTTGTTGCCAAAGAAAATGCTGATGTTATCATAATGGACGATAATTTTGCGACTATTGTAAATGTTGCCAAATGGGGACGCTCAGTTTATATCAACATTCAAAAGTTTGTGCAGTTTCAGCTAACAGTAAACATTGTTGCTCTGGTGACCAATTTTGTTTCGGCGTGCATTTCAGGATCTGCTCCTCTAACTGCTGTGCAATTGCTTTGGGTCAACTTAATTATGGACACTCTTGGTGCATTGGCACTTGCCACGGAGCCTCCAAACGATGCTCTAATGAAAAGACGCCCTGTACTTAAGGGTATGAGTTTCATTACCAAAACCATGTGGAGGAACATTATTGGCCAAAGCATTTATCAGCTAGCTGTTCTTGGTGTTCTTAATTTTGCTGGAAAGAAACTTTTAGGACTTGGTGGCTCTGATGCCACTGATGTTCTGAACACTTTGATATTCAACGCATTCGTGTTTTGTCAGGTGTTTAATGAAATAAACAGCCGTGAAATTGAGAATATCAACATTTTCCGTGGCTTGTTCAACAACTGGATATTCATCGCTATTGTAGTCTCAACAGCTGCATTTCAAGTGATAATCGTCGAATTTTTAGGCGATTTTGCAAGCACAGTGCCGCTTAGCTGGAAATTTTGGGTACTAAGTATAGTGATTGGATTTGTTAGCATGCCTATTGCTGTAGTCTTGAAATGCATCCCAGTTGAAAGAACTTCAACCAAGCATCACGACGGTTACGATCCACTGCCTTCCGGCCCGGAATTGGCTTGA 4875 42.36 MEDASNKSLYDFHLTLASRKAEEAAWRRYEASRWLQSLVGPVVENPSTSQSISREFQPLPAYQYFENVRNFLVAMEELELPAFEASDLERETLDSGSTAKVVDCILALKSFYEWKKMNNGNGFYKHVKSPMAVHSASRIHSRPPLSYSSDPCRRLEMSAISEKQTAFKIENGNLEELIVKSLVDCLVDKKENIDGNLLASLRNRDMDGVSQLRKIMSRCLEEQLQEKLPEVSLISIVFNSFSGLPFYQDKSSHHLQLFQTQEKELMNLKSLYSRAKKEFVDMQSQLQRDLQYLGSQVQELSSAALGYHRVVQENRNLYNMVQDLKGNIRVYCRIRPSSNIESKNTIDFIGEDGSMVISDPSNPQRDGKKLFQFNRVFAPNATQGDVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSHKLEIRSCAKDNGLTLPDATIHCVKSTADVINLMKIGGGNRVISATAMNNRSSRSHRQVFENSMHIMETNSTFCKLLSRFVLNGVSILTVHVHGEDSAGNNLRSCLHLIDLAGSERVDRSEVTGDRLKEAQYINRSLSCLGDVITALAHKNSHVPYRNSKLTLLLQDSLGGQAKTLMFAHVSPEEDSFNETISTLKFAQRVSSVELGAARMNKESSEIRQLKEQEKIRVALYVQKAALQFIDAGGRSEYVLLDETREAGFNINPDELASIVRNHDFKAFRSHGGTEGIARRVSVSLNTGVSEKHVALRQKIYGINRYKEKPSKSFLMFLFEASQDLTLIILMVCAVVSLGVGIATEGLPRGMYDGIGILFSIFLVVLVTSVSDYKQSLQFKELDREKKKIFIDLSRDGSRKRVSIYDVVVGDIVHLSIGDQVPADGVFVSGYSLLIDESSLSGETEPVNIYEEKPFLLAGTKVQDGSAKMLVTAVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATLVGKIGLTFAVVTLLVLIVRFLFEKYLQHTLGYWSSSDALQLLNFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKLMDEKALVRHLSACETMGSASCICTDKTGTLTTNHMVVDRIWICGKSIGIKRNESNGVLRSEISDGIMNILRQSIFQNTSSEVSKDKDGQNSIVGGSPTESALLEFGLLLGGDFDALRREFKILKIEPFNSVRKKMSVLVALPDGGTRVFCKGASEIILRMCDKIVDDNGNAAQLTEEQVRTVSDTINGYASEALRTIGLAFKDTDYSSNGNSFPDSGFTFVAVVGIKDPVRRGVKDAVKTCLDAGITVRMVTGDNLHTAKAIAKECGILTPDGLAIEGPDFRNLSPVQMKEIIPKLQVMARSLPLDKYTLVSNLRKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVVAKENADVIIMDDNFATIVNVAKWGRSVYINIQKFVQFQLTVNIVALVTNFVSACISGSAPLTAVQLLWVNLIMDTLGALALATEPPNDALMKRRPVLKGMSFITKTMWRNIIGQSIYQLAVLGVLNFAGKKLLGLGGSDATDVLNTLIFNAFVFCQVFNEINSREIENINIFRGLFNNWIFIAIVVSTAAFQVIIVEFLGDFASTVPLSWKFWVLSIVIGFVSMPIAVVLKCIPVERTSTKHHDGYDPLPSGPELA 1624
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 54677413 54692543 - Bda018094.1 Bda03g01554 4813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01554 1624 Coils Coil 258 278 - -
Bda03g01554 1624 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 698 1604 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda03g01554 1624 SMART Cation_ATPase_N_a_2 702 776 IPR004014 -
Bda03g01554 1624 SUPERFAMILY Calponin-homology domain, CH-domain 19 122 IPR036872 -
Bda03g01554 1624 ProSiteProfiles Kinesin motor domain profile. 327 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 Pfam Cation transporter/ATPase, N-terminus 705 771 IPR004014 -
Bda03g01554 1624 SUPERFAMILY Calcium ATPase, transmembrane domain M 705 1604 IPR023298 -
Bda03g01554 1624 Gene3D - 1049 1245 IPR023299 GO:0000166
Bda03g01554 1624 Pfam E1-E2 ATPase 827 1017 - -
Bda03g01554 1624 ProSitePatterns E1-E2 ATPases phosphorylation site. 1041 1047 IPR018303 -
Bda03g01554 1624 Pfam Kinesin motor domain 425 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 Pfam Kinesin motor domain 333 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 SMART kinesin_4 325 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 SFLD p-type atpase 1021 1394 IPR044492 -
Bda03g01554 1624 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1046 1242 IPR023299 GO:0000166
Bda03g01554 1624 Gene3D - 721 922 - -
Bda03g01554 1624 Gene3D Kinesin motor domain 427 660 IPR036961 -
Bda03g01554 1624 PRINTS Kinesin heavy chain signature 577 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 PRINTS Kinesin heavy chain signature 528 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 PRINTS Kinesin heavy chain signature 400 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda03g01554 1624 Gene3D - 44 131 IPR036872 -
Bda03g01554 1624 SUPERFAMILY HAD-like 1038 1447 IPR036412 -
Bda03g01554 1624 SFLD C1.7: P-type atpase like 1021 1394 - -
Bda03g01554 1624 Pfam Cation transporting ATPase, C-terminus 1427 1600 IPR006068 -
Bda03g01554 1624 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1307 1430 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda03g01554 1624 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 791 1062 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda03g01554 1624 PANTHER CATION TRANSPORTING ATPASE 632 1610 - -
Bda03g01554 1624 Pfam Cation transport ATPase (P-type) 1093 1180 - -
Bda03g01554 1624 SUPERFAMILY Calcium ATPase, transduction domain A 827 920 IPR008250 -
Bda03g01554 1624 PANTHER CALCIUM-TRANSPORTING ATPASE 632 1610 - -
Bda03g01554 1624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 627 IPR027417 -
Bda03g01554 1624 CDD P-type_ATPase_Ca_PMCA-like 728 1475 - -
Bda03g01554 1624 Gene3D - 754 1601 - -
Bda03g01554 1624 Gene3D - 1036 1387 IPR023214 -
Bda03g01554 1624 Gene3D Kinesin motor domain 269 426 IPR036961 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00182 Bda-Chr3:1491857 Bda03g01554 Bda-Chr3:54677413 0 dispersed
Bda03g01554 Bda-Chr3:54677413 Bda11g01478 Bda-Chr11:21500638 0 dispersed
Bda12g00432 Bda-Chr12:5311088 Bda03g01554 Bda-Chr3:54677413 1.10E-152 dispersed
Bda07g00827 Bda-Chr7:9759122 Bda03g01554 Bda-Chr3:54677413 2.19E-18 transposed
Bda12g00373 Bda-Chr12:4278000 Bda03g01554 Bda-Chr3:54677413 0 transposed
Bda15g00987 Bda-Chr15:18283285 Bda03g01554 Bda-Chr3:54677413 4.34E-88 transposed
Bda03g01554 Bda-Chr3:54677413 Bda05g01038 Bda-Chr5:58817771 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01554 K01537 - jre:109010491 1488.78