Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01564 | TCCACAATGGGAACTCCGGAATTCCCAGATCTTGGAAAGCACTGTAGCGTTGAAGATTGCAAACTGATTGATTTCTTGCCCTTCACGTGTGATCGCTGCCGCCAGGTTTTTTGTTTAGAGCATAGGAGCTACATTAAGCATAATTGTCCCAAAGCCGACAAAAAAGACGTCACTGTCGTCATTTGTCCGCTCTGTGCAAATGGAGTTCGTCTAATTCCCGACGAAGATCCGAACATTACATGGGACAGACACGTCAACTCCGAATGCGATCCATCAAATTACGAGAAAGCGACGAAGAAGAAAAAGTGCCCGGTTACCGGCTGCAGGGAAACCTTAACATTCTCAAACACGATTAAGTGCAGGGATTGCTTGCTAGACCATTGTTTGAAGCACAGATTTGGACCCGACCATAAATGTCCTGGACCGAAGAAACCAGAAGCAAGTTTTCCATTTATTGGTCTTTTAAGTCGGAGTATAAAAGAAGATCCAAAGCCTAATCGGGCACCTAAGTCATCTTCTTCGCCTAAGTGGGCTACAAGCTTTCTCAATGCAGCCTCCACTGGCATAGGGAAAATAAGTGGGGAGATTAGCCAAGCCTGGCAGATTGCTCGAGATGGGGTCGGATCCAGCAGCTCGAATTTCGGCGGAAATAAACAGGAGGAATGCCCCCAATGCCACGCAAGATTTTCTTCTTTGACGACTTTGGTAGATCACGTTGAAAAAGTGCACGAAAAGAGTAGAAAGGTTGTCGATGTCTGTCCAAAATGTAGTCGGGGATTTCGGGATCCAGTTGCACTAGTAGAACACGTCGAAAGAGATCACGGCGGAACTTCAAAGGCTTAG | 843 | 46.38 | STMGTPEFPDLGKHCSVEDCKLIDFLPFTCDRCRQVFCLEHRSYIKHNCPKADKKDVTVVICPLCANGVRLIPDEDPNITWDRHVNSECDPSNYEKATKKKKCPVTGCRETLTFSNTIKCRDCLLDHCLKHRFGPDHKCPGPKKPEASFPFIGLLSRSIKEDPKPNRAPKSSSSPKWATSFLNAASTGIGKISGEISQAWQIARDGVGSSSSNFGGNKQEECPQCHARFSSLTTLVDHVEKVHEKSRKVVDVCPKCSRGFRDPVALVEHVERDHGGTSKA | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 54842151 | 54843641 | + | Bda018106.1 | Bda03g01564 | 4823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01564 | 280 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 220 | 248 | IPR013087 | - | |
Bda03g01564 | 280 | SUPERFAMILY | AN1-like Zinc finger | 7 | 52 | IPR035896 | - | |
Bda03g01564 | 280 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 251 | 279 | IPR013087 | - | |
Bda03g01564 | 280 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 253 | 274 | IPR013087 | - | |
Bda03g01564 | 280 | Gene3D | Classic Zinc Finger | 201 | 279 | - | - | |
Bda03g01564 | 280 | SMART | c2h2final6 | 220 | 243 | IPR013087 | - | |
Bda03g01564 | 280 | SMART | c2h2final6 | 251 | 274 | IPR013087 | - | |
Bda03g01564 | 280 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 3 | 280 | - | - | |
Bda03g01564 | 280 | ProSiteProfiles | Zinc finger AN1-type profile. | 9 | 57 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | SMART | AN1_Zf_4 | 103 | 144 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | SMART | AN1_Zf_4 | 15 | 54 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | Pfam | AN1-like Zinc finger | 103 | 143 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | Pfam | AN1-like Zinc finger | 15 | 54 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | ProSiteProfiles | Zinc finger AN1-type profile. | 97 | 147 | IPR000058 | GO:0008270 | |
Bda03g01564 | 280 | Pfam | C2H2-type zinc finger | 221 | 243 | - | - | |
Bda03g01564 | 280 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 3 | 280 | - | - | |
Bda03g01564 | 280 | Gene3D | - | 83 | 149 | IPR035896 | - | |
Bda03g01564 | 280 | Gene3D | - | 2 | 61 | IPR035896 | - | |
Bda03g01564 | 280 | SUPERFAMILY | AN1-like Zinc finger | 95 | 147 | IPR035896 | - | |
Bda03g01564 | 280 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 222 | 243 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01564 | Bda-Chr3:54842151 | Bda13g01663 | Bda-Chr13:40071435 | 3.11E-35 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15753 | PF01428 | zf-AN1 | 1.40E-07 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01564 | - | - | vvi:100255506 | 476.863 |