Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda03g01749 ATGGCAGACCAGCCTCTTTCTTCCGCGTTACTTACAGACCCAAAGGTGGCCATGGAAACAGAGAGCCCAACCGGACCCGAATTGAAGCGCCAACATCACTGCCTTGTAGAAGAGACAGACCCTCACTCCTTTTCCACTAAGAGACAGACCAAAGAAGCTTCTACTGATGACATTCGCTCAGAGGTCTCTAACCCTGTTATTTCTCCCAAGGAAAATCACTCCAGTTTACTAGATATCTCTAGCCAACCTCCTGAGTTGGTTAATGACCAAGTAGAGTGTGCAGACCTTGTTTCTGCTTGTTCTGCAAATTCTAGCGCGGAGGAGGCATCCAGCGATAAAGAGGTTGGTCGCAGTGACATGTGCCAAAATGATATTAATACATCTTGTCCAGCCCACATATCACAGTTTGTATTAGAAATTCCTAAGCATATCAGTTCAACTGGAGTTAGAAAAATTACGTTTAAGTTCAGCAAAAGAAAGGAGGACTATGACAATCACTTGTCTTTTTTGGCGCCTCGGACTGCTCTATATGGACATAATAATGGTAATTGGTCTGGCAGTTCTGAGGATGACCATATTGTTGGAACTTCTTTATCAGATGAAACATATCTAGAGGCACCACCACACACATTGTTGCACTCATGTGGACCTAATATGGAGATGAAAATGTCTAAGAAGGTCTTCCCGAGCAATTACCCGACAAATGTCAAAAAGCTGCTATCCACTGGTATTCTTGATGGAGCTAGAGTGAAGTATATTTCTACCACATGCAAGGTAAAGAAGTTAGATGGAATTATAAATGGCGGTGGATATATGTGTGGATGCTCATCGTGCAACTTCTCATCTGTTCTCAGTGCTTATGAGTTTGAGAATCATGCTGGTGTCAAGACTAGACATCCTAATAATCATATATATCTTGAGAATGGGAGGCCAATTTACAGTGTAATTCAAGAAATAAAAAATGCTCCTGTCAGGTTGTTGGATGAAGTGATAAAGGATGTCGCTGGCTCGTCCGTCAACATGGATTCACTTGAAGCTTGGAAAGTGGTTTCAATTTTGAAAAGTGTATTTGTTTTATTTGCCATTTTGTATGGTTCACATAGTGCAACGACATACATTACATGCAGATCAATCCCTTGTTTGTCTAAAACGATGGTGAAACAAAAGAAAATTGCTGAAGGAAGCACAAAAAGAAGGGATAATGATCTGCACAGGTTGCTTTTCATGCCAAATGGACTTCCAGACGGAGCTGAATTGGCATATTTTATTAAAGGGCAGAGAATTCTGGGCGGGTACAAGCAAGGAAATGGTATAGTTTGTAGCCATTGTGACAAAGAGGTTAGTCCTTCACAGTTTGAAGCTCATGCTGGAATGGCTGCTAGACGTCAACCTTATCGTCATATTTATACTTCAAATGGGATTACACTGCATGATATAGCTATTTCATTGGCCAACGGGCAAAAGCTTACCACAGGAGACAGTGATGATATGTGTGCCGCATGTGGGGATGGAGGAGATCTTATATTTTGTGCTGGATGCCCTCGGGCTTTTCATACTGCTTGTTTGCAGTTACAGTCAGCTCCTAATGGAGATTGGTGTTGCCCGAATTGTAGAGATAAAGTGGGTAACAGTAGGAAAACGTCTTCTGGAGATTCATCAAGCCTTGCAAAACCAATTGTTATACGTTTAACGCGAGTTGTCAAATCACCAGATTTTGAGATTGGTGGATGTGTTGTTTGCAGGTGGGGGCATGATTTTAGTGTTGCCAAGTTTGATGAACAGACTGTTATGCTTTGCGATCAATGTGAGAGAGAGTTTCATGTTGGCTGCCTGCGCAGTAGTGGATTATGTGATTTAGAGGAACTTCCAAAAGATAAGTGGTTCTGCTGTGACGACTGCAATAGGATCCATGTGGCTTTACAGAATATAGTTTTGAATGGTGCAGAGAACATTCCAGCTTCATTGTTCAACTTAATAGTCAGAAAGCATATGGAGAAAGGGATATTTATTGATAGAACAGTTAACGATGTCCAATGGAGAATTTTAAGTGGAAAAAGTCGCTATCCAGTAGATCTTCCATTACTTTCAAGGGTTGTGGCTATGTTTCGAGAGTGTTTTGATCCGATTGTTGCAAATTCCGGTCGTGATCTTATACCAGTTATGGTGTATGGGAGAAATATATCTGGTCAAGAGTTTGGGGGAATGTACTGCGTCGTCCTAATTGTGAGGTCCGTTGTCGTATCTGCTGGTCTTCTTAGGATTTTCGGCCGCCAGGTTGCTGAGCTTCCTATAGTGGCGACGAGCAGAGAACATCAACGCAAAGGATATTTCCAAGTATTGTTCTCATGCATAGAAAGACTACTTTGTTCCCTAAAAGTAGAAAATGTGGTGCTCCCAGCAGCTGAGGACGCGGAGTCAATTTGGACGAAAAAATTGGGTTTTAGACGGATGAGCGAGGATCAATTGAAGAAGTATTTGAGGGAGGTGCAGTTGACGATATTTAAAGGCACATCCATGCTGGAGAAGGTGGTGGAGCGGACGCCAGAATGA 2550 42.2 MADQPLSSALLTDPKVAMETESPTGPELKRQHHCLVEETDPHSFSTKRQTKEASTDDIRSEVSNPVISPKENHSSLLDISSQPPELVNDQVECADLVSACSANSSAEEASSDKEVGRSDMCQNDINTSCPAHISQFVLEIPKHISSTGVRKITFKFSKRKEDYDNHLSFLAPRTALYGHNNGNWSGSSEDDHIVGTSLSDETYLEAPPHTLLHSCGPNMEMKMSKKVFPSNYPTNVKKLLSTGILDGARVKYISTTCKVKKLDGIINGGGYMCGCSSCNFSSVLSAYEFENHAGVKTRHPNNHIYLENGRPIYSVIQEIKNAPVRLLDEVIKDVAGSSVNMDSLEAWKVVSILKSVFVLFAILYGSHSATTYITCRSIPCLSKTMVKQKKIAEGSTKRRDNDLHRLLFMPNGLPDGAELAYFIKGQRILGGYKQGNGIVCSHCDKEVSPSQFEAHAGMAARRQPYRHIYTSNGITLHDIAISLANGQKLTTGDSDDMCAACGDGGDLIFCAGCPRAFHTACLQLQSAPNGDWCCPNCRDKVGNSRKTSSGDSSSLAKPIVIRLTRVVKSPDFEIGGCVVCRWGHDFSVAKFDEQTVMLCDQCEREFHVGCLRSSGLCDLEELPKDKWFCCDDCNRIHVALQNIVLNGAENIPASLFNLIVRKHMEKGIFIDRTVNDVQWRILSGKSRYPVDLPLLSRVVAMFRECFDPIVANSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSVVVSAGLLRIFGRQVAELPIVATSREHQRKGYFQVLFSCIERLLCSLKVENVVLPAAEDAESIWTKKLGFRRMSEDQLKKYLREVQLTIFKGTSMLEKVVERTPE 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 56857825 56863866 - Bda018314.1 Bda03g01749 5008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda03g01749 849 Pfam Tify domain binding domain 431 480 IPR032308 -
Bda03g01749 849 Pfam Tify domain binding domain 264 318 IPR032308 -
Bda03g01749 849 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 575 636 IPR013083 -
Bda03g01749 849 CDD PHD1_AIRE 497 537 - -
Bda03g01749 849 SUPERFAMILY FYVE/PHD zinc finger 493 541 IPR011011 -
Bda03g01749 849 SUPERFAMILY FYVE/PHD zinc finger 574 631 IPR011011 -
Bda03g01749 849 ProSitePatterns Zinc finger PHD-type signature. 498 537 IPR019786 -
Bda03g01749 849 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 731 820 IPR016181 -
Bda03g01749 849 Pfam PHD-finger 497 539 IPR019787 -
Bda03g01749 849 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 561 IPR013083 -
Bda03g01749 849 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 381 845 - -
Bda03g01749 849 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 37 349 - -
Bda03g01749 849 ProSiteProfiles Zinc finger PHD-type profile. 495 540 IPR019787 -
Bda03g01749 849 PANTHER AUTOIMMUNE REGULATOR 381 845 - -
Bda03g01749 849 Gene3D - 691 844 - -
Bda03g01749 849 ProSitePatterns Zinc finger PHD-type signature. 577 633 IPR019786 -
Bda03g01749 849 MobiDBLite consensus disorder prediction 59 76 - -
Bda03g01749 849 MobiDBLite consensus disorder prediction 1 76 - -
Bda03g01749 849 SMART PHD_3 576 634 IPR001965 -
Bda03g01749 849 SMART PHD_3 497 538 IPR001965 -
Bda03g01749 849 PANTHER AUTOIMMUNE REGULATOR 37 349 - -
Bda03g01749 849 MobiDBLite consensus disorder prediction 25 58 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01749 Bda05g01208 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00726 Bda-Chr2:48115506 Bda03g01749 Bda-Chr3:56857825 7.57E-162 dispersed
Bda03g01701 Bda-Chr3:56428546 Bda03g01749 Bda-Chr3:56857825 1.35E-11 dispersed
Bda03g01749 Bda-Chr3:56857825 Bda10g00577 Bda-Chr10:39749334 5.44E-43 dispersed
Bda03g01749 Bda-Chr3:56857825 Bda05g01208 Bda-Chr5:60040519 1.01E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15771 PF16135 TDBD 1.70E-12 No_clan Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda03g01749 - - csv:101207817 1124.77