Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01723 ATGAAGAGCCCATTCTGGTTTTGGGATTGCTTTTCTTCTTCCTCTGATCTAAACACGGATGATGGCCCGAAGGATGAAAATTTCCGACTGTTTACTCGCAATGAACTTAAATCTGCTACGCATAACTTTCGATCATCGAATAAGGTTGGGCAAGGTGGATTCGGCGCTGTTTATAAGGGCCGGCTTCAAAATGGAACGATTGTAGCTGTGAAAACTCTCTCCATCGAAATGGAATCCATGCGCGGAGAAAGAGAATTCATTGCAGAGTTATCTGCACTCTCGAATGTCAGACATGAGAATCTTGTGAGACTTCGAGGGTGCTGTGTTGATGGAGCGAATAGATATTTGGTTTATGATTACATGGAGAACAACAGCCTTACGCACACTCTTTTAGGGGTAGATGCAAATAGGCAAAAATTCGATTGGGAAACCCGAAGGGAAATTTCTATCGGAGTTGCTCGAGCCATTGCTTATCTACACGAGGAGGTCGATCCCCACATAGTTCACCGAGATATCAAAGCCAGCAACATACTTCTCGATCAAAATTTTCGACCGAAAGTTGCAGATTTCGGTTTGTCGAAGCTTCTGAGAGAGAACAGCTCTTACATCAGTACTAAAGTGGCAGGCACATTAGGTTATCTTGCTCCGGAATATGCAATTAGCGGACACTTGACAAGAAAATCAGACGTTTACAGCTATGGAGTTCTTCTGTTAGAGATTGTGAGCGGTAGAGGTGTTGTTGATTTTGACATAGAACATGGAGAACATTATCTCGTCCAGAAGGCTTGGGAAGCATTTAAGGCCAATAACCTTCTGCAATTGGTAGATCCGATTCTGGGGCCAAATTTTTCGACTAAAGAAGCGTTGCGATTCTTAAAAACGGGTTTACTTTGCGTTCAGGAAACCACAAGACAGCGCCCGACGATGTCTACTGTTGTGAAAATTTTATCAAACGAGGAGAACGAGATTGAGGACGATAAGATTTCGGAGCCAGGAATGGTTGCTGATTACATGGATATAAAGATGGGAGTGGGAGACAAGCGATCATCTCACAGCATTTTCTCAAAGGGTTCTAACAGTAATAGCATATGA 1092 43.13 MKSPFWFWDCFSSSSDLNTDDGPKDENFRLFTRNELKSATHNFRSSNKVGQGGFGAVYKGRLQNGTIVAVKTLSIEMESMRGEREFIAELSALSNVRHENLVRLRGCCVDGANRYLVYDYMENNSLTHTLLGVDANRQKFDWETRREISIGVARAIAYLHEEVDPHIVHRDIKASNILLDQNFRPKVADFGLSKLLRENSSYISTKVAGTLGYLAPEYAISGHLTRKSDVYSYGVLLLEIVSGRGVVDFDIEHGEHYLVQKAWEAFKANNLLQLVDPILGPNFSTKEALRFLKTGLLCVQETTRQRPTMSTVVKILSNEENEIEDDKISEPGMVADYMDIKMGVGDKRSSHSIFSKGSNSNSI 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56707656 56709289 - Bda018285.1 Bda03g01723 4982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01723 363 Gene3D Transferase(Phosphotransferase) domain 1 121 333 - -
Bda03g01723 363 Gene3D Phosphorylase Kinase; domain 1 13 120 - -
Bda03g01723 363 ProSiteProfiles Protein kinase domain profile. 43 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01723 363 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 339 - -
Bda03g01723 363 PANTHER RECEPTOR-LIKE KINASE 18 339 - -
Bda03g01723 363 Pfam Protein kinase domain 44 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01723 363 SMART serkin_6 43 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01723 363 CDD STKc_IRAK 49 316 - -
Bda03g01723 363 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Bda03g01723 363 SUPERFAMILY Protein kinase-like (PK-like) 27 316 IPR011009 -
Bda03g01723 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bda03g01723 363 PIRSF ILK 19 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01723 Bda-Chr3:56707656 Bda12g00820 Bda-Chr12:37630529 1.15E-124 dispersed
Bda03g01723 Bda-Chr3:56707656 Bda12g00813 Bda-Chr12:37532606 7.94E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69575 PF00069 Pkinase 2.00E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01723 - - pvy:116143105 498.434