Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00178 ATGGAGAGTAATGACGAAGAGGGTGAAGAGTTCGGATTCTCTAGGAACTATTTTTTGGCAAAAGAACTGGGGGGCTCATCTAAGAAATCAACTCACACGCTCTCTGACATTGATATCGTCGATGAACAGGTTTTAGTAGCATTGGCTGAAGTTCTGTGGGATCAATTGAAAATCAGACGAACAGGAAATTTGCCTAAAGGCCAACAACCGTTTAATTCTCGATCGGTGGATGACCTTATTTCCTTTTTGGATGGACCAAAGTTGGAGGAAAATGACCCTTTTATATGTGTTGTTATTCATAACATTGATGGTCCAGGATTAAGAGATTCTGACGTGCATCAATATTTGGGTCGACTCGCTGGTTGCTCCCATATTCGTATTATTGCTTCTATTGACCATATTAATGCACCACTATTGTGGGACAAGAAGATGGTTCACACCCAGTTTAACTGGTGTTGGTATCATGTTCCTACCTTTGCACCATATACAGTCGAAGGCACGTTTTTTCCATTGATTCTTGCGCAGGCAAGTTCAGGCCAAAGTGCAAAAACTGCAACAATCGTTTTGCAGAGTTTGACGCCCAATGCTCAAAGCGTTTTCAAAGTTCTGGCTAAACATCAACTCTCTCATCCTGATGAAGAAGGAATGCCAATGAGTGAGTTGTATGCGGTTTGTCGAGAGTTGTTTTTGGTGAGTAGTCAGGTTACGCTAAACTCCCACTTGACCGAGTTTAAAGACCATGAGTTGGTGAAGAGCAGAAGGCATGCCGAGGGGCAGGATTGCTTGTTCATTCCCCTCTCATCAGAAGCACTTGCAAAGCTATTGCTGGAGATCATATAG 840 42.86 MESNDEEGEEFGFSRNYFLAKELGGSSKKSTHTLSDIDIVDEQVLVALAEVLWDQLKIRRTGNLPKGQQPFNSRSVDDLISFLDGPKLEENDPFICVVIHNIDGPGLRDSDVHQYLGRLAGCSHIRIIASIDHINAPLLWDKKMVHTQFNWCWYHVPTFAPYTVEGTFFPLILAQASSGQSAKTATIVLQSLTPNAQSVFKVLAKHQLSHPDEEGMPMSELYAVCRELFLVSSQVTLNSHLTEFKDHELVKSRRHAEGQDCLFIPLSSEALAKLLLEII 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5244731 5247420 + Bda018585.1 Bda04g00178 5200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00178 279 Pfam Origin recognition complex subunit 2 58 269 IPR007220 GO:0000808|GO:0005634|GO:0006260
Bda04g00178 279 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 42 277 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00178 Bda-Chr4:5244731 Bda08g01342 Bda-Chr8:53755860 3.33E-21 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00178 K02604 - csin:114287574 380.178