Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00294 ATGGGGTGGTTATCTAACATTTCTTTTTCTTCTGCGAATTCCTCGCCGGTAGTTCGATCTTCTGGAAGTGGGGGTGACTCTCCGAGGAGGAGAAGGAGCAGCAGCAGTAGTGATGATCATAATTACAGAGGCGCCTGGCGGTTTGGAACCTCCAAGTATGGGCGCGGGAGGAAGTTTCGGAATCTGAGCGACAGGGACTGTCATAGTGGTTCTTCGTCCAAGTGGTCGGACTCGCCCGCCGATTCGTCCTCAGATACCTTGTCTGTGATCCAGTCTTCGAGTAGCTGTAATCAAGCTGTGCCGCTCCCGCTCCCGGAGTGTTCTGGGGTTTGCCGGCGTACCGATGGGCTGTTGAATTCAAGTTCTGGCGATGCTGACTGCCCGCTTCCTTCGCCCAAGGCTGGCCTTATCAAAGGCGTGGACGAGCGGGATAGATGCAGAGAGAAAGCAACATGTAAAATTGGGGATGAAGATCTGTCCGACTTTGGTATTAAAAGCGTGTTTGATTGTCGGAAGAGGCAAACGAAGAAGGATCGTGATGAAATGAGGTCATCTAGGACGGTTCATCAACAGCTGAATGGTTTTTCGGAGACTCGAGACAATTTCAGGGTTGATGTTCCCATAAGGAGCGCTCCAACTAGTCCCTTCTCGAGTCCTATTATCAGTCCCCAAAGAACAAGTAGGAGTGGTGATTTATTTTATAAATGGGTTCCCACTGGAAATCAAGTTTGGTCTGCACCTGAGATGCCTATCTCAACAATGGTTCCAGGCTTGCCACCTCCTGCTTTCTTTGACTGCTATCCATTCAGTACTGATAACTCCCCCATTCAAAGTCCTAGAGTAAGAAGTCCTCATCGAGACCCCAGAAGCCCGACTGGAGCTACATCACCATTGCACACCAAAAGGTCTCTTGAAAGCCCAAGTGGCACTGCCTCCCCAATGCATCCAAAACTATCTCTTGAAGCAACTACAGTACGTCGTGAAAGTAATAGTCCTGTAAATGTCCATCCACTACCCCTTCCTCCAGGGGCACCGCTCCCTTCACCAACTCCAGTTTCCCAAGTTACAGCTAAACCTGATACTTTATCAATTAAAAGCCAGTGGCAGAAAGGAAAGCTCATTGGGCGTGGCACATTTGGAAGTGTTTACGTAGCTAGTAACAGAAAAAATGGGTCTCTTTGTGCAATGAAGGAAGTGGAGTTATTTCCTGATGACCCAAAATCTGCAGAATCCATAAAGCAGTTAGAACAGGAAATCAAAGTTCTCAGCCAATTAAAGCATCCAAATATTGTTCAATATTATGGTAGTGAAATTGTTGACGATCGGTTTTACATATACTTAGAGTATGTTCATCCTGGTTCAATAAATAAATATGTTCGAGAGCATTGTGGAGCTATGACAGAGTCTGTTGTACAGAATTTCACTCGCCATATTCTCTCCGGATTGGCTTACTTGCACAGCACAAAGACCATACACCGTGATATTAAGGGAGCTAATTTACTTGTCGACTCTAGTGGGGTTGTCAAACTTGCAGACTTTGGGATGGCCAAACATCTTACTGGGCAAGCGGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTCATGCTGGCTGTTATGCAGAAAGATAACAATTCTGATCTTGCTCTAGCAGTTGATATATGGAGTCTGGGCTGTACTATTATTGAAATGCTGACGGGAAAACCTCCTTGGAGTGAATACGAAGGAGCTGCAGCTATGTTTAAGGTTATGAGAGATACTCCTCCCATACCTGAGTCGTTGTCACCCGAAGGCAAAGATTTCTTAAGATGCTGCTTTCAAAGAAATCCTGCAGATAGGCATTCTGCTATCATGCTTCTCGAACACCGATTTGTGAAGATTTCACTCCAGCCAGATGTCTCATCTTGTACACAAGCGCTTAGCATGACGAATTTGATGGACAAATCTCTCAGCCCAAGGGAGCAATCAAAAATTAAACTTGATCAATTGCCAATATCACCCAACTCTCAAAAAGCTAATGGGCTGACCTCTCCTGAGAGTGACTCTGCCAAGCAATCTATTCACGAAACCCCAGACTTATTGGTGACATCACGTTACTCCCCTCGATCCACCCTTGAGGCCCTTCCTAGTTTATCACCTCCAAGGGCGGTTCAGAACAAGCTGAATTCCAATCCTGCTGCTACTATTTCAAACAGTGGCAATAATTGTGCAAAGAAGAATCATATTTTGAGGTGA 2247 45.93 MGWLSNISFSSANSSPVVRSSGSGGDSPRRRRSSSSSDDHNYRGAWRFGTSKYGRGRKFRNLSDRDCHSGSSSKWSDSPADSSSDTLSVIQSSSSCNQAVPLPLPECSGVCRRTDGLLNSSSGDADCPLPSPKAGLIKGVDERDRCREKATCKIGDEDLSDFGIKSVFDCRKRQTKKDRDEMRSSRTVHQQLNGFSETRDNFRVDVPIRSAPTSPFSSPIISPQRTSRSGDLFYKWVPTGNQVWSAPEMPISTMVPGLPPPAFFDCYPFSTDNSPIQSPRVRSPHRDPRSPTGATSPLHTKRSLESPSGTASPMHPKLSLEATTVRRESNSPVNVHPLPLPPGAPLPSPTPVSQVTAKPDTLSIKSQWQKGKLIGRGTFGSVYVASNRKNGSLCAMKEVELFPDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEIVDDRFYIYLEYVHPGSINKYVREHCGAMTESVVQNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQAADLSLKGSPYWMAPELMLAVMQKDNNSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMRDTPPIPESLSPEGKDFLRCCFQRNPADRHSAIMLLEHRFVKISLQPDVSSCTQALSMTNLMDKSLSPREQSKIKLDQLPISPNSQKANGLTSPESDSAKQSIHETPDLLVTSRYSPRSTLEALPSLSPPRAVQNKLNSNPAATISNSGNNCAKKNHILR 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45825341 46036158 + Bda033565 Bda04g00294 5316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00294 748 MobiDBLite consensus disorder prediction 719 742 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 664 748 - -
Bda04g00294 748 ProSitePatterns Protein kinases ATP-binding region signature. 374 397 IPR017441 GO:0005524
Bda04g00294 748 MobiDBLite consensus disorder prediction 1 30 - -
Bda04g00294 748 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 720 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 64 89 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 289 313 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 1 48 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 335 349 - -
Bda04g00294 748 SMART serkin_6 368 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00294 748 MobiDBLite consensus disorder prediction 72 89 - -
Bda04g00294 748 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 720 - -
Bda04g00294 748 ProSiteProfiles Protein kinase domain profile. 368 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00294 748 Gene3D Transferase(Phosphotransferase) domain 1 364 666 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 665 711 - -
Bda04g00294 748 MobiDBLite consensus disorder prediction 274 356 - -
Bda04g00294 748 Pfam Protein kinase domain 369 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00294 748 SUPERFAMILY Protein kinase-like (PK-like) 352 667 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00294 Bda-Chr4:45825341 Bda07g01891 Bda-Chr7:36324652 1.13E-113 dispersed
Bda08g01320 Bda-Chr8:53032562 Bda04g00294 Bda-Chr4:45825341 1.45E-164 transposed
Bda04g00294 Bda-Chr4:45825341 Bda05g00241 Bda-Chr5:41124291 3.90E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69589 PF00069 Pkinase 1.20E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00294 - - cmo:103484760 786.178