Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01575 ATGGCGTCGAAATTCTGGACACAGGGTGGCAGTGATTCTGAGGAAGAGGAAAGTGATTATGATGATGAGGAGATTGATAATGGGGATGTGGGTGAAGCTACAACAGATGCCCCTGGACACAGATATCTGCAGACAAATGCCAGTGACAGCGATGATCCTGATGAACAAAAACGTGTAATCAGGTCAGCAAAAGATAAGCGTTTTGATGAGATGTCTGCCACTGTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTATGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCGGGTCACTGAGTCGGAAAAGATCCCCTTCCTTTACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAACCAGGCCTTGACCAACAAGGAAGCTAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCTTGAATGCGATGAAACAGAAGCTAAAGAAGAACAACAAGCAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATTAGTGAGGAGGAAAAAGATGAAGAGGAGACAGATGAGGAGACAGAGACCGATACAGATTTTGATGAAGATCCTACTAAATTGGTAGAGTCAGGATCCGAAGATGAAGAGAATGACGAAGATGTTGATGAAGGCCCAGATGATCGTGATGGGGCTTGGGAGAAGAAGATGAGCAAGAAAGATAAGCTCATGGACAAGCAGTTTAAGAATCCAAGTGAGATTACGTGGGATACAGTGAACAAGAAGTTTAAGGAGGTAGTGGCCGCACGTGGTAGAAAAGGAACTGGAAGGTTTGAGCAGGTGGAGCAGCTAACATTCTTGACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAAATCCTTTTCAGTGTTGTTGCTGCTCAGTTTGATGTCAATCCAGGGCTTACAGGACACATGCCCATAAATGTTTGGAAGAAATGTGTGCAGAATATGCTTGTTATCCTTGATATTCTTGTGCACAATCCCAATATTGTGGTGGATGAAGTGGGCGGAATTGATGAGAATGAAAGCCAAAAAGGATCAAATTATAGTGGAAAAATACGAGTTTGGGGAAATTTAGTGGCTTTCTTAGAAAGAATAGATTCCGAGTTTTTCAAGAGTTTACAGTGCATTGATCCACACACTCGTGAGTATGTTGAGAGACTCAGAGATGAACCACTCCTTTCGGTACTTGCTCAAAATGTGCAGGAATATCTAGAAAGGATTGAAGATTTTAAGGCAGCTGCAAAAGTCTCATTGAGACGGGTTGAGCTTATTTATTACAAGCCTCAGGAAGTTTATGATGCCATGAAGAAGTTGGCTGAACAGACGGATAACGAAGATATTGGAGAAGCTGACGGTGAGCCTGTCATTGAAGAAACTAGAGGCCCTTCTCCATTTATTGTGACACCTGAGCTAGTACCTCGAAAACCCACTTTTCCAGAGAGCAGCCGGACTTTGATGGATATTCTGGTGAGTTTGATATACAAGTATGGAGATGAGAGGACCAAAGCACGAGCTATGCTTTGTGATATCTACCACCATGCCCTCTTGGATGAATTTTCTATTGCTCGGGATTTGCTACTTATGAGTCATTTACAGGACAGTATTCAGCTTATGGACATTTCAACTCAGATTCTTTATAACAGGGGTATGGCTCAACTTGGGCTCTGCGCTTTTAGGGTTGGGCTGATCAGTGAAGGACATGGGTGCCTTTCAGAATTATATTCAGGTGGAAGGGTAAAAGAGTTATTAGCGCAAGGCGTCTCTCAAAGTCGATATCATGAAAAGACTCCAGAACAGGAAAGGCTGGAACGACGAAGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTACATCTCATATGTGCCATGTTGCTGGAAGTCCCCAATTTGGCGTCTAA 1941 42.92 MASKFWTQGGSDSEEEESDYDDEEIDNGDVGEATTDAPGHRYLQTNASDSDDPDEQKRVIRSAKDKRFDEMSATVDQMKNAMKINDWVCLQENFDKINKQLEKVMRVTESEKIPFLYIKALVMLEDFLNQALTNKEAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKDEEETDEETETDTDFDEDPTKLVESGSEDEENDEDVDEGPDDRDGAWEKKMSKKDKLMDKQFKNPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVAAQFDVNPGLTGHMPINVWKKCVQNMLVILDILVHNPNIVVDEVGGIDENESQKGSNYSGKIRVWGNLVAFLERIDSEFFKSLQCIDPHTREYVERLRDEPLLSVLAQNVQEYLERIEDFKAAAKVSLRRVELIYYKPQEVYDAMKKLAEQTDNEDIGEADGEPVIEETRGPSPFIVTPELVPRKPTFPESSRTLMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSIQLMDISTQILYNRGMAQLGLCAFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVTSHMCHVAGSPQFGV 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 54951530 54954418 - Bda018119.2 Bda03g01575 4834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01575 646 MobiDBLite consensus disorder prediction 168 238 - -
Bda03g01575 646 MobiDBLite consensus disorder prediction 1 57 - -
Bda03g01575 646 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 47 631 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bda03g01575 646 MobiDBLite consensus disorder prediction 177 195 - -
Bda03g01575 646 Coils Coil 146 173 - -
Bda03g01575 646 MobiDBLite consensus disorder prediction 12 30 - -
Bda03g01575 646 MobiDBLite consensus disorder prediction 222 238 - -
Bda03g01575 646 Coils Coil 402 422 - -
Bda03g01575 646 MobiDBLite consensus disorder prediction 207 221 - -
Bda03g01575 646 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 632 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bda03g01575 646 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 1 632 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01575 Bda-Chr3:54951530 Bda06g00065 Bda-Chr6:656717 3.42E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01575 K03252 - qsu:112026168 970.689