Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00113 ATGGCTTTCACTGCGCCGGAAAATCTATCCAGGGACCAATACGTTTACCTGGCGAAGCTATCGGAGCAGGCGGAGCGGTATGAGGAGATGGTCCAGTTTATGGAGAAGCTCGTGGTTATTTCCACTCCTTCCTCCGAGCTCACAGTGGAGGAACGTAACCTAATCTCGGTTGCCTATAAGAACGTGATCGGAGCTCTTCGAGCGGCCTGGCGTATCGTTTCCTCGATAGAACAGAGGGAGGAGGGCAGGAAGAATGAGGAGCATGTGGTGCTTGTGAAGGAGTATAGATCGAAGGTGGAATCAGAGCTCTCGGTTGTGTGCGCTGGAATTTTGAAGCTTTTAGATTCGCATCTGGTGCCGTCTGCATCGAGCGGCGAATCTAAGGTGTTTTATTTGAAGATGAAAGGTGATTACCATAGGTATACGGCCGAATTCAAGGTTGGTGATGAGAGGAAAGCCGCAGCTGAGGATACTATGCTGGCTTATAAGGCTGCTCAGCTGAAACATGCTTTTCTACTGCTACTATCATTTTTTGCTAGATCATTTAATCTTTTTATTTCATTTTTGAAGGATATAGCAATTGCTGATCTGCCTCCGACACATCCTATAAGGCTCGGGCTGGCGCTAAACTTCTCTGTGTTTTACTACGAGATTCTTTCTTCCTCGGAGAAAGCTTGTAGTATGGCCAAACAGGGCATAAAGATATTCTTCGCCTTTGAGGAAGCCATCGCTGAGCTGGATACTCTTGGCGAAGAGTCCTACAAGGACAGCACTCTCATCATGCAGCTCCTGAGGGACAATCTTACTCTATGGACTTCCGATATGCAGGTAGGTGTAAATTTTGATACAAAGAGTATTTAG 861 46.69 MAFTAPENLSRDQYVYLAKLSEQAERYEEMVQFMEKLVVISTPSSELTVEERNLISVAYKNVIGALRAAWRIVSSIEQREEGRKNEEHVVLVKEYRSKVESELSVVCAGILKLLDSHLVPSASSGESKVFYLKMKGDYHRYTAEFKVGDERKAAAEDTMLAYKAAQLKHAFLLLLSFFARSFNLFISFLKDIAIADLPPTHPIRLGLALNFSVFYYEILSSSEKACSMAKQGIKIFFAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVGVNFDTKSI 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2557350 2559702 - Bda018679.1 Bda04g00113 5135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00113 286 Coils Coil 17 37 - -
Bda04g00113 286 PANTHER BNAA09G52470D PROTEIN 190 279 - -
Bda04g00113 286 PANTHER 14-3-3 PROTEIN 190 279 IPR000308 -
Bda04g00113 286 ProSitePatterns 14-3-3 proteins signature 2. 254 273 IPR023409 -
Bda04g00113 286 SMART 1433_4 11 285 IPR023410 -
Bda04g00113 286 SUPERFAMILY 14-3-3 protein 10 274 IPR036815 -
Bda04g00113 286 Gene3D - 1 281 IPR036815 -
Bda04g00113 286 PANTHER BNAA09G52470D PROTEIN 7 166 - -
Bda04g00113 286 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Bda04g00113 286 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Bda04g00113 286 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Bda04g00113 286 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Bda04g00113 286 Pfam 14-3-3 protein 191 272 IPR023410 -
Bda04g00113 286 Pfam 14-3-3 protein 17 166 IPR023410 -
Bda04g00113 286 PANTHER 14-3-3 PROTEIN 7 166 IPR000308 -
Bda04g00113 286 PIRSF 2014/3/3 185 284 IPR000308 -
Bda04g00113 286 PIRSF 2014/3/3 6 174 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00113 Bda-Chr4:2557350 Bda13g01756 Bda-Chr13:40903858 4.65E-131 dispersed
Bda03g00463 Bda-Chr3:3995600 Bda04g00113 Bda-Chr4:2557350 7.26E-156 transposed
Bda10g00066 Bda-Chr10:1298363 Bda04g00113 Bda-Chr4:2557350 1.43E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00113 K06630 - twl:119995071 409.068