Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00055 GAAATGGCTTCTTCTCCTGAGACTGCTCCGTCGCCGGACTCTTCTTCTTCCCAGGAATCCCCGCCGCCGCCTCCTAATGACTCAGCCGAGTCACCCCCTCCTCCGCCTCCGCCATCTTCCTCCAAATCACCTCCCCCACCGCCGCAAGACGACTACGTTTCTCCGCCAGCACCGCCTCCTCCTCCTACTTCATCGTCTTCGTCCTCTAAAACAATATCTCCTCCTCCTCCTCCGCCGCCGACATCATCCGAGGCATCCAGTTCTTCCTCGTCTTCAAATCATAACCTACCAGTTATAATCGGAGTAGCAGCCGGAGTTGGTCTATTGATAATCGCCATACTCATAATCTTCGCAATATGCTCGAGGAAAAAGAGAAAGCGAGAGGAAGAGGAATATTACAGAGACCCCAACGAAGGTCGCAAAAATGGCAATTATTACAACAATTCGCAACCAAATTGGCATGGAGTGGACCATTTTAACAGGCCAACGCCCCTGCCCGGTTCGAGTGAGTCAATGGGAGGCCCATGGCCCGCACCTCCACCGCCTCCTCCTATGGGGGCGAGCGGCGAATCGAGCTCGAACTTCTCCGGCCCAAGGCAAATGCCGCTTCCCCCGCCGTCACCAAACCTCGCGCTGGGGTTCAATAAGAGCACATTCACGTACGACGAACTGGCGGCGGCGACCGGCGGGTTTTCACAGGCGAATCTGCTTGGGCAAGGTGGATTTGGGTACGTCCATAAGGGAGTTCTTCCCAACGGCAAAGAAATCGCCGTGAAAAGCCTCAAGTCAGGGAGTGGACAAGGAGAGAGAGAATTCCAGGCGGAAGTCGAAATTATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCAGGTGGACAGAGGATGTTGGTTTATGAATTTGTCCCTAACAAGACATTGGAACATCACCTCCATTCTAAGAATCTTGCTACCATGAACTTGCCCACCAGGCTACGCATTGCTATTGGATCTGCAAAAGGGCTTGCTTATCTTCACGAGGACTGCCATCCTCGGATTATACATCGTGATATAAAATCTGCAAATATTCTCCTCGACTTCAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCAAAGCTCTCTTCTGACAACTACACTCACGTCTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCAGCAAGCGGCAAATTGACTGAGAAATCGGATGTATTCTCGTTTGGGGTTATGCTGTTGGAGCTCATAACTGGAAAAAAACCAGTGGATCCAAGTAATGCAATGGAGGATAGCTTAGTTGACTGGGCTCGACCGCTTTTAAGCCGAGCACTTGAGGATGGAAACTACGATGGGCTGGTCGATATTCGCTTGGAAAATAACTTTAACCCTCAAGAGATGGCAAGATTGATCGCTTGTGCTGCAGCTAGCATTCGCCATTCTGCTCGAAAGCGCCCAAGAATGAGCCAGATCGTGCGAGCATTGGAAGGGGACGTGTCATTGGACGACTTGAAAGACAGGGGTGTGAGAGCGGGGGAGAGCTTGGTGGTCACCTCGAACGAAAGCTCATTGGACTACGATACAAAGGCATACAATGCAGACATGATGAAGTTTAGGCAGATGGCCCTGTCCAGCCAGGAGTTTGCAAGCAGTGAGCATGGAACTTCCAGCAGTGACTCAGGCAACCAAAAACAGTACCTTTGA 1728 50.93 EMASSPETAPSPDSSSSQESPPPPPNDSAESPPPPPPPSSSKSPPPPPQDDYVSPPAPPPPPTSSSSSSKTISPPPPPPPTSSEASSSSSSSNHNLPVIIGVAAGVGLLIIAILIIFAICSRKKRKREEEEYYRDPNEGRKNGNYYNNSQPNWHGVDHFNRPTPLPGSSESMGGPWPAPPPPPPMGASGESSSNFSGPRQMPLPPPSPNLALGFNKSTFTYDELAAATGGFSQANLLGQGGFGYVHKGVLPNGKEIAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHSKNLATMNLPTRLRIAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDFNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELITGKKPVDPSNAMEDSLVDWARPLLSRALEDGNYDGLVDIRLENNFNPQEMARLIACAAASIRHSARKRPRMSQIVRALEGDVSLDDLKDRGVRAGESLVVTSNESSLDYDTKAYNADMMKFRQMALSSQEFASSEHGTSSSDSGNQKQYL 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 890864 893510 - Bda018767.1 Bda04g00055 5077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00055 575 MobiDBLite consensus disorder prediction 173 187 - -
Bda04g00055 575 Gene3D Transferase(Phosphotransferase) domain 1 307 516 - -
Bda04g00055 575 Pfam Protein tyrosine and serine/threonine kinase 234 441 IPR001245 GO:0004672|GO:0006468
Bda04g00055 575 MobiDBLite consensus disorder prediction 16 83 - -
Bda04g00055 575 MobiDBLite consensus disorder prediction 1 15 - -
Bda04g00055 575 SMART serkin_6 231 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00055 575 SUPERFAMILY Protein kinase-like (PK-like) 206 503 IPR011009 -
Bda04g00055 575 MobiDBLite consensus disorder prediction 1 93 - -
Bda04g00055 575 Gene3D Phosphorylase Kinase; domain 1 209 306 - -
Bda04g00055 575 MobiDBLite consensus disorder prediction 125 208 - -
Bda04g00055 575 MobiDBLite consensus disorder prediction 141 156 - -
Bda04g00055 575 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Bda04g00055 575 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 6 562 - -
Bda04g00055 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Bda04g00055 575 ProSiteProfiles Protein kinase domain profile. 231 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00055 575 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 6 562 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00055 Bda10g00129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00055 Bda-Chr4:890864 Bda08g00923 Bda-Chr8:16984613 0 dispersed
Bda10g00129 Bda-Chr10:3557155 Bda04g00055 Bda-Chr4:890864 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69582 PF07714 PK_Tyr_Ser-Thr 7.30E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00055 - - rcu:8273399 679.093