Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01654 ATGAAGAACGGTGATTCAACCACCATCGACGTTCAAGAGAGGAGCGGCAGCGACAAGAAAAAGGCGGTTTTAGTGGCGGCGCAGCCCAAACAGGGTGGTTTGAAGAGAGGGTTCGCCATTCTTGACTTGATTTTGAGGATCGGAGCTATGGTGGCTGCTCTGGCCTCCGCCGCAGCCATGGGAACCAGCAATCAAACTCTTCCTTTTTTCACTCAGTTCTTTCAGTTCCAAGCTAACTACAATGATTTGCCTACTTTTCAGTTTTTTGTGATCGCCATGGGAATAGTTGCAGGCTACTTAGTTCTATCCATCCCCTTCTCCATCGTCTGCATCATTCGACCTCACGCAGTCGGACCCAGATTTCTGCTACTCATTTTAGATACTGTGGCGCTGACTCTAGCCACATCGGCAGGCGCCGCAGCAGCCGCCATCGTCTACTTAGCTCACAACGGAAACTCCAACGCGAACTGGCTGGCCATCTGCAGCCAGTTCGGCAACTTTTGCCAGCAAGTTAGTGGGGCGGTTGTGGGTGCTTTCATTACAGCGGTTATCTTCATCTTCCTCGTCTTTTTCTCCGGTTTGGCTCTCCGGAAGAAGTGA 600 51.17 MKNGDSTTIDVQERSGSDKKKAVLVAAQPKQGGLKRGFAILDLILRIGAMVAALASAAAMGTSNQTLPFFTQFFQFQANYNDLPTFQFFVIAMGIVAGYLVLSIPFSIVCIIRPHAVGPRFLLLILDTVALTLATSAGAAAAAIVYLAHNGNSNANWLAICSQFGNFCQQVSGAVVGAFITAVIFIFLVFFSGLALRKK 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 55870139 55871031 - Bda018210.1 Bda03g01654 4913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01654 199 PANTHER CASP-LIKE PROTEIN 14 198 - -
Bda03g01654 199 Pfam Casparian strip membrane protein domain 36 183 IPR006702 -
Bda03g01654 199 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 14 198 - -
Bda03g01654 199 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 43 193 IPR006459 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00355 Bda03g01654 CCT
Bda03g00715 Bda03g01654 CCT
Bda03g01654 Bda03g00715 ECH
Bda01g00355 Bda03g01654 ECH
Bda03g00715 Bda03g01654 ECH
Bda03g01654 Bda05g01146 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01654 Bda-Chr3:55870139 Bda07g01348 Bda-Chr7:16296162 1.70E-56 dispersed
Bda01g00355 Bda-Chr1:29328096 Bda03g01654 Bda-Chr3:55870139 2.20E-44 wgd
Bda03g01654 Bda-Chr3:55870139 Bda05g01146 Bda-Chr5:59642321 1.18E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01654 - - jre:109002137 263.462