Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01589 ATGCTTTCTTCTTCTTCTTCTTCTTCAACTTACTCTCGCCCTTTCATGGCGGCAACAGCCATTTCACTAACCCTTTTTCTGCATCTTTCAGAAGCTCAATTGCAGACCACATTTTACGCCTCCACGTGCCCAAACGCGTCCAACATCGTTCTCACTTCGATCCAGGCGGCCTTACAATCCGACCCACGAATCGGCGCCAGCCTGATTCGATTGCATTTTCACGACTGCTTTGTCAATGGATGCGACGGGTCGTTATTGTTGGACAACAGCGGGAACATAAAGAGCGAAAAAGATGCTGGTCCTAATACAAACTCTACTCGTGGGTTCGATGTGGTCGATAACATAAAAACCGCTTTGGAAAACTCATGTCCGGTCGTTGTTTCTTGCGCAGATATTCTCGCCCTCGCCGCTCAAGCTTCGATTTCTTTGGCAGGGGGGCCATCATATAATGTATTATTAGGGAGAAGAGACAGTTTAACAGCAAATCAAGCTGGTGCAAATACCTCTATACCCTCTCCGTTCGAAGGAATTACAAATATTACCTCCAAATTCGCTGCCGTCGGGCTTGACACAACCGATCTCGTCGCATTATCAGGCGCTCATACATTCGGACGAGTTCAATGCCGGCTACTCTCGAACCGTCTCTACAATTTCAATAACACAGGCAATCCAGATCCAACGCTAAACGCATCGTTATTAGCTAATTTGCAACAAATTTGTCCGCAGAACGGCAGCGGATTTGCTTTGGCGAACCTTGATCCGACTACTCCGAATGGTTTTGACGAAAACTATTACACAAACCTTCAGAACAATGAGGGTGTTCTGCAATCGGACCAGGAGCTTTTTTCGAGCGGAGGAGCGGGGATGGCCGCCATAGTCAACAACTTCAGCAGTAACCAGAGTGCTTTCTTTGAGAAATTCGTCCAGGCGATGGTTAAGATGGGAAGTATTAGCCCGTTGAGCGGAGGAAGTGGGGAGATAAGATCAAATTGTAGGAAAGTTAATGGGAGTTGA 1014 47.04 MLSSSSSSSTYSRPFMAATAISLTLFLHLSEAQLQTTFYASTCPNASNIVLTSIQAALQSDPRIGASLIRLHFHDCFVNGCDGSLLLDNSGNIKSEKDAGPNTNSTRGFDVVDNIKTALENSCPVVVSCADILALAAQASISLAGGPSYNVLLGRRDSLTANQAGANTSIPSPFEGITNITSKFAAVGLDTTDLVALSGAHTFGRVQCRLLSNRLYNFNNTGNPDPTLNASLLANLQQICPQNGSGFALANLDPTTPNGFDENYYTNLQNNEGVLQSDQELFSSGGAGMAAIVNNFSSNQSAFFEKFVQAMVKMGSISPLSGGSGEIRSNCRKVNGS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 55169256 55170776 + Bda018135.1 Bda03g01589 4848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01589 337 PANTHER PEROXIDASE 72-RELATED 27 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PANTHER PEROXIDASE 54 27 336 - -
Bda03g01589 337 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 Pfam Peroxidase 53 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Bda03g01589 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Bda03g01589 337 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 SUPERFAMILY Heme-dependent peroxidases 33 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 CDD secretory_peroxidase 33 334 IPR033905 GO:0004601|GO:0042744
Bda03g01589 337 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda03g01589 337 Gene3D Peroxidase, domain 2 171 314 - -
Bda03g01589 337 Gene3D - 38 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01589 Bda-Chr3:55169256 Bda09g01371 Bda-Chr9:45592090 4.54E-118 dispersed
Bda08g00797 Bda-Chr8:10956625 Bda03g01589 Bda-Chr3:55169256 2.86E-76 dispersed
Bda13g01421 Bda-Chr13:36908920 Bda03g01589 Bda-Chr3:55169256 8.95E-83 dispersed
Bda03g01589 Bda-Chr3:55169256 Bda08g00894 Bda-Chr8:16287689 6.72E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01589 K00430 - pvy:116114507 489.189