Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00052 ATGGCTTACATGTGCAGTGACAGTGGAAATCTGATGGCAATTGCCCAGCAAGTGATGAAGCAGAAACAACGCCAGCAGGAGCAACAGCAACAACCGCAGCAGACGCCTCACCAACTTACTGGCAGCCTCAGTCCGTTTTCTCTTGGTCCTTGGAATAATTCTCAACAAGCTGCGATTTCTAGCTCTCCGGCTATGGATTTTGGCCTCTCCGGCCCCGGCTTTTCAGACCCGTTTCAGGATGCCGGAGGAGGTGAAAGCGGAGAAACTGGGTTTCAGTTCCCGAACCTGGAGCACCACTCTACTGGTTTTAGGTTCTCGGATTTTGACGGCGGCGCTAGTGGTGAGTTTGATTCCGACGAGTGGATGGATAGCTTAATGGCCGGTGGAGGTTCGTCGGATGCCTCCAACTTACCGTCCGGCTGTAACGAGTGGCAAAGTAATACTGAGTTTTGTCTCTACAACGGAAGTCCATTTTCTTCGGGCCCGAGTCGACTAGGCATCACTTGCTCTCCACCGTCCGATCTCAACCGAGTCATTTTCTATGATAATCAAAAGAATCTCAGCCCTCTGCAACCTTTAGTTTCCACCTGGGCCCCACCACCTTCGCCTCTATCTCCACCATCTCCGTTGCAGGACAGTAAAGAAGTCAATCCACCTGTGTCTAGAGTTCAAAAGGACGACACGGGTGACAGATCGTCTAGCTCGCCGGAATCTGAATCAACGCCAACACTCCTCTTAGCCCTGTTGGATTGCGCTCGATTATCTGAATCGGAACCTGATCGAGCGGTGAAAATGCTGATTCAGCTGAGGGAATCATTGTCAGAGAAAGGCGATCCGACTGAGAGGGTTGCGTTTTATTTCTGCGAAGCTCTGTGTAGTAGATTATCACTGCGATCTGAAACCAGCTTAGCTCTATGTGCGACAACGACGGAGGAGTTTTCTCTCTCTTACAAAGCTCTCAACGATGCTTGTCCCTATTCGAAATTTGCTCATTTGACTGCAAATCAAGCGATTCTAGAAAGTACAGAAAAAGCGAACAAGATTCACATAATAGATTTTGGAATTGTACACGGCGTTCAATGGGCGGCACTTTTACAAGCTATGGCAACTCGTTCTTCTGGAAAACCAGGTAAAATTCGAATTTCTGGCATACCTGCTGCAGCGTTGGGGAAAGCGCCAGATGCTTCCTTGATTGCCACTGGTAACCGGCTGAGTGAGTTTGCAAAGCTTCTCGAATTGAACTTCGAATTTGATCCAATCCTTACTCCAATTGAGGAGCTGAGTGAATTGAGCTTCCGTGTCGAGTCCGATGAGGTTCTTGCTGTCAATTTCATGCTGCAGTTGTACATCCTGTTGGATGAAAGCCCGGCTGGGGTTCAGAATGCTCTCCGGCTGGCGAAATCGATGAACCCTAGGATCGTGACACTGGGGGAATACGAAGCAAGCTTGAATCAGGTTGGATTTGTGAAACGATTCAAGAATGCACTGAAATACTATTCAGCCTTGTTCGAGTCTCTAGAACCAAACATGAACCGTGAATCACCAGAGAGACTGCAGCTGGAAAAGCATCTTCTCGGCCGTCGAATCGCAGGTGTAGTTGGGCCAGAAAGTTTAGGCGCGAAAAGAGAGCGGATGGACGACAAGGAGCGGTGGAAAATGCTAATGGAAAGCTCCGGATTTTCTACCGGGTCGATCAGCCATTACGCAGTCAGTCAGGCAAAGATCCTTCTGTGGAATTACAACTACAGCTCTTTGTATTCTTTGATAGAATCACCTCCTGGGTTTCTCTCTCTGGCATGGAATGAGGTTCCTCTTCTCACTGTTTCTTCATGGCGGTAA 1839 48.67 MAYMCSDSGNLMAIAQQVMKQKQRQQEQQQQPQQTPHQLTGSLSPFSLGPWNNSQQAAISSSPAMDFGLSGPGFSDPFQDAGGGESGETGFQFPNLEHHSTGFRFSDFDGGASGEFDSDEWMDSLMAGGGSSDASNLPSGCNEWQSNTEFCLYNGSPFSSGPSRLGITCSPPSDLNRVIFYDNQKNLSPLQPLVSTWAPPPSPLSPPSPLQDSKEVNPPVSRVQKDDTGDRSSSSPESESTPTLLLALLDCARLSESEPDRAVKMLIQLRESLSEKGDPTERVAFYFCEALCSRLSLRSETSLALCATTTEEFSLSYKALNDACPYSKFAHLTANQAILESTEKANKIHIIDFGIVHGVQWAALLQAMATRSSGKPGKIRISGIPAAALGKAPDASLIATGNRLSEFAKLLELNFEFDPILTPIEELSELSFRVESDEVLAVNFMLQLYILLDESPAGVQNALRLAKSMNPRIVTLGEYEASLNQVGFVKRFKNALKYYSALFESLEPNMNRESPERLQLEKHLLGRRIAGVVGPESLGAKRERMDDKERWKMLMESSGFSTGSISHYAVSQAKILLWNYNYSSLYSLIESPPGFLSLAWNEVPLLTVSSWR 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 867857 869695 - Bda018770.1 Bda04g00052 5074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00052 612 MobiDBLite consensus disorder prediction 17 63 - -
Bda04g00052 612 MobiDBLite consensus disorder prediction 17 95 - -
Bda04g00052 612 MobiDBLite consensus disorder prediction 194 208 - -
Bda04g00052 612 Pfam GRAS domain family 247 612 IPR005202 -
Bda04g00052 612 MobiDBLite consensus disorder prediction 219 233 - -
Bda04g00052 612 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 245 611 - -
Bda04g00052 612 ProSiteProfiles GRAS family profile. 235 612 IPR005202 -
Bda04g00052 612 MobiDBLite consensus disorder prediction 192 241 - -
Bda04g00052 612 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 245 611 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00052 Bda11g01872 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00052 Bda-Chr4:867857 Bda07g01379 Bda-Chr7:16636008 2.64E-57 dispersed
Bda11g00430 Bda-Chr11:4552074 Bda04g00052 Bda-Chr4:867857 2.72E-38 dispersed
Bda11g01872 Bda-Chr11:53768324 Bda04g00052 Bda-Chr4:867857 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15778 PF03514 GRAS 6.40E-103 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00052 - - zju:107424599 809.675