Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00197 ATGGCAGAGTCATTTTCCTACGCAGTCCTTTCCCTCGTCTTCCTCCTACTTGCTTTCAAGCTTCTTCTAACAAACAGGAGGAAAAGAAACTTGCCTCCAGGTCCAACTTCTCTACCAATCATCGGCCACCTACATCTTTTGAAGCAACCGCTTCATCGGACATTTAAGGCGTTTGCAGAAAAGTACGGCCATGTCATCTCCCTCAAGTTTGGCTCTCAGCATGTAGTTATTGTTTCCTCTCCAGCTGCAGTTCAGGAATGTTTCACCAAGAACGACGTTATTCTCGCCAATCGCCCAAAATCGCTTGCCGGAAAGCACATCGCCTACAATTACACGACTATGGGGACAGCGCCGTACGGCGAACATTGGCGGAACCTCCGCCGAATTGGCGCCATCGAAATCTTCTCGACGAGCCGCCTCAACGCTTTTTCGGAGATTCGGAAGGACGAAGTAGAGCGGTTGCTGCGAAAGCTGTCCGTTAATTCGCACAACGAGTTCTCAAAAGTAGAATTACAGTCTTTGTTTACGAAGCTGACTTTTAACATCGTGATGAGAATGACGGCCGGGAAGAGGTACTACGGCGACGACGTTGCAGACGAGGAAGAAGCGAGCCGATTCAGAGATATAATGAATCAGGTTACATCCCTTCTGCAGAGCGGGCATCCGGCAGAGGTCTTCCCGATCCTCAAACGGGTCGATCTAACTGGTTATGGTAGGAAGTTAAAGAAGATCGGCAAGAGAAAAGATGAATTTATGCAAGGTTTGATTGACGAGCATCGGAGAAGGAAGGAAGACGGTAGAAACACCATGATCGATCATCTTCTATCTCTTCAAACGTCCGAACCTGAGTACTACAGCGACCAAATTATTAAAGGCTTTGTCCAGGACATTTTTTTTGGTGGGACTGATACAACCTCGATTACTCTAGAGTGGGCCATGAGTAATTTACTAAATAACCCAGATGTAATGGAAAAAGCTAGAGCCGAGTTGGACTGCCAAGTTGGTGAACGACTAGTTAACGAACTTGATCTTCCAAATCTGCCATACCTCGGTGGAGTCATTTCAGAGACCCTCCGACTTTACCCACCGGCAGCCCTCCATATGCCTCATTTCTCCTCCGACGATGGCACAATAGGAGGCTACGATCTGCCACGTGGAACAATGGTACTTGTCAATGTATGGGCCATGCATAGGGACCCCGAATTATGGGACGAGCCGACGACGTTTAAGCCGGATAGATATGAAGATGAGATGGGAGATGGAATGGCGTATAAGCTTTTACCGTTTGGTTTGGGGAGGAGAGCCTGTCCTGGATCTGGAATGGCGCGACGGGTATTAGGGTTAGCTTTGGGGTCGATGATCCAGTGTTTTGAATGGAAGAGAGTTGGTGAAGAAGAAGTTGACATGGCTCATGGTACAAATGTCTTCTTGCGCAGGTGCACGCCATTGGAGGCCATGTGTAAATCACGCCCTATCATCAATAAGCTTTTTTCCTGA 1497 47.96 MAESFSYAVLSLVFLLLAFKLLLTNRRKRNLPPGPTSLPIIGHLHLLKQPLHRTFKAFAEKYGHVISLKFGSQHVVIVSSPAAVQECFTKNDVILANRPKSLAGKHIAYNYTTMGTAPYGEHWRNLRRIGAIEIFSTSRLNAFSEIRKDEVERLLRKLSVNSHNEFSKVELQSLFTKLTFNIVMRMTAGKRYYGDDVADEEEASRFRDIMNQVTSLLQSGHPAEVFPILKRVDLTGYGRKLKKIGKRKDEFMQGLIDEHRRRKEDGRNTMIDHLLSLQTSEPEYYSDQIIKGFVQDIFFGGTDTTSITLEWAMSNLLNNPDVMEKARAELDCQVGERLVNELDLPNLPYLGGVISETLRLYPPAALHMPHFSSDDGTIGGYDLPRGTMVLVNVWAMHRDPELWDEPTTFKPDRYEDEMGDGMAYKLLPFGLGRRACPGSGMARRVLGLALGSMIQCFEWKRVGEEEVDMAHGTNVFLRRCTPLEAMCKSRPIINKLFS 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7142866 7145221 - Bda018550.1 Bda04g00197 5219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00197 498 SUPERFAMILY Cytochrome P450 32 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Bda04g00197 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 494 - -
Bda04g00197 498 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00197 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 494 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00197 Bda-Chr4:7142866 Bda14g01260 Bda-Chr14:13246783 0 dispersed
Bda14g01261 Bda-Chr14:13250273 Bda04g00197 Bda-Chr4:7142866 3.77E-109 dispersed
Bda01g00249 Bda-Chr1:26752037 Bda04g00197 Bda-Chr4:7142866 1.19E-44 transposed
Bda04g00360 Bda-Chr4:49746101 Bda04g00197 Bda-Chr4:7142866 0 transposed
Bda05g00895 Bda-Chr5:57378047 Bda04g00197 Bda-Chr4:7142866 3.53E-58 transposed
Bda15g00142 Bda-Chr15:3880490 Bda04g00197 Bda-Chr4:7142866 9.06E-65 transposed
Bda10g00271 Bda-Chr10:30225318 Bda04g00197 Bda-Chr4:7142866 4.26E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00197 K13260 - zju:107404429 615.92