Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01575 | ATGGCGTCGAAATTCTGGACACAGGGTGGCAGTGATTCTGAGGAAGAGGAAAGTGATTATGATGATGAGGAGATTGATAATGGGGATGTGGGTGAAGCTACAACAGATGCCCCTGGACACAGATATCTGCAGACAAATGCCAGTGACAGCGATGATCCTGATGAACAAAAACGTGTAATCAGGTCAGCAAAAGATAAGCGTTTTGATGAGATGTCTGCCACTGTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTATGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCGGGTCACTGAGTCGGAAAAGATCCCCTTCCTTTACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAACCAGGCCTTGACCAACAAGGAAGCTAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCTTGAATGCGATGAAACAGAAGCTAAAGAAGAACAACAAGCAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATTAGTGAGGAGGAAAAAGATGAAGAGGAGACAGATGAGGAGACAGAGACCGATACAGATTTTGATGAAGATCCTACTAAATTGGTAGAGTCAGGATCCGAAGATGAAGAGAATGACGAAGATGTTGATGAAGGCCCAGATGATCGTGATGGGGCTTGGGAGAAGAAGATGAGCAAGAAAGATAAGCTCATGGACAAGCAGTTTAAGAATCCAAGTGAGATTACGTGGGATACAGTGAACAAGAAGTTTAAGGAGGTAGTGGCCGCACGTGGTAGAAAAGGAACTGGAAGGTTTGAGCAGGTGGAGCAGCTAACATTCTTGACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAAATCCTTTTCAGTGTTGTTGCTGCTCAGTTTGATGTCAATCCAGGGCTTACAGGACACATGCCCATAAATGTTTGGAAGAAATGTGTGCAGAATATGCTTGTTATCCTTGATATTCTTGTGCACAATCCCAATATTGTGGTGGATGAAGTGGGCGGAATTGATGAGAATGAAAGCCAAAAAGGATCAAATTATAGTGGAAAAATACGAGTTTGGGGAAATTTAGTGGCTTTCTTAGAAAGAATAGATTCCGAGTTTTTCAAGAGTTTACAGTGCATTGATCCACACACTCGTGAGTATGTTGAGAGACTCAGAGATGAACCACTCCTTTCGGTACTTGCTCAAAATGTGCAGGAATATCTAGAAAGGATTGAAGATTTTAAGGCAGCTGCAAAAGTCTCATTGAGACGGGTTGAGCTTATTTATTACAAGCCTCAGGAAGTTTATGATGCCATGAAGAAGTTGGCTGAACAGACGGATAACGAAGATATTGGAGAAGCTGACGGTGAGCCTGTCATTGAAGAAACTAGAGGCCCTTCTCCATTTATTGTGACACCTGAGCTAGTACCTCGAAAACCCACTTTTCCAGAGAGCAGCCGGACTTTGATGGATATTCTGGTGAGTTTGATATACAAGTATGGAGATGAGAGGACCAAAGCACGAGCTATGCTTTGTGATATCTACCACCATGCCCTCTTGGATGAATTTTCTATTGCTCGGGATTTGCTACTTATGAGTCATTTACAGGACAGTATTCAGCTTATGGACATTTCAACTCAGATTCTTTATAACAGGGGTATGGCTCAACTTGGGCTCTGCGCTTTTAGGGTTGGGCTGATCAGTGAAGGACATGGGTGCCTTTCAGAATTATATTCAGGTGGAAGGGTAAAAGAGTTATTAGCGCAAGGCGTCTCTCAAAGTCGATATCATGAAAAGACTCCAGAACAGGAAAGGCTGGAACGACGAAGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTACATCTCATATGTGCCATGTTGCTGGAAGTCCCCAATTTGGCGTCTAA | 1941 | 42.92 | MASKFWTQGGSDSEEEESDYDDEEIDNGDVGEATTDAPGHRYLQTNASDSDDPDEQKRVIRSAKDKRFDEMSATVDQMKNAMKINDWVCLQENFDKINKQLEKVMRVTESEKIPFLYIKALVMLEDFLNQALTNKEAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKDEEETDEETETDTDFDEDPTKLVESGSEDEENDEDVDEGPDDRDGAWEKKMSKKDKLMDKQFKNPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVAAQFDVNPGLTGHMPINVWKKCVQNMLVILDILVHNPNIVVDEVGGIDENESQKGSNYSGKIRVWGNLVAFLERIDSEFFKSLQCIDPHTREYVERLRDEPLLSVLAQNVQEYLERIEDFKAAAKVSLRRVELIYYKPQEVYDAMKKLAEQTDNEDIGEADGEPVIEETRGPSPFIVTPELVPRKPTFPESSRTLMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSIQLMDISTQILYNRGMAQLGLCAFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVTSHMCHVAGSPQFGV | 646 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 54951530 | 54954418 | - | Bda018119.2 | Bda03g01575 | 4834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 168 | 238 | - | - | |
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Bda03g01575 | 646 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 47 | 631 | IPR008905 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 177 | 195 | - | - | |
Bda03g01575 | 646 | Coils | Coil | 146 | 173 | - | - | |
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 12 | 30 | - | - | |
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 222 | 238 | - | - | |
Bda03g01575 | 646 | Coils | Coil | 402 | 422 | - | - | |
Bda03g01575 | 646 | MobiDBLite | consensus disorder prediction | 207 | 221 | - | - | |
Bda03g01575 | 646 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 632 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Bda03g01575 | 646 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C | 1 | 632 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01575 | Bda-Chr3:54951530 | Bda06g00065 | Bda-Chr6:656717 | 3.42E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01575 | K03252 | - | qsu:112026168 | 970.689 |