Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01735 ATGAAATTGGTCTACAATGGAGTCCTGATAATCAACTTCGTTATGGACAGACAACAAATATATCGGTTGCAAACGAGGCACGAAAGCAATACAAGACAGTCAGACTTTTTTCCGGCTGATTCAAGGAAGTATTGTTATACGCTTAATGTAACGAGTAGGACCAGGTACCTTGTTAGAACATCATTCTTGTATGGAAACTTTGATGAAAACAATGTTTATCCAAAATTCGACATTTCCCTCGGACCAACTTATTGGTCCACGATTGTCATATCTGATGCTGATACTATAGAGGTCAGAGAGTTAATATTTTTAGCAACAAATCCTACTATGAGTGTGTGCTTATCGAATGCGACTACCGGACAACCATTTATATCCACTCTTGAGCTCCGACCATTTAATGGCTCGATGTATTACACGGAATTTGAAAATCAATTTTACCTAGGTGTTTCTGCAAGGATAAACTTTGGTGCAGATTCTGAAGCTCCAGTGAGGTATCCAGATGACCCGTTTGATCGTATTTGGGAGGCAGACTCTGTGAAGAAAGCAAATTTCTTGGTCGATGTTGCTGCAGGTACTGAAAAAGTGTCGACCAATCAGTCAATTAATGTAGACAGAGATACCAGACCGCCTGAAAAAGTAATGCAAACGGCCGTTGTTGGTAGAAACGGGTCGTTGACTTATCGGTTGAATTTGGATGGTTTTCCTGGTTTTGGATGGGCAGTCACCTACTTTGCAGAAATCGAAGATTTGACTCCAACGGAATCAAGGAAGTTCAGACTAGTACTTCCTGGCTCACCTGATGTAAGCAAAGCTGTGGTGAACATAGAAGAAAATGCGCAGGGGAAATATCGCCTCTATGAACCGGGATTTACAAACCTATCCCTTCCTTTTGTTTTGTCTTTTAAATTTGGCAAAACATCAGACTCTAACTTGGGGCCTCTCTTAAATGCTATGGAGATCAATAAATATCTCGAGAAGAACGAAGGGTCTATAGATGAGCCGGTTATTAGTGATGTTGTTTCGCGCTATTCATCGGTAGGCTGGGATGAAGAAGGTGGCGATCCTTGTTTGCCTGTTCCATGGTCATGGCTGTTGTGTAATACAAATCAGCAACCACAAATAGTTAAAATTTCGTTGTCGGAGAGGAATTTGACGGGAACCATCCCTTCGGTGTTGGCAAATCTGGAGGGTTTAGAAGAATTATGGCTTGATGGGAATGCGTTGACGGGCCCAATACCGGATTTGACTGGATGTGTGAACTTGAAGATCTTGCATCTCGAGAATAACAAATTGACTGGAGGGCTGCCTTCGTCTTTATCGAATCTACCAAATTTAAGGGAGCTGTATGTGCAAAATAACATGTTATCTGGAAAAGTTCCATCAGTTCTTCTCAGTAAAAACTTGATCTTGGACTTCTCCGGAAATAACAATCTTAGTACAGAGGGTGGGAAAAAAGTGCATGCAAATATAATCATAGCTTCAGCAGTTGGTGTTGCTGTCCTGCTCGTAGCTACTATAATTGCATGTTTATGCTTGCGGAAGGGCCAGAGAAGTAAGAAACATAGGGAACAAGCTTCTTTTAGAGAATCACTACCTGCTCGGAGTCTTGTTTCTTTTAAAAGCGATGCACCAAACGATGTAGCCCACCGTTTCAGTGTCGATGAAATTGAAGATGCCACTAGAAATTTCGAGAGGAAAATCGGGTCTGGAGGTTATGGTGTCGTTTACTACGGCAAGCTAGACGATGGAAAAGAAATTGCAGTTAAAGTTCTGACCAGTAATTCTTTCCAAGGAAAACGGGAATTTACAAACGAGGTAACTCTTTTGTCGAGGATTCATCACCGAAACCTGGTACAATTTCTCGGATATTGTCAAGAAGAATGGAGGAGCATGCTTATTTACGAGTTCATGCATAATGGAACCCTCAAGGAGCATCTTTACGGCCCATTAACGCATGAAAACGGTATGAATTGGATCAAACGGCTCGAGATAGCCGAAGACGCCGCAAAAGGGATCGAGTATCTTCACACGGGTTGTATACCGGCTATTATTCATAGGGACTTAAAAAGCAGCAATATTCTTTTGGACAAGCACATGAGAGCCAAAGTTTCTGATTTTGGCCTTTCGAAGCTTGCTGTAGATGGTGCCTCCCATGTCTCTAGCATTGTTCGAGGAACCGTCGGTTATTTGGATCCCGAATATTACATATCACAACAATTAACGGACAAGAGCGATGTTTATAGTTTTGGGGTCATTCTTCTTGAGTTGATCTCTGGTCAAGAGGCCATATCTAACGAGAGCTTTGGTGTCAACTGTCGCAACATAGTACAGTGGGCGAAGTTGCACATTGAGAGCGGAGACATCCAAGGGATAATCGACCCGTCACTGCAGAACAAATATGATATTCAGTCGATGTGGAAAATAGCGGAGAAAGCATTGATGTGCGTGCAGCCTCATGGGAATATGAGGCCATCCATATCCGAAGTGCTAAAAGAGATTCAAGATGCACTTATGATAGAGAGGGAAACCAGAGCAAGTCGAGAAGGAAACTCCAACTCAGACGACTTGTCGAGACGCTCGATCCAGTCTTCTATGAATACGGGACTGCAAGATTTTGTGGCGATGGAGAATTACGTGTCGTTTGATGAATCCATTGCCCAACCCACTGCCAGGTAG 2676 42.64 MKLVYNGVLIINFVMDRQQIYRLQTRHESNTRQSDFFPADSRKYCYTLNVTSRTRYLVRTSFLYGNFDENNVYPKFDISLGPTYWSTIVISDADTIEVRELIFLATNPTMSVCLSNATTGQPFISTLELRPFNGSMYYTEFENQFYLGVSARINFGADSEAPVRYPDDPFDRIWEADSVKKANFLVDVAAGTEKVSTNQSINVDRDTRPPEKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLTPTESRKFRLVLPGSPDVSKAVVNIEENAQGKYRLYEPGFTNLSLPFVLSFKFGKTSDSNLGPLLNAMEINKYLEKNEGSIDEPVISDVVSRYSSVGWDEEGGDPCLPVPWSWLLCNTNQQPQIVKISLSERNLTGTIPSVLANLEGLEELWLDGNALTGPIPDLTGCVNLKILHLENNKLTGGLPSSLSNLPNLRELYVQNNMLSGKVPSVLLSKNLILDFSGNNNLSTEGGKKVHANIIIASAVGVAVLLVATIIACLCLRKGQRSKKHREQASFRESLPARSLVSFKSDAPNDVAHRFSVDEIEDATRNFERKIGSGGYGVVYYGKLDDGKEIAVKVLTSNSFQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEWRSMLIYEFMHNGTLKEHLYGPLTHENGMNWIKRLEIAEDAAKGIEYLHTGCIPAIIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPSLQNKYDIQSMWKIAEKALMCVQPHGNMRPSISEVLKEIQDALMIERETRASREGNSNSDDLSRRSIQSSMNTGLQDFVAMENYVSFDESIAQPTAR 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56779740 56784232 - Bda018299.1 Bda03g01735 4994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01735 891 Gene3D Phosphorylase Kinase; domain 1 538 636 - -
Bda03g01735 891 Gene3D - 148 322 - -
Bda03g01735 891 SUPERFAMILY L domain-like 354 477 - -
Bda03g01735 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Bda03g01735 891 Pfam Protein tyrosine and serine/threonine kinase 563 778 IPR001245 GO:0004672|GO:0006468
Bda03g01735 891 Gene3D Transferase(Phosphotransferase) domain 1 637 859 - -
Bda03g01735 891 SMART serkin_6 561 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01735 891 SUPERFAMILY Protein kinase-like (PK-like) 546 831 IPR011009 -
Bda03g01735 891 PANTHER TYROSINE KINASE DOMAIN PROTEIN 35 891 - -
Bda03g01735 891 ProSiteProfiles Protein kinase domain profile. 561 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda03g01735 891 PANTHER OS07G0107800 PROTEIN-RELATED 35 891 - -
Bda03g01735 891 ProSitePatterns Protein kinases ATP-binding region signature. 567 589 IPR017441 GO:0005524
Bda03g01735 891 Pfam Malectin-like domain 27 321 IPR024788 -
Bda03g01735 891 Gene3D Ribonuclease Inhibitor 333 487 IPR032675 -
Bda03g01735 891 CDD STKc_IRAK 567 834 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01735 Bda-Chr3:56779740 Bda12g01091 Bda-Chr12:42635243 1.54E-138 dispersed
Bda08g00884 Bda-Chr8:15954932 Bda03g01735 Bda-Chr3:56779740 1.92E-65 dispersed
Bda12g01092 Bda-Chr12:42670307 Bda03g01735 Bda-Chr3:56779740 7.26E-77 dispersed
Bda10g00956 Bda-Chr10:43874893 Bda03g01735 Bda-Chr3:56779740 0 transposed
Bda14g00519 Bda-Chr14:3753467 Bda03g01735 Bda-Chr3:56779740 7.79E-39 transposed
Bda14g01313 Bda-Chr14:14613964 Bda03g01735 Bda-Chr3:56779740 1.40E-137 transposed
Bda02g00799 Bda-Chr2:48675990 Bda03g01735 Bda-Chr3:56779740 3.48E-78 wgd
Bda03g01735 Bda-Chr3:56779740 Bda05g01245 Bda-Chr5:60314525 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69577 PF12819 Malectin_like 1.60E-68 CL0202 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01735 - - csv:101212456 1343.56