Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01600 CTTGGAGGGAATAAGTTTCATGTATGGGACACCCCACCTTGGAATTTTCCTTTGGATTCTGTACCTAGGAATCAAAACATTAGTGGCCCTCCTACGTCTGAGTCAAGTGCAATTGAGAATAGTCCCTCTATTAGAAAGATTGAGCATAAGAAAAGAAGGCTGGGACCTGGTGGTATAGCTTTCATGGTTGGTGGAGCAACTTTAATGGCAACTTGTGTAGCTCTATACGTTGTTCTCCAAGTAAATCGATCCCGAGCAAATAAGCGTACAAGCTTGGCAACTTATGATGCTTCTTCACATTCTCTTCCTATCAACACAACTGAAGTAGAGGAGATTTCTTTTACTCTGCCACAGAGCAGGCAGATGATGGCTGTCCGTTCTCCACCCCTTCTTGCTCCAATGCGCAAATCTCCAATATGCCACACGGGGACTGAAATGCCTTTAAAAAGAAAAAGTATTTCTGAGAGAGGCAGATTGTCATTCAGAACAAAAATTTTTACTGTGGCAGAGCTTCAATTTGCTACAAACAGCTTCAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCCGTTTACAAAGCAAAATTTCCTGATGGTCAAGTCTTGGCTGTGAAGAATGTCAGCCTGGTGGCACTCTCTGTCACTGAAGAAGATCAGTTCTTGGATGTGGTTTGGACGGCATCATGTTTGAGGCATCCTAACATAGTACCACTAATCGGTTACTGCACAGATCATGGACAGCATCTTCTTGTGTACGAATACATCCCCAATTTGACTCTTTATGATGCCTTGCATTGTGATGCCTGCAAACCTCTATCATGGAGTATGAGAATCCAGATTTCCCTCGGCATTGCAAGGGCTTTGGATTATTTGCACTCCACATTTTCACAACCTACTGCTCATTACAATCTGAAGGCTGCCAATATCTTACTAGACAAAGATCTAACGCCTCATATTTCTGACTGCGGGCTAGCTGTTTTGAGGCCACTTACTAGTACCAGAGTTAAAATTAAGGCAAGTACCTTGGAGAAACTCTATTGTTCTGCATCTGAAATTGCTATTGGTGATAGCGGCTACATTGCACCTGAACACGGCCAACCAGGAAGTGATGTTACAAAGAGTGACGTGTATGCCTTTGGAGTTTTGCTGTTAGAGCTGGTAACAGGAAGGAAACCCTTTGACGATTCAAGACATATAAAAGAGAAATCTTTAGTAAAGTGGGCTTCGTATAGACTTCATGACAATGAGAGTTTAGAGCAGATGGTTGATCCAAGAATTAAAGGAACATTTTCCTCTAAGACTCTCTCCCACTATACTGATATAGTCTCCCTCTGTATACAGCAGCCAGTGCAGGCATTCCGGCCACCAATGACAGAAATAGTGGAATCACTTGCCAGAATTGTCCGGCAGGTAAAGCAGGCAAAAAGTGGTGCACCAGAACCAGAAGGTACTGAAATTGTTCCTCCCGATATGTCATTTCGTTCGACCAATACCCGCTTCATAGGCTCCCCCTCTTTGAGCATATTATCCAGCTGA 1539 43.34 LGGNKFHVWDTPPWNFPLDSVPRNQNISGPPTSESSAIENSPSIRKIEHKKRRLGPGGIAFMVGGATLMATCVALYVVLQVNRSRANKRTSLATYDASSHSLPINTTEVEEISFTLPQSRQMMAVRSPPLLAPMRKSPICHTGTEMPLKRKSISERGRLSFRTKIFTVAELQFATNSFSEENLLGEGSLGSVYKAKFPDGQVLAVKNVSLVALSVTEEDQFLDVVWTASCLRHPNIVPLIGYCTDHGQHLLVYEYIPNLTLYDALHCDACKPLSWSMRIQISLGIARALDYLHSTFSQPTAHYNLKAANILLDKDLTPHISDCGLAVLRPLTSTRVKIKASTLEKLYCSASEIAIGDSGYIAPEHGQPGSDVTKSDVYAFGVLLLELVTGRKPFDDSRHIKEKSLVKWASYRLHDNESLEQMVDPRIKGTFSSKTLSHYTDIVSLCIQQPVQAFRPPMTEIVESLARIVRQVKQAKSGAPEPEGTEIVPPDMSFRSTNTRFIGSPSLSILSS 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 55312020 55314987 + Bda018151.1 Bda03g01600 4859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01600 512 MobiDBLite consensus disorder prediction 19 42 - -
Bda03g01600 512 SUPERFAMILY Protein kinase-like (PK-like) 156 465 IPR011009 -
Bda03g01600 512 Gene3D Transferase(Phosphotransferase) domain 1 256 483 - -
Bda03g01600 512 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 9 476 - -
Bda03g01600 512 Gene3D Phosphorylase Kinase; domain 1 141 255 - -
Bda03g01600 512 ProSiteProfiles Protein kinase domain profile. 178 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01600 512 Pfam Protein kinase domain 179 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01600 512 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 476 - -
Bda03g01600 512 MobiDBLite consensus disorder prediction 19 43 - -
Bda03g01600 512 MobiDBLite consensus disorder prediction 475 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01600 Bda-Chr3:55312020 Bda13g00653 Bda-Chr13:7491609 2.50E-82 dispersed
Bda03g01600 Bda-Chr3:55312020 Bda09g01596 Bda-Chr9:47377168 2.19E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69573 PF00069 Pkinase 3.10E-32 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01600 - - qsu:112030392 622.468