Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01683 AAAATGGAAGATCAGTACTCTATGGCCGATCTTAGGCAGCTTATGAATGGAGGGAGGTTCCATTTCCCTCCGGCTAATTCTCAGCACATTGAGATTTTTCCCGGCTACAGGAATCTCCCGCCACCGTCGGGACAACTTCACCACCACCACCTCCATCAGTACGACCTGATGATGACTCCGGGAAGTCAAGCTTCTGATATGATGACGGAGTTTAGGTCTGATTCTTCGATGGGTTGTGCTCAAGTGGGTGGCGCAGTAACTGCGACCACCGCTTCGGCGGCTACTTTTAGCAGTGGATTCGAAGTGGAAGCTCCGAGCTATGGGGGTGATGGAGGGTCTGGAAGATGGCCGAGGCAAGAGACGCTTACCCTTTTGGAGATCAGATCTCGTCTGGATTCTAAGTTCAAAGAGGCTAATCAAAAGGGCCCTCTCTGGGATGAAATCTCCAGGATAATGTCTGAAGAATATGGGTATCAAAGAAGTGGGAAAAAATGCAGGGAAAAGTTCGATAATTTGTACAAATATTACAAGAAGACAAAGGAAGGCAAAGCTGGCAGACAAGATGGGAAACACTACAGGTTCTTTCGTCAACTTGAAGCTCTATATGGGGAAACCAGCAATGGAGTTTCAGTTTCAGAAGCAAATTTAGTTGGAGATAATGGTTTAAGATTCCATGACCGAACAGCTCAGGCTAATCAGGAATCCAGCTACCAGTTTCAGAAACACAGCGAGAGCCTCAGTCTGTCTAATTCTACGGAGTTCAATTCCTCTTCCTCGGACGGAGCTTATGACGTCGGAGTTGCAGGAATAATGGAGAACGAGGGTTGGGAAAAGAGGAGGAAGAAGAGAGGAGGGAAATGCTGGAAGGCGAAGGTAAAAAAGTTTATCGATTCACAGATGAGAAAGCTCATAGAGAAGCAAGAAGAATGGTTAGATAAGTTAATGAAGAGCGTTGAGCAGAAGGAGAGAGAGAGGATGATGAAAGAGGAAGAATGGAGGAAAAATGAAGTGTCGAGGATTGAGAGAGAACATAGATTTTGGGCAAGGGAGAGAGCTTGGATCGAAGCTCGAGATTCGGCTTTCATGGAGGTCTTCCGAAAGTTAACTGGAGGAGAAGCGATTAGATCGTCTTCGATTGGCGAAAACCAAAATGAAGCCTTAACCGAGATTATGAACAACAATGGAGAGAAATGGGAAAGTATCAAAGAGTATGTGAAGAAGGAGAGCAACAACAAGAAACGAAAGGAGAATTCGATAAACTTTGATTATTTACAAAGCGAATCGTTCGGATATGATCAAGGAGGAACAACCTACGGAGATATCAAAGAGGAAGCGATCGAAAAGTCGACAAGAGCCGAAACCATCCAAGGGTCTTCACCAAATCATAATGCAAATGCTAATGTTGTCCAAGATAATTGCTTTCGGTTCCTTTTTGGGGAGGGAGAGTCCTTGTTGGAAAATTATGGTATGAAATCTAGCAATGACGATCAAAACCGATCGACTTCTTAA 1509 44.6 KMEDQYSMADLRQLMNGGRFHFPPANSQHIEIFPGYRNLPPPSGQLHHHHLHQYDLMMTPGSQASDMMTEFRSDSSMGCAQVGGAVTATTASAATFSSGFEVEAPSYGGDGGSGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEISRIMSEEYGYQRSGKKCREKFDNLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGETSNGVSVSEANLVGDNGLRFHDRTAQANQESSYQFQKHSESLSLSNSTEFNSSSSDGAYDVGVAGIMENEGWEKRRKKRGGKCWKAKVKKFIDSQMRKLIEKQEEWLDKLMKSVEQKERERMMKEEEWRKNEVSRIEREHRFWARERAWIEARDSAFMEVFRKLTGGEAIRSSSIGENQNEALTEIMNNNGEKWESIKEYVKKESNNKKRKENSINFDYLQSESFGYDQGGTTYGDIKEEAIEKSTRAETIQGSSPNHNANANVVQDNCFRFLFGEGESLLENYGMKSSNDDQNRSTS 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 56217197 56219447 + Bda018241.1 Bda03g01683 4942
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01683 502 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 395 483 - -
Bda03g01683 502 Coils Coil 304 331 - -
Bda03g01683 502 PANTHER - 33 388 - -
Bda03g01683 502 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 33 388 - -
Bda03g01683 502 Gene3D - 116 178 - -
Bda03g01683 502 Pfam Myb/SANT-like DNA-binding domain 115 201 IPR044822 -
Bda03g01683 502 ProSiteProfiles Myb-like domain profile. 114 173 IPR001005 -
Bda03g01683 502 PANTHER - 395 483 - -
Bda03g01683 502 CDD GT1 115 180 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda03g00704 Bda03g01683 CCT
Bda01g00388 Bda03g01683 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01683 Bda-Chr3:56217197 Bda11g00876 Bda-Chr11:8614273 1.03E-20 dispersed
Bda01g01315 Bda-Chr1:48569911 Bda03g01683 Bda-Chr3:56217197 8.65E-163 transposed
Bda05g00927 Bda-Chr5:57859223 Bda03g01683 Bda-Chr3:56217197 1.80E-08 transposed
Bda08g00593 Bda-Chr8:6053329 Bda03g01683 Bda-Chr3:56217197 2.81E-149 transposed
Bda01g00388 Bda-Chr1:29848444 Bda03g01683 Bda-Chr3:56217197 3.33E-131 wgd
Bda03g00704 Bda-Chr3:5968744 Bda03g01683 Bda-Chr3:56217197 4.98E-125 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15764 PF13837 Myb_DNA-bind_4 1.10E-19 CL0123 Bda TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01683 - - tcc:18598163 463.381