Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00009 ATGGGTAGGCTCAGTCTTCTTCTCGTCCTGTCCCTTTCTCTGAATTTCTTCCTCTTCATTTCTCCTTCCTCGTCTCAACTCAGCCAGGGTTTTTACGCCAACATCTGTCCCAACGTCGAAACCTTGGTTAGAAACGCAGTCACCGCGAAATTCCGGCAGACTTTCGTCACTGTTCCTGCTACCCTTCGTCTCTTCTTCCACGACTGCTTCGTCCAGGGGTGCGATGCTTCCGTAATAATTGCTTCGTCTGGAGGGAATAAGGCCGAAAAAGACCACCAAGACAACCTGTCGTTGGCCGGGGATGGGTTTGACACCGTCATTAAAGCCAAAGCAGCCGTTGACGCAGTGGCGAGTTGTAAAAACAGAGTCTCCTGCGCCGATATTCTCGCTTTGGCCGCCCGAGACGTCGTCTTTCTGGCGGGTGGACCTTCGTATCCAGTTGAGCTAGGAAGATTGGACGGGCTTGTTTCTAGAGCTTCCGACGTGGACGGGAAGCTTCCCCAGCCAACCTTCAATCTGAACCAACTGAACTCTCTCTTCTCCGCGAATAGGCTGACCCAACAAGACATGATCGCCCTCTCCGCGGCCCACACGGTGGGATTCTCGCACTGCGCCAAATTCGCCAACAGGATATACAATTTCAGCGCGACAAACCCAGTGGACCCGAGCCTGGACAAGACGTACGCGGCGCAGCTGCAGCAGATGTGCCCGAAAAATGTAGACCCCCTCGTGGCCATCGACATGGACCCCACCACTCCGAGAATATTCGACAACGTCTACTTCGCCAATCTCCGGGCGGGGAAAGGGCTTTTCACTTCGGACCAGGTTCTGTTCACTGACTCCCGCTCCATGCCCACCGTCAATAAGTTGGCCCAGAGCCCATCCGACTTCAACGCTGCCTTTGCCGCTGCCATGACCAATCTTGGTCGGGTCGGAGTGAAGACCGGGTCCAACGGCAACATTCGTCGTGATTGCTCCATCTTCAATACATAA 993 54.48 MGRLSLLLVLSLSLNFFLFISPSSSQLSQGFYANICPNVETLVRNAVTAKFRQTFVTVPATLRLFFHDCFVQGCDASVIIASSGGNKAEKDHQDNLSLAGDGFDTVIKAKAAVDAVASCKNRVSCADILALAARDVVFLAGGPSYPVELGRLDGLVSRASDVDGKLPQPTFNLNQLNSLFSANRLTQQDMIALSAAHTVGFSHCAKFANRIYNFSATNPVDPSLDKTYAAQLQQMCPKNVDPLVAIDMDPTTPRIFDNVYFANLRAGKGLFTSDQVLFTDSRSMPTVNKLAQSPSDFNAAFAAAMTNLGRVGVKTGSNGNIRRDCSIFNT 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 102350 103582 + Bda018820.1 Bda04g00009 5031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00009 330 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Bda04g00009 330 CDD secretory_peroxidase 26 326 IPR033905 GO:0004601|GO:0042744
Bda04g00009 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 Gene3D Peroxidase, domain 2 167 308 - -
Bda04g00009 330 Gene3D - 30 329 - -
Bda04g00009 330 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Bda04g00009 330 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PANTHER - 1 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda04g00009 330 PANTHER PEROXIDASE 1 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00009 Bda-Chr4:102350 Bda14g01274 Bda-Chr14:13578782 1.38E-174 dispersed
Bda04g00009 Bda-Chr4:102350 Bda07g00989 Bda-Chr7:11708940 3.46E-88 transposed
Bda04g00009 Bda-Chr4:102350 Bda01g01717 Bda-Chr1:53256820 6.29E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00009 K00430 - csin:114267042 487.648