Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00191 ATGGAGACTCTCCATTACCCAATCTCCTTGTCCAAATCCAAGTCGCTGTTGCATTGTATACAAGACAGACGAATCAAGTCGCTGAGAGGTGTATCTCTTTGCTCTCTACGGTTTTCTACAAGGGGTATCGAGCCCTTCCCAGCTTTTCCTTCTAAGGCTTCAAATTTTAATAATATCCGTTTTGGGCGTTTTCATTGCGTCTCCGAGTCCGCTGATCGTCACCATGATGACCATCACCATCACCACTGCCACCACAACCACCACAACCACCACCATTGCAATGATGGTACGGAGCTGACAGAACCTCAAAAGGCGTTAATTAGCTTCGCCAAAGCCACTAAGTGGATAGACTTGGCCAATTATCTGAGAGAGCACCTAAAACTGTGTTGTGCTTCCACTGCTTTGTTTGTTGCTGCTGCCGCTTGTCCTTACTTAGTGCCCAAGCACGCAGTGAAGCCTCTGCAGAATGCGTTCATAGTCTCAGCTTTCCCTCTAGTTGGGGTGTCTGCGTCTCTTGATGCTCTTACTGATATCTGTGGTGGGAAAGTTAACATTCATGTTCTGATGGCACTTGCTGCCTTTGCATCAATATTTATGGGGAACTCTATAGAAGGAGGACTACTTCTTGCCATGTTTAATCTAGCTCATATTGCTGAAGAGTATTTCACCAGCCGATCAATGGTTGATGTTAAAGAGTTGAAAGAAAATTATCCTGAATATGCGCTAGTCCTGGACATTAATGATGACCAGCTTCCTAATACTTCAGAGTTGGCATATAAAAGTGTGCAAGTGCATGATGTAGAAGTTGGCTCATATATCTTGATTCTTGCTGGGGAGTCTGTGCCTGTAGATTGTGAAGTTTACCAAGGTAGTGCAACAATTACCGTTGAGCACTTAACAGGAGAAGTCAAACCTCTAGAGATAAATGTTGGAGATCGGGTACCCGGTGGTGCAAGAAATTTGGATGGAAGAATAGTAGTGAAGGTGATAAAAACTTGGAAAGAATCTACTCTGAACAAGATAGTGCAGCTAACTGAAGAAGCACAGATGAATAAGCCAAAGCTTCAAAGGTGGCTCGATGAATTTGGTGAACAGTACAGCAAGGTGGTTGTTGTTTTGTCTGTTGCAATTGCCATCATTGGGCCATTATTATTCAAGTGGCCCTTTATTTGTACACCAGCTTGCAGAGGATCAATCTATAGAGCACTGGGCCTTATGGTGGCAGCATCACCATGTGCCCTGGCCGTTGCTCCATTGGCATACGCTACTGCAATTAGTTCCTGTGCCAGAAAGGGAATACTACTTAAAGGTGGGCATGTGCTAGATGCTTTGGCTTCTTGCCAGACAATCGCATTTGATAAAACTGGGACACTGACTACTGGCGGGCTTGTGTTTAAAGCAATTGAACCAATCTATGGACATAGGGTCATACAAAATAAATCAGATTTTTCTTCTTGTTGCATTCCTAGCTGTGAAAAAGAAGCGCTTGCTGTGGCAGCGGCAATGGAGAAGGGTACTACTCATCCAATTGGAAGAGCCGTGGTTGACCATAGTGTGGGAAAAGACCTTCCTCCAATATCTGTTGAAAGTTTCGAGTATTTTCCGGGTAAAGGTCTGGTAGCAACTCTGCATGGCATCAAGTCAGGAACTGGAATGGGAAAACTGTTGACAGCATCCCTTGGTTCTGTTGATTTCATTACTTCACTTTGTAAATCTAAAACAGAGTCTAGAAAGGTTCAGGAAGCTGTGAATGCATCGTCTTATGGAAGAGAATTTGTTTGTGCTGCTCTTTTAGTGGATGAAAAGATAACACTGATTCACCTAGAAGATCGTCCTCGACCTGGAGTATTAGATGTCATAGTTGACTTGCAAGATCATGCAAAACTCCGCGTAATGATGCTAACAGGAGATCACGAGTCAAGTGCACGGAGAGTTGCCAATGCAGTGGGCATCAAGGAAGTTTATTGTGGTCTGAAACCTGAAGATAAGCTTAGTTATGTGAAGGATATCTCAAGGGAGACAGGTGGAGGTTTGATAATGGTTGGCGAAGGGATTAACGATGCACCAGCTCTTGCTGCAGCCTCAGTTGGAATAGTACTTGCTCAACGTGCTAGTGCAACTGCCGTGGCGGTTGCAGATGTTCTTCTACTGCGAGACAACATCCTTGGTGTGCCATTTTCCATTGCCAAGTCACGCCAAACAACTTCCCTGGTTAAACAGAACGTCGCCCTTGCATTAACATCTATTTTTTTGGCTTCCCTTCCATCTGTGCTGGGGTTTGTGCCCTTATGGTTAACGGTTCTTTTACATGAAGGTGGTACGCTTATGGTTTGCCTTAACTCAGTACGTGCTCTTAATAACCCAACTTGGTCATGGAGGCAAGACTTGCTACATCTTTTTAATGACTGCAGTTCCAAAATTGCAGCATTGACTCCTAAACCCAGTTCTAGCTACACTGAAGCTGCCCAATTGTAA 2475 44.24 METLHYPISLSKSKSLLHCIQDRRIKSLRGVSLCSLRFSTRGIEPFPAFPSKASNFNNIRFGRFHCVSESADRHHDDHHHHHCHHNHHNHHHCNDGTELTEPQKALISFAKATKWIDLANYLREHLKLCCASTALFVAAAACPYLVPKHAVKPLQNAFIVSAFPLVGVSASLDALTDICGGKVNIHVLMALAAFASIFMGNSIEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENYPEYALVLDINDDQLPNTSELAYKSVQVHDVEVGSYILILAGESVPVDCEVYQGSATITVEHLTGEVKPLEINVGDRVPGGARNLDGRIVVKVIKTWKESTLNKIVQLTEEAQMNKPKLQRWLDEFGEQYSKVVVVLSVAIAIIGPLLFKWPFICTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCQTIAFDKTGTLTTGGLVFKAIEPIYGHRVIQNKSDFSSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPPISVESFEYFPGKGLVATLHGIKSGTGMGKLLTASLGSVDFITSLCKSKTESRKVQEAVNASSYGREFVCAALLVDEKITLIHLEDRPRPGVLDVIVDLQDHAKLRVMMLTGDHESSARRVANAVGIKEVYCGLKPEDKLSYVKDISRETGGGLIMVGEGINDAPALAAASVGIVLAQRASATAVAVADVLLLRDNILGVPFSIAKSRQTTSLVKQNVALALTSIFLASLPSVLGFVPLWLTVLLHEGGTLMVCLNSVRALNNPTWSWRQDLLHLFNDCSSKIAALTPKPSSSYTEAAQL 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6168047 6177818 - Bda018563.1 Bda04g00191 5213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00191 824 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Bda04g00191 824 Gene3D - 223 349 - -
Bda04g00191 824 Gene3D - 444 732 IPR023214 -
Bda04g00191 824 SUPERFAMILY HAD-like 449 781 IPR036412 -
Bda04g00191 824 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 185 783 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bda04g00191 824 Pfam haloacid dehalogenase-like hydrolase 448 694 - -
Bda04g00191 824 Pfam E1-E2 ATPase 259 431 - -
Bda04g00191 824 PRINTS P-type cation-transporting ATPase superfamily signature 705 717 - -
Bda04g00191 824 PRINTS P-type cation-transporting ATPase superfamily signature 604 615 - -
Bda04g00191 824 PRINTS P-type cation-transporting ATPase superfamily signature 627 637 - -
Bda04g00191 824 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Bda04g00191 824 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
Bda04g00191 824 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 586 761 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda04g00191 824 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 259 472 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda04g00191 824 SFLD C1.7: P-type atpase like 433 734 - -
Bda04g00191 824 SFLD p-type atpase 433 734 IPR044492 -
Bda04g00191 824 CDD P-type_ATPase_HM 128 783 - -
Bda04g00191 824 Gene3D - 462 612 IPR023299 GO:0000166
Bda04g00191 824 SUPERFAMILY Calcium ATPase, transduction domain A 260 344 IPR008250 -
Bda04g00191 824 SUPERFAMILY Calcium ATPase, transmembrane domain M 187 750 IPR023298 -
Bda04g00191 824 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 815 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00191 Bda-Chr4:6168047 Bda11g00103 Bda-Chr11:1242806 9.97E-58 dispersed
Bda04g00191 Bda-Chr4:6168047 Bda04g00194 Bda-Chr4:6420544 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00191 K01534 - qsu:112030040 1183.7