Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00267 ATGGCTGTGGAGCTCATGATGAGTTATAGCCCTAACTCCGATTTCTCTGCAAAAATGGAGGATTCTGCCGTGCAAGAAGTAGCTTCTGGCCTTGAGAGCGTCGAAAAGCTCATTATGTTACTCTCCCGTACGCAGCAGAACCAGAGGCCGGAGAATCACTCTCACTCGCCCAGTTCCAGCTCCAGGATGCCTATGGGGGTCGAGATGGACTGTAAGGCCGTGGCCGATGTCGCCGTTTCTAAGTTTAAGAAAGTTATTTCTCTTTTGGGTCGAACCAGAGTCGGCCATGCCCGCTTCCGAAGAGCTCCATTTGAGCTTTCCAGTGCTGAAGTTCACTACGCAACTCCGATTCAGCAAATCCCTCCGGTCCCTAACCGTCAAAACAACTCCGTTGTAGTCGCTGCTTCCAAAGGCGCCGAGATTGAGCGGAAGGACTCGTTTTCCACTGTTAATTTTTCTTATTCCTCGGCTCCTAACTCCTTTATGTCGTCGTTGACCGCAGACACTGACGGCAAACAGCCGTCGCCGCCTTCTGCATTTCAGATTACGAATCTCTCTCAGGTGTCCTCCACCGGTAAACCACCTCTCTCGTCCTCATCCTTCAAGAGGAAGTGTAGTTCCGACAACCTCGGCTCCGGGTCCGCTAAGTGCGCGGGCTCCTCGGGCCGCTGCCACTGTTCGAAGAAAAGAAAACTGAGATTAAAGAGGATCGTGAGGGTTAGAGCGATCAGCTTGAAGATGGCTGATATTCCACCGGACGATTACTCTTGGAGAAAATACGGACAGAAACCCATCAAAGGATCTCCACATCCAAGGGGGTACTACAAGTGCAGCAGCGTGAGAGGTTGTCCGGCTAGAAAACACGTAGAGAGAGCTTTGGATGATCCGGCAATGTTGGTCGTCGCTTACGAAGGAGAACACAACCATCCTCTCTCTGTTGCAGAGCCCTCCGCTCTCATTCTCGAGTCCTCATAG 975 51.79 MAVELMMSYSPNSDFSAKMEDSAVQEVASGLESVEKLIMLLSRTQQNQRPENHSHSPSSSSRMPMGVEMDCKAVADVAVSKFKKVISLLGRTRVGHARFRRAPFELSSAEVHYATPIQQIPPVPNRQNNSVVVAASKGAEIERKDSFSTVNFSYSSAPNSFMSSLTADTDGKQPSPPSAFQITNLSQVSSTGKPPLSSSSFKRKCSSDNLGSGSAKCAGSSGRCHCSKKRKLRLKRIVRVRAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVAYEGEHNHPLSVAEPSALILESS 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32616742 32617924 - Bda019003.1 Bda04g00267 5289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00267 324 Pfam WRKY DNA -binding domain 253 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda04g00267 324 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda04g00267 324 MobiDBLite consensus disorder prediction 43 63 - -
Bda04g00267 324 MobiDBLite consensus disorder prediction 165 204 - -
Bda04g00267 324 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda04g00267 324 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 14 324 - -
Bda04g00267 324 SUPERFAMILY WRKY DNA-binding domain 248 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda04g00267 324 Gene3D WRKY domain 236 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda04g00267 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 324 IPR044810 GO:0003700
Bda04g00267 324 MobiDBLite consensus disorder prediction 43 65 - -
Bda04g00267 324 Pfam Plant zinc cluster domain 202 249 IPR018872 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00267 Bda11g01840 CCT
Bda04g00267 Bda11g01840 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01890 Bda-Chr1:55054785 Bda04g00267 Bda-Chr4:32616742 1.85E-74 dispersed
Bda03g00035 Bda-Chr3:499383 Bda04g00267 Bda-Chr4:32616742 1.10E-57 dispersed
Bda03g00205 Bda-Chr3:1615820 Bda04g00267 Bda-Chr4:32616742 1.78E-74 dispersed
Bda04g00267 Bda-Chr4:32616742 Bda04g00526 Bda-Chr4:53886332 1.11E-59 dispersed
Bda04g00267 Bda-Chr4:32616742 Bda01g00700 Bda-Chr1:34258875 1.27E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15797 PF03106 WRKY 1.50E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00267 - - tcc:18611185 443.351