Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01557 | ATGGCTTCTTCTTCCTCTGATCCTAGTTTGAAGCACGAGGTTGGAGGCAGTAGCGGAGGAGGAGACGAGAATTCGGAGGCTGTCGTAGCTAACGACCAGCTTTTGCTTTACAAAGGGCTGAAGAAAGCAAAGAAAGAGAGAGGATGTACTGCCAAAGAGAGAATCAGCAAAATGCCTCCCTGTGCTGCTGGAAAGCGCAGTTCCATTTATCGCGGAGTAACCAGGCATAGATGGACGGGTCGTTATGAAGCTCATCTTTGGGATAAGAGAGCATACGATGAAGAGGAAGCTGCAGCTAGGGCATATGATCTTGCTGCGTTAAAGTATTGGGGTCCTGGAACACTCATTAATTTTCCAGTAACTGACTACACAAGGGATCTTGAAGAGATGCAAAATGTATCAAGAGAGGAGTACCTTGCATCTTTAAGAAGAAAGAGCAGTGGTTTCTCTAAAGGAATATCTAAATATCGCGGACTCTCGAGTCGATGGGAGTCATCATTTGGTCGGGTGGCTGGATCTGAGTACTTCAACAGCATAAATTATGGTACAAGTGATGATCCAGCAGCAGAGGGAGAATTTATAAATAACTTCTGTATCGAAAGGAAGATCGACTTGACAAGTTACATTAGATGGTGGGGGCCTAACAAAACTCGTCAAGTGGATCACGGCTCAAGATCAAACGAAGAAACTAAACATAGTTGTGCTGGAGAGGTTGAAAGTGAGCTTAAAACTATGGAATGGCAAGTTCAACATACTGAGCCATATGAAATGCCACGTTTGGGAATATATCACGACAGAAAGAAACAGAAAGGCTTCAAAGTCTCTGCCTTAAGCATCTTGTCTCGTTCAGCTGCCTACAAGAGCTTGCAAGAGAAAGCGTTGAAATTGCAGGAAAATGGCAATGAGAATTATGAAAATGAGAACAAAAATGCTGTTAAAATGGACCATGGGAAGACAGTTGAGAAATCTGATAATCAGACTGGTAGTGAGAAATTTGGAGTTGCCCAAGGAATGAGCGGAGAATTGGCTATTCAAAGAAATATTTTCCCATTGACCCCTTTCTTAACAGCGCCACTTCTGACGAGCTATAGTAATGTTGATCCATTAGTTGATCCCATTCTTTGGTCGTCTATGGTTCCTGTTCTTCCTGCTGAACTTCATCGTCCAGCTGAGGTTTGTCTATTCTGTACAATTCTGTCGTAA | 1203 | 43.06 | MASSSSDPSLKHEVGGSSGGGDENSEAVVANDQLLLYKGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKRAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSKGISKYRGLSSRWESSFGRVAGSEYFNSINYGTSDDPAAEGEFINNFCIERKIDLTSYIRWWGPNKTRQVDHGSRSNEETKHSCAGEVESELKTMEWQVQHTEPYEMPRLGIYHDRKKQKGFKVSALSILSRSAAYKSLQEKALKLQENGNENYENENKNAVKMDHGKTVEKSDNQTGSEKFGVAQGMSGELAIQRNIFPLTPFLTAPLLTSYSNVDPLVDPILWSSMVPVLPAELHRPAEVCLFCTILS | 400 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 54748972 | 54752270 | - | Bda018097.1 | Bda03g01557 | 4816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01557 | 400 | PRINTS | Ethylene responsive element binding protein signature | 70 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g01557 | 400 | PRINTS | Ethylene responsive element binding protein signature | 101 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g01557 | 400 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Bda03g01557 | 400 | ProSiteProfiles | AP2/ERF domain profile. | 69 | 119 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g01557 | 400 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 2 | 380 | - | - | |
Bda03g01557 | 400 | Pfam | AP2 domain | 69 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g01557 | 400 | SMART | rav1_2 | 69 | 125 | IPR001471 | GO:0003700|GO:0006355 | |
Bda03g01557 | 400 | SUPERFAMILY | DNA-binding domain | 68 | 120 | IPR016177 | GO:0003677 | |
Bda03g01557 | 400 | Coils | Coil | 287 | 314 | - | - | |
Bda03g01557 | 400 | PANTHER | BNAA03G19580D PROTEIN | 2 | 380 | - | - | |
Bda03g01557 | 400 | Gene3D | AP2/ERF domain | 69 | 121 | IPR036955 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01557 | Bda-Chr3:54748972 | Bda01g02255 | Bda-Chr1:58302655 | 8.44E-07 | dispersed | |
Bda03g01557 | Bda-Chr3:54748972 | Bda13g01680 | Bda-Chr13:40175782 | 4.33E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15752 | PF00847 | AP2 | 1.00E-05 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01557 | K09285 | - | cit:102624476 | 560.836 |