Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01650 ATGGAAAACCATACTTCTTCTCGGCAATTCAACTCTCAGCTCTATACCCGCCTGAACCAACCATGGCCGGTTAATAATTTCAACCTCAATAGAAGAAGCAATGTCTTGGAAGAAGAATTCGACGACCCAACTGCCGCAGACTGCGGAGAAGACGGCGCGGCCACCGTCTGTCAACGAGAGTGGGAGGAAACGGGGGATAGAGAATCGATGTTCGAAAAGGCACTAACGCCGAGTGATGTCGGAAAACTGAACCGGCTTGTTATTCCGAAACAACACGCCGAGAAATACTTTCCCCTCGGCGGCGCGGGAGACTCCGTCGACAAGGGTTTGCTTCTGAGCTTCGAGGACGAGGCCGGAAAATCGTGGAGGTTCCGTTATTCGTACTGGAACAGTAGCCAAAGCTACGTTCTCACTAAAGGGTGGAGCCGGTATGTTAAAGAGAAGAGGCTGGAATCCGGCGACGTGGTTTTCTTTCAGCGACACCAGACGGACGGCGACCGGCTGTTTATCGGGTGGAGGCGGCGACCGGCGCACGATAGCAGCAGTGCAGTGATGGCGCAGGAATGTGATGGTAACAGTAATGGAGGAACTGGGGGTTGGACCAGTTTGTTCCATTCTGCGCATCCTTATCCTCAATTTTTTTCCATTTTTCCTGATTCAATTTCTCCGACAGGGTCGGCCTCCTCCCAGAGCCCCGCAACATCAGCCGGAAACTCGAGGATCCTAAGACTCTTCGGTGTGAACATGGAGTGCCAAACGGACGTCTCCGGCGACCCATCTGCAAGTCCTCGTTTTCTTTCCGATTTGACCCCACCCAATTCTCAATTCTTCCCCCAGCTTTTTTCTTCAAATCCTCCTAATCATATGGTATGA 873 52.0 MENHTSSRQFNSQLYTRLNQPWPVNNFNLNRRSNVLEEEFDDPTAADCGEDGAATVCQREWEETGDRESMFEKALTPSDVGKLNRLVIPKQHAEKYFPLGGAGDSVDKGLLLSFEDEAGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLESGDVVFFQRHQTDGDRLFIGWRRRPAHDSSSAVMAQECDGNSNGGTGGWTSLFHSAHPYPQFFSIFPDSISPTGSASSQSPATSAGNSRILRLFGVNMECQTDVSGDPSASPRFLSDLTPPNSQFFPQLFSSNPPNHMV 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 55852070 55853251 + Bda018206.1 Bda03g01650 4909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01650 290 SMART B3_2 71 176 IPR003340 GO:0003677
Bda03g01650 290 SUPERFAMILY DNA-binding pseudobarrel domain 67 176 IPR015300 -
Bda03g01650 290 CDD B3_DNA 70 165 IPR003340 GO:0003677
Bda03g01650 290 Pfam B3 DNA binding domain 71 175 IPR003340 GO:0003677
Bda03g01650 290 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 36 254 IPR044800 GO:0003700
Bda03g01650 290 Gene3D - 65 183 IPR015300 -
Bda03g01650 290 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 36 254 - -
Bda03g01650 290 ProSiteProfiles B3 DNA-binding domain profile. 71 176 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01650 Bda05g01144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01027 Bda-Chr3:9739224 Bda03g01650 Bda-Chr3:55852070 1.59E-51 dispersed
Bda03g01650 Bda-Chr3:55852070 Bda07g00161 Bda-Chr7:1999022 5.27E-49 dispersed
Bda03g01443 Bda-Chr3:51914796 Bda03g01650 Bda-Chr3:55852070 1.04E-15 transposed
Bda03g01650 Bda-Chr3:55852070 Bda05g01144 Bda-Chr5:59629321 2.83E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15761 PF02362 B3 2.20E-30 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01650 - - zju:107415017 276.944