Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01713 ATGCCTGCGTTATTCAACCCAGATTCCCATATCTACTCCTCCCCTCGTCCTCCCATCGTCTTCCCCACCAATCCTAACCTCTCCATTACCACATTTCTCTTTCAAAAAACCTCCTCTTTCCCTCACAGAATCGCTCTCATCGATACTGAAAATGGCGAAAGCTTGACCTTCCACCAGCTGAAAGTCCATGTTTCCAAGCTCTCCCAGGCTCTACTTCGGCTCGGAATCGAAAAGGGCAGTGTCGTCCTCATTTTCGCTCCTAACTCAGTTTACTTCGCTGTGTCTTTCTTCGCCGTTGTCGCCATAGGAGCTATAGCAACGACCTGCAATCCTTCTTATACTGTACCGCAGCTTTTGAAGCAAGTTAAGGACTGTAACCCTAAGCTTATAATCACTGTTCCCGAACTTTGGGAGAAGGTCTGTTCATTGAATTTAACGTCAATATTTCTGAAGTCTCCGATTTCCTCTGATTTTCCGATACACCGGATTCCCAGTGTCTGGTTTTACTCCGATTTAGTCGCGAAATTAAGTGAATCATCGGAGACTCCAGATAATAACGTCATTCAGAATGATATAGCCGCGTTTCTGTACTCGTCCGGGACGACGGGGACTAGCAAGGGGGCGATTCTTACGCACAGAAACTTCATCGCAACGTCGTTAATCGTGACGGGGGATCAGGACAGTCAAGGCGACGGGATGAACGTCATTCTATGCTTCTTGCCGATGTTTCATGTGTACGGACTGGCGATTCTACTTTGCGCGCAGCTTGCGAGAGGGAACCGAGTGGTGACAATGGCGAAGTTTGAGCTCGAGATGGCGATGAAGACGGTGGAGAAATACCGGATTACCCATCTCTACGCCGTTCCGCCGGTGATGATTGCTCTGGCGAAGGGAAGGACGGTGAAGAAGTACGATTCGTCGTCTTTGACGCAGATTTCATCAGGGGCTGCTCCTCTAGCGAATGATGTGATTGAAGCGGTTGCAAAGAATTTCCCCAACGCTAAAATTCTTCAGGGATATGGAATGACTGAAACTTGTGGAGTTACTTCAAAGACCGCAAGATCAAGTCTCACATGTTCAACCGGAACGCTCTCGTCCGGAATTGAAGCCAAAATCATCGATGTTGATACTTCTAAGCCTCTTCCTCCTCTGCATTTAGGAGAAATATATGTCCGAGGACCAAGTATCATGCAAGGATATTTAAATAATGTAGAGGCCACAAAGCTGACTATTGATGATCAAGGGTGGCTGCATACCGGAGATCTTGGATATTTCAACGATGCGGGAGAGCTGTTCGTTGTGGATCGAATCAAAGAACTCATTAAATGCTATGGTTTTCAGGTTGCACCAGCAGAGCTTGAAGGGATATTGCTTTCTCACCCCGAGATTATCGATGCTGTCGTGGTCCCACGTCCAGATGCAAAAGCCGGCGAGGTGCCAATTGCATTTGTCATTAAATCGACTAATAGCTCAATCACAACCGAAGATGTTCAAAAATTTGTCGCGAATCAGGTCGCACCGTTCAAAAAATTACGAAGTGTAACTTTTGTAAATAGCATACCGAAATCGGCTTCTGGGAAGATTTTGAGAAGGGAGGTAATTCAAATGGTCCGAGCAAGAATGTAG 1626 46.56 MPALFNPDSHIYSSPRPPIVFPTNPNLSITTFLFQKTSSFPHRIALIDTENGESLTFHQLKVHVSKLSQALLRLGIEKGSVVLIFAPNSVYFAVSFFAVVAIGAIATTCNPSYTVPQLLKQVKDCNPKLIITVPELWEKVCSLNLTSIFLKSPISSDFPIHRIPSVWFYSDLVAKLSESSETPDNNVIQNDIAAFLYSSGTTGTSKGAILTHRNFIATSLIVTGDQDSQGDGMNVILCFLPMFHVYGLAILLCAQLARGNRVVTMAKFELEMAMKTVEKYRITHLYAVPPVMIALAKGRTVKKYDSSSLTQISSGAAPLANDVIEAVAKNFPNAKILQGYGMTETCGVTSKTARSSLTCSTGTLSSGIEAKIIDVDTSKPLPPLHLGEIYVRGPSIMQGYLNNVEATKLTIDDQGWLHTGDLGYFNDAGELFVVDRIKELIKCYGFQVAPAELEGILLSHPEIIDAVVVPRPDAKAGEVPIAFVIKSTNSSITTEDVQKFVANQVAPFKKLRSVTFVNSIPKSASGKILRREVIQMVRARM 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56597464 56600473 - Bda018274.2 Bda03g01713 4972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01713 541 Pfam AMP-binding enzyme 36 443 IPR000873 -
Bda03g01713 541 Gene3D - 439 540 IPR045851 -
Bda03g01713 541 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Bda03g01713 541 SUPERFAMILY Acetyl-CoA synthetase-like 13 539 - -
Bda03g01713 541 Gene3D - 10 438 IPR042099 -
Bda03g01713 541 CDD 4CL 21 532 - -
Bda03g01713 541 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Bda03g01713 541 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 538 - -
Bda03g01713 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 538 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00476 Bda-Chr2:45654363 Bda03g01713 Bda-Chr3:56597464 1.84E-34 dispersed
Bda03g01713 Bda-Chr3:56597464 Bda08g01177 Bda-Chr8:47204989 6.49E-137 dispersed
Bda09g00213 Bda-Chr9:3006493 Bda03g01713 Bda-Chr3:56597464 4.99E-25 dispersed
Bda12g00551 Bda-Chr12:9109960 Bda03g01713 Bda-Chr3:56597464 1.49E-113 dispersed
Bda03g01713 Bda-Chr3:56597464 Bda07g00643 Bda-Chr7:7773464 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01713 K01904 - qsu:112025709 687.567