Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01724 ATGGAAGGTGGGTTGACTTGGGTAGAGCTTCAAGGCAAATTGCATTATACATACGCGTCCTGTCCTCTGACTCTTTTTTCACTCCCCCCATTGCTTTTTCTTTCGCTTTTCCTTTCTCAGATTTTGTCAAGAAGCAGCTCCGTACGATCACCACCACCGAGGGTCGGCGGGAGATATCCTGGTGGGCCAGTTATGCCTGCGCAGACTCCATATGTCGAGTACCAGAAAACAGTTACCTTACGAAATGATGTCAGCCTGAAGAAGGAAACTTTGAAAATCGTACCGGACGGCCATAATCCGGGGAAGTTTCTTGTCACATTTATGTTTGATGCGGCGGTCGCCGGAAGCATCACTGTTATGTTCCTTGCGAAAGAAGGAAAAGACTGTAATCTAACACCAATGAAGGAAGACATTTTCAAACCCGTGACAGTAGGTTTTGAGAAGGGTCTGAGGCAAAAGTTCCGGCAGCCTGCCGGAACGGGGATCGATCTGTCAGCACTGGAGGAAGAGTTATTCAAATCGAGTGAGATGGACGTCTATCCTCTGGCCATAAAAGCAGAGGCTCTTCCGGACAATCAAACCGGAGCTAAGATCTCCGAAATTACTCAGGCAGTGATCGAGTACCATGTGAGAGTTTTGAAGCAGATCCTGTGGGTGAACAATGAGAGGTATGAGCTGCAGGATATATATCGAACTGGAAATTCAATGGAAGGTGATTTGGATGGTAACGATTGGAGAAAAGAATGTGCCATTTGCTTGTCAGAACCGTGCGATACAATCGTCCTTCCGTGCCGTCATATGGTAATGACTATGATAAATTGTTGTTATCATGATATTGATTGTATGGATAAAAAAGAAGTTTTTGTTTTTGATCGTGTTGATCTCTTTTATCTTTTATCGTTTGACTGCTGTACTGATATCTTCATTTTTACTCTTTTTTTTTCGTTCTTGTCACAGTGCATGTGCAATGGCTGTGCGAAGGTTTTGATGTTCCAGACAGATCGATGCCCTATTTGCCGACAACCCGCTGACAAGCTTAGCAGGTCCGACGATTGA 1056 44.7 MEGGLTWVELQGKLHYTYASCPLTLFSLPPLLFLSLFLSQILSRSSSVRSPPPRVGGRYPGGPVMPAQTPYVEYQKTVTLRNDVSLKKETLKIVPDGHNPGKFLVTFMFDAAVAGSITVMFLAKEGKDCNLTPMKEDIFKPVTVGFEKGLRQKFRQPAGTGIDLSALEEELFKSSEMDVYPLAIKAEALPDNQTGAKISEITQAVIEYHVRVLKQILWVNNERYELQDIYRTGNSMEGDLDGNDWRKECAICLSEPCDTIVLPCRHMVMTMINCCYHDIDCMDKKEVFVFDRVDLFYLLSFDCCTDIFIFTLFFSFLSQCMCNGCAKVLMFQTDRCPICRQPADKLSRSDD 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56711076 56713000 + Bda018286.1 Bda03g01724 4983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01724 351 PANTHER MAHOGUNIN 319 346 IPR045194 GO:0061630
Bda03g01724 351 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 54 270 - -
Bda03g01724 351 PANTHER MAHOGUNIN 54 270 IPR045194 GO:0061630
Bda03g01724 351 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 319 346 - -
Bda03g01724 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 348 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01724 Bda-Chr3:56711076 Bda05g01235 Bda-Chr5:60224938 7.34E-125 dispersed
Bda03g01724 Bda-Chr3:56711076 Bda05g01232 Bda-Chr5:60205097 7.34E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01724 - - csv:101216150 317.39