Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01734 ATGCCTCCCCATTTAGAACGTCCAGCTGTAGATAATGCTGGATGCATAGTTACAAGTGCGTCAGGGGGCTCCTTTGTTTCAAGGCTGAAACGAGATACAACAAAAGACGGTGATTTTGTTCCATTACCTGGCCAACTTCTACGCAAATATATAACTTATGCAAGAAGCTTTGTCTTTCCTAGGATGTCAAAGCCGGCAGCAGATATCCTGCAGAAGTTTTATTTACGATTGAGAGATCAGAATACATCCGCAGATAGTACACCAATTACAGCTCGACAACTGGAAAGTTTGGTGAGGCTGGCAGAAGCTCGAGCCAGGATCGACTTGAGAGAAGAGATAACAGCCCAAGATGCCATGGATGTGGTTGAAATTATGAAAGAATCCCTCTACGACAAGTATGTAGATGAGCATGGCGTTGTAGATTTTGGTCGAAGTGGGGGAATGAGTCAACAGAAAGAAGCTAAACGATTTTTGAGTGCCCTCAATAAGCAGTCAGAATTACAACAAAAAGATTGTTTTACAATTTCTGAAATTTACAGTTTGGCAGATAGAATTTGTCTAAGAGTTCCTGATATTGACACATTTGTTGATAATCTCAACAGTGTTGGTTATCTCCTTAAGAAAGGGCCAAAGACATACCAGGTATGA 648 41.2 MPPHLERPAVDNAGCIVTSASGGSFVSRLKRDTTKDGDFVPLPGQLLRKYITYARSFVFPRMSKPAADILQKFYLRLRDQNTSADSTPITARQLESLVRLAEARARIDLREEITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFTISEIYSLADRICLRVPDIDTFVDNLNSVGYLLKKGPKTYQV 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56776528 56778174 + Bda018298.1 Bda03g01734 4993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01734 215 Pfam MCM AAA-lid domain 46 129 IPR041562 -
Bda03g01734 215 PANTHER DNA HELICASE MCM8 33 215 - -
Bda03g01734 215 Gene3D - 18 135 IPR027417 -
Bda03g01734 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 135 IPR027417 -
Bda03g01734 215 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 33 215 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01734 Bda-Chr3:56776528 Bda09g00338 Bda-Chr9:4340736 4.92E-15 dispersed
Bda03g01734 Bda-Chr3:56776528 Bda14g00572 Bda-Chr14:4347542 8.87E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01734 K10737 - zju:107432749 351.673