Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00148 ATGAAGCTGCTTCTTCTCCTCCTCCTGCTTCTTCACCTCCACATTATGCCTTCTCTCGCCGCTCGGATATCCGAATACCGTGCTCTTCTCTCTCTTAAAAGCTCCATTTCAGACGACCCCAGCTCCTTTCTCTCCTCTTGGAAGCTCTCTACTAGCCACTGTACCTGGGCTGGTGTTTCCTGCGATAATCGCCGTCATGTCGTTAGTCTTGACCTCTCTGGCGTTAATCTCTCCGGCTTGCTTTCGCCTGATGTTGCTTACCTTGGATTTCTTACGAATCTTTCGCTCGCTGTTAATCAGTTCTCCGGCCCAGTTCCGCCGGAGATGTCTGCTCTTGCTGCACTCCGATACCTTAACCTTTCGAATAACTTTTTCAATGGTACATTCCCTTCTGAACTGGCGGAACTGAAAAACTTGCAGGTTTTGGATTTGTATAACAACAACATGACCGGAGATTTGCCTCTTGCGGTGACGGAGCTGCCGAACCTCAGACATTTGCATCTGGGTGGGAACTTTTTCCTCGGTCGGATTCCGGCGGAGTACGGTCGGTGGGAGTCATTGGAGTATTTGGCGGTCTCCGGTAACGAGCTTGAAGGACCCATTCCGCCGGAGATCGGAAACTTGGGGAAGCTTCGAGAACTCTACATTGGGTATTACAACAACTATGAAGGTTCTTTACCGGCGGAGATCGGAAATTTGTCATCGTTGGTACGGTTCGACGCTGCCAACTGTGGGTTAACCGGTGAAATACCGCCAGAGCTGGGAAAACTTCTGAATCTCGACACTCTGTTTCTTCAAGTGAATGCGCTATCTGGGTTTTTGACATCTGAACTTGGGATGTTAAAGAGCTTGAAGTCAATGGATTTGTCTAACAATGTCCTCTCTGGTGAGATTCCAGTTTCATTCTCCGATCTGAAGAACTTGACGCTGTTAAACCTGTTTAGAAACCAGCTTCACGGAACGATTCCGGACTTCATCGGAGACTTGCCGGAGTTAGAAGTGTTGCAGTTGTGGGAAAATAACCTCACCGGTTGGATTCCTCAGGGTCTCGGAAAGAATGGGAAGCTTCAGCTTCTCGATCTTTCTTCTAACAAGCTAACCGGAACTCTTCCTCCGGAAATGTGCTCCGGCAATAGCCTTCAGACTCTGATTATTCTTGGAAATTTCTTGTTCGGCCCGATTCCGGAGTCTCTTGGGAAATGCCAGTCGCTCAGTCGTATTCGAATGGGGGGAAATTTTCTCAATGGATCGATCCCGAATGGTCTCTTTGATTTGCCAAAGCTTACTCAGGTCGAATTGCAAAACAACTATCTCGCCGGAGACTTTCCGGTTATACTTTCGATATCGGGGAATCTCGGTCAGATTAGTCTGTCAAACAATCAACTTTCTGGGTCATTGCCACCCACTATTGGAAACTTCTCCGGCGTGCAGAAACTTCTCCTCGACGGAAACAATTTCTCCGGTCCAATACCATCTGAGATCGGAAAGTTACAACAGCTATCAAAGATCGATTTCAGCCAAAACCAGTTCTCCGGTTCGATTACACCAGAAATAAGCAAATGCAAGCTCCTTACGTTCGTTGATCTCAGTAGAAACGAGCTCTCCGGCGAGATTCCGAACGAGATTACCTCCATGAGGATACTGAATTATCTGAACCTATCTAGAAACCATTTAGTTGGAAACGTTCCTTCTTCCATAGCCTCAATGCAGAGCTTAACTTCTGTAGATTTTTCCTACAACAACCTCTCCGGTTTAATTCCCGGCTCCGGCCAATTCAGCTATTTTAATGCCACGTCATTTCTCGGCAATCCCAATCTCTGCGGCCCTTACTTAGGACCTTGCAAAAATGGAGTCGCGAATTCCATGGAACAATCTCATGCGAAATCCCATCTATCAGCTTCTCTGAAGCTCCTGCTAGTTATTGGATTGCTCGTCTGCTCCATTGCATTCGCCATTGTAGCAATTATAAAAGCTCGATCATTAAAACGAGGGAGTGCAGCTAGAGCATGGAAATTAACAGCCTTTCAACGCTTGGATTTTACAGCGGACGATGTTTTAGATTCCTTGAAAGAAGATAACATCATCGGAAAAGGAGGGGCTGGAATAGTTTACAAAGGGTCTATGCCAAACGGGGAAATCATTGCCATCAAACGACTTCCAGCGATGAGCCGTGGTTCTTCACATGATCACGGATTCAACGCCGAGATTCAAACTCTGGGGAGGATTCGACATCGTCACATCGTTAGATTACTGGGTTTTTGTTCAAATAGCGAGACAAATCTTCTGGTGTATGAGTACATGCCTAATGGAAGCTTGGGGGAAGTTCTTCATGGCAAAAAAGGAGGACATTTGCAGTGGAACACTAGATATAAAATCGCCATTGAATCCGCCAAAGGTCTCTGCTATCTTCACCATGATTGTTCGCCTTTGATAGTTCATCGAGATGTGAAATCAAATAACATCTTGTTGGACTCCAGTTTCGAAGCTCACGTTGCAGATTTCGGCCTCGCCAAGTTTTTGCAGGACTCGGGTACTTCCGAGTGCATGTCCGCCATTGCTGGATCTTATGGATACATAGCCCCAGAATATGCTTATACTCTGAAGGTTGACGAGAAGAGCGACGTTTACAGTTTCGGAGTAGTTTTGCTAGAGCTGGTTAGTGGAAGAAAACCAGTAGGAGAATTTGGCGATGGCGTCGACATTGTTCAGTGGGTTCGAAAAATGACAGATTCAAACAAGGAAAGAGTCCTCAACATCATCGACCAGAGACTTTCTTCTGTTCCTCTTCACGAAATAATGCATGTCTTCTACGTCGCCTTGCTCTGCGTGGAAGAACAGGCGATTGAGCGACCCACCATGCGAGAGGTCGTTCAGATCTTAACCGAGCTTCCCAAGCCTCCGACAATGGCGGACTCTTCTCCTGCGATACCCACGTCTTCGAATTCTCCCCCTCCTCCGGATCTTCTCAGCATTTGA 2976 46.81 MKLLLLLLLLLHLHIMPSLAARISEYRALLSLKSSISDDPSSFLSSWKLSTSHCTWAGVSCDNRRHVVSLDLSGVNLSGLLSPDVAYLGFLTNLSLAVNQFSGPVPPEMSALAALRYLNLSNNFFNGTFPSELAELKNLQVLDLYNNNMTGDLPLAVTELPNLRHLHLGGNFFLGRIPAEYGRWESLEYLAVSGNELEGPIPPEIGNLGKLRELYIGYYNNYEGSLPAEIGNLSSLVRFDAANCGLTGEIPPELGKLLNLDTLFLQVNALSGFLTSELGMLKSLKSMDLSNNVLSGEIPVSFSDLKNLTLLNLFRNQLHGTIPDFIGDLPELEVLQLWENNLTGWIPQGLGKNGKLQLLDLSSNKLTGTLPPEMCSGNSLQTLIILGNFLFGPIPESLGKCQSLSRIRMGGNFLNGSIPNGLFDLPKLTQVELQNNYLAGDFPVILSISGNLGQISLSNNQLSGSLPPTIGNFSGVQKLLLDGNNFSGPIPSEIGKLQQLSKIDFSQNQFSGSITPEISKCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSRNHLVGNVPSSIASMQSLTSVDFSYNNLSGLIPGSGQFSYFNATSFLGNPNLCGPYLGPCKNGVANSMEQSHAKSHLSASLKLLLVIGLLVCSIAFAIVAIIKARSLKRGSAARAWKLTAFQRLDFTADDVLDSLKEDNIIGKGGAGIVYKGSMPNGEIIAIKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNSETNLLVYEYMPNGSLGEVLHGKKGGHLQWNTRYKIAIESAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKERVLNIIDQRLSSVPLHEIMHVFYVALLCVEEQAIERPTMREVVQILTELPKPPTMADSSPAIPTSSNSPPPPDLLSI 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4062338 4065407 + Bda018629.1 Bda04g00148 5170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00148 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Bda04g00148 991 Gene3D Ribonuclease Inhibitor 223 341 IPR032675 -
Bda04g00148 991 MobiDBLite consensus disorder prediction 964 991 - -
Bda04g00148 991 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Bda04g00148 991 Gene3D Ribonuclease Inhibitor 135 222 IPR032675 -
Bda04g00148 991 Gene3D Transferase(Phosphotransferase) domain 1 767 972 - -
Bda04g00148 991 SUPERFAMILY RNI-like 69 391 - -
Bda04g00148 991 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 977 - -
Bda04g00148 991 SUPERFAMILY Protein kinase-like (PK-like) 684 960 IPR011009 -
Bda04g00148 991 Pfam Leucine Rich repeats (2 copies) 137 177 IPR025875 -
Bda04g00148 991 Gene3D Phosphorylase Kinase; domain 1 663 766 - -
Bda04g00148 991 ProSiteProfiles Protein kinase domain profile. 689 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00148 991 SMART LRR_typ_2 305 328 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 112 136 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 329 353 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 569 592 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 497 521 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 160 184 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 281 304 IPR003591 -
Bda04g00148 991 SMART LRR_typ_2 354 377 IPR003591 -
Bda04g00148 991 SUPERFAMILY L domain-like 298 616 - -
Bda04g00148 991 SMART serkin_6 689 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00148 991 Pfam Leucine Rich Repeat 115 133 IPR001611 GO:0005515
Bda04g00148 991 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Bda04g00148 991 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Bda04g00148 991 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 977 - -
Bda04g00148 991 Gene3D Ribonuclease Inhibitor 342 618 IPR032675 -
Bda04g00148 991 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00124 Bda-Chr3:1080363 Bda04g00148 Bda-Chr4:4062338 2.22E-168 dispersed
Bda04g00148 Bda-Chr4:4062338 Bda07g01663 Bda-Chr7:30876669 0 dispersed
Bda11g00199 Bda-Chr11:2542397 Bda04g00148 Bda-Chr4:4062338 9.84E-155 dispersed
Bda11g00657 Bda-Chr11:6504448 Bda04g00148 Bda-Chr4:4062338 9.50E-24 dispersed
Bda14g01625 Bda-Chr14:41485244 Bda04g00148 Bda-Chr4:4062338 2.92E-48 dispersed
Bda05g01001 Bda-Chr5:58455944 Bda04g00148 Bda-Chr4:4062338 3.00E-08 transposed
Bda12g00552 Bda-Chr12:9114461 Bda04g00148 Bda-Chr4:4062338 4.07E-128 transposed
Bda15g00023 Bda-Chr15:1609102 Bda04g00148 Bda-Chr4:4062338 2.77E-08 transposed
Bda10g00028 Bda-Chr10:508517 Bda04g00148 Bda-Chr4:4062338 0 wgd
Bda11g01541 Bda-Chr11:47731550 Bda04g00148 Bda-Chr4:4062338 0 wgd
Bda13g01341 Bda-Chr13:35721352 Bda04g00148 Bda-Chr4:4062338 7.37E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69583 PF07714 PK_Tyr_Ser-Thr 1.10E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00148 - - mnt:21399160 1577.38