Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda03g01600 | CTTGGAGGGAATAAGTTTCATGTATGGGACACCCCACCTTGGAATTTTCCTTTGGATTCTGTACCTAGGAATCAAAACATTAGTGGCCCTCCTACGTCTGAGTCAAGTGCAATTGAGAATAGTCCCTCTATTAGAAAGATTGAGCATAAGAAAAGAAGGCTGGGACCTGGTGGTATAGCTTTCATGGTTGGTGGAGCAACTTTAATGGCAACTTGTGTAGCTCTATACGTTGTTCTCCAAGTAAATCGATCCCGAGCAAATAAGCGTACAAGCTTGGCAACTTATGATGCTTCTTCACATTCTCTTCCTATCAACACAACTGAAGTAGAGGAGATTTCTTTTACTCTGCCACAGAGCAGGCAGATGATGGCTGTCCGTTCTCCACCCCTTCTTGCTCCAATGCGCAAATCTCCAATATGCCACACGGGGACTGAAATGCCTTTAAAAAGAAAAAGTATTTCTGAGAGAGGCAGATTGTCATTCAGAACAAAAATTTTTACTGTGGCAGAGCTTCAATTTGCTACAAACAGCTTCAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCCGTTTACAAAGCAAAATTTCCTGATGGTCAAGTCTTGGCTGTGAAGAATGTCAGCCTGGTGGCACTCTCTGTCACTGAAGAAGATCAGTTCTTGGATGTGGTTTGGACGGCATCATGTTTGAGGCATCCTAACATAGTACCACTAATCGGTTACTGCACAGATCATGGACAGCATCTTCTTGTGTACGAATACATCCCCAATTTGACTCTTTATGATGCCTTGCATTGTGATGCCTGCAAACCTCTATCATGGAGTATGAGAATCCAGATTTCCCTCGGCATTGCAAGGGCTTTGGATTATTTGCACTCCACATTTTCACAACCTACTGCTCATTACAATCTGAAGGCTGCCAATATCTTACTAGACAAAGATCTAACGCCTCATATTTCTGACTGCGGGCTAGCTGTTTTGAGGCCACTTACTAGTACCAGAGTTAAAATTAAGGCAAGTACCTTGGAGAAACTCTATTGTTCTGCATCTGAAATTGCTATTGGTGATAGCGGCTACATTGCACCTGAACACGGCCAACCAGGAAGTGATGTTACAAAGAGTGACGTGTATGCCTTTGGAGTTTTGCTGTTAGAGCTGGTAACAGGAAGGAAACCCTTTGACGATTCAAGACATATAAAAGAGAAATCTTTAGTAAAGTGGGCTTCGTATAGACTTCATGACAATGAGAGTTTAGAGCAGATGGTTGATCCAAGAATTAAAGGAACATTTTCCTCTAAGACTCTCTCCCACTATACTGATATAGTCTCCCTCTGTATACAGCAGCCAGTGCAGGCATTCCGGCCACCAATGACAGAAATAGTGGAATCACTTGCCAGAATTGTCCGGCAGGTAAAGCAGGCAAAAAGTGGTGCACCAGAACCAGAAGGTACTGAAATTGTTCCTCCCGATATGTCATTTCGTTCGACCAATACCCGCTTCATAGGCTCCCCCTCTTTGAGCATATTATCCAGCTGA | 1539 | 43.34 | LGGNKFHVWDTPPWNFPLDSVPRNQNISGPPTSESSAIENSPSIRKIEHKKRRLGPGGIAFMVGGATLMATCVALYVVLQVNRSRANKRTSLATYDASSHSLPINTTEVEEISFTLPQSRQMMAVRSPPLLAPMRKSPICHTGTEMPLKRKSISERGRLSFRTKIFTVAELQFATNSFSEENLLGEGSLGSVYKAKFPDGQVLAVKNVSLVALSVTEEDQFLDVVWTASCLRHPNIVPLIGYCTDHGQHLLVYEYIPNLTLYDALHCDACKPLSWSMRIQISLGIARALDYLHSTFSQPTAHYNLKAANILLDKDLTPHISDCGLAVLRPLTSTRVKIKASTLEKLYCSASEIAIGDSGYIAPEHGQPGSDVTKSDVYAFGVLLLELVTGRKPFDDSRHIKEKSLVKWASYRLHDNESLEQMVDPRIKGTFSSKTLSHYTDIVSLCIQQPVQAFRPPMTEIVESLARIVRQVKQAKSGAPEPEGTEIVPPDMSFRSTNTRFIGSPSLSILSS | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 55312020 | 55314987 | + | Bda018151.1 | Bda03g01600 | 4859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda03g01600 | 512 | MobiDBLite | consensus disorder prediction | 19 | 42 | - | - | |
Bda03g01600 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 156 | 465 | IPR011009 | - | |
Bda03g01600 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 256 | 483 | - | - | |
Bda03g01600 | 512 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 | 9 | 476 | - | - | |
Bda03g01600 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 141 | 255 | - | - | |
Bda03g01600 | 512 | ProSiteProfiles | Protein kinase domain profile. | 178 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01600 | 512 | Pfam | Protein kinase domain | 179 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda03g01600 | 512 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 9 | 476 | - | - | |
Bda03g01600 | 512 | MobiDBLite | consensus disorder prediction | 19 | 43 | - | - | |
Bda03g01600 | 512 | MobiDBLite | consensus disorder prediction | 475 | 495 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01600 | Bda-Chr3:55312020 | Bda13g00653 | Bda-Chr13:7491609 | 2.50E-82 | dispersed | |
Bda03g01600 | Bda-Chr3:55312020 | Bda09g01596 | Bda-Chr9:47377168 | 2.19E-106 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69573 | PF00069 | Pkinase | 3.10E-32 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda03g01600 | - | - | qsu:112030392 | 622.468 |