Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00307 ATGTGGATTTTTTTGCCATTGAAGAGGTTAGAGGCTCCATTCAGGCCTACCATGTTTCGTCCGCTTATAATTACAATTTTTATAGTCTCTGCAACTGCCGTTGAATGCACAAATTCAACGAGCTGCAATAGCGGAAAATCAGCAATACCTGTTCCCTATCCGTTTGGATTCGCACAATCGGACTTAATCCGATTAAATTGCACGAATGGAGATATTAAGATCGGGGAATTTGTCGTGCGGAGCTTTTCCGCAGATAGTATTCTCGTAAATGTTCCTGCACTATGCAACCGTTCAACCCAGTCAGTTTCATCTCTTTTTGGGAAGAACTTTTGGCCAACAAATCGCAACAGTCTTCTTCTCCAGGGTTGCAATCCCCCTGGAAGTTGCCCGTTAGCTACAAATCTCTTACCCGACCAAATTCTGTCGGCCAACTGCGATGCGAAGAACCATAATTTGACCTGCTTCTTTCAGAATATTACAGGAAGAGGTTTCCTTATCTCGGAATGGAACAAGAATCAGTGCCACTTGCTCTACTCATCAATTATCATCAATTCAGAGTTGAACTCAACAGTTTCACTCGCCTTTCAGGCCATGGAATTACAGTGGTGGCTCGAAGGAACCTGCAAATGTTCAAATAACGCAATTCTTTCTGACATTTCACTTCCAACTGGGAATTTCGGTTGCCGGTGCAATTGCCGAGCAGGGTATGAAGGAGACGGCTATGCCGACGGCAATGGTTGCCGGAGGATAGATTCTGGATGCAATGCTCAGGGGACGTCTGAAGAATGTAGAGGAAAAATTAACGTTGGGACTCTAGTTGGAGGTATAACGGCTGGTGCTTTTCTAGTAGCTGGTCTTGCCCTCGTTTGTTATTTGATACGCCGGCGGGTTTCTTGTATGAAAAATCAAATGAGTGCAAAGCGACTTGTGTCTGAAGCAGCTCGGAACTCCACTGTTCCCTTTTACTCCTTCAAGGAAATAGAACGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTAGGAACTGGAGCCTTTGGCACTGTTTATGCGGGAAAAATTTTTAATGACCACTGGGTTGCCATAAAGAGAATCAAATACAGAGACCATAATAGTATTGACCAAGTCATGAATGAGATTCGGCTTCTTTCGTCAGTGAGCCACCCCAATCTAGTCCGCCTCTTAGGCTGCTGCATTGAGGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCTAATGGAACTTTATCTCAGCACCTTCAAAGAGAGAAAGGAAGCGTGCTTCCATGGACAACTCGCCTCACCATCGCTGCCGAAACTGCTCGTGCAATAGCATATCTTCATTCTGCCATGCACCCTCCGATTTATCACAGAGACATTAAATCCAGCAACATTCTTTTGGACTATAACTTCAAATCAAAGGTTGCTGATTTTGGTCTTTCTAGACTTGGCATTACTGAATCATCACACATCTCTACAGCCCCTCAAGGAACTCCAGGCTATCTTGATCCCCAGTACCATCAGAATTTTCATCTTTCGGATAAAAGTGATGTTTACAGTTTTGGAGTTGTTCTTTTAGAGATCATTACTGCCATGAAAGTGGTTGATTTTACTCGGCCTCAAGGCGATGTGACATTAGCTGCACTTGCCATCGATCGGATTGGCCGAGGTTGTGTGGATGAATTAATAGACCCATTCCTCGAGCCGAACAGGGATGCCTGGACACTTTATTCTGTCCACAAGGTGGCTGAACTTGCATTTCGATGCTTGGCTTTCCACAGTGAAACAAGGCCGACTATGATGGAAGTGGCGGAGGAGCTCGAAACGATCAGGCACAGTGGGTGGGCAACACTGGAAGAAACTATATGCGTAGCATCGTCACTAGGATCCACAAGTTCATCGCCACGTAATGGAAGTGAAAAATCAATGAGTGGATCGATGGTTAAGAGGGCAGGATTAGGGGGTCAGATCTTGATCGTCCCACCGCAAAACTACAATGGCGATTTCTCTGGGGCTTCGATGGAAGAGGTTACAGATAGCTCTCCTGTTTCTGTACAAGATCCTTGGTTCAGTGAGCAAAGCTCACCTTCGACAAATAGTTTGTTGGGTAATGTGATTCATTGA 2121 45.03 MWIFLPLKRLEAPFRPTMFRPLIITIFIVSATAVECTNSTSCNSGKSAIPVPYPFGFAQSDLIRLNCTNGDIKIGEFVVRSFSADSILVNVPALCNRSTQSVSSLFGKNFWPTNRNSLLLQGCNPPGSCPLATNLLPDQILSANCDAKNHNLTCFFQNITGRGFLISEWNKNQCHLLYSSIIINSELNSTVSLAFQAMELQWWLEGTCKCSNNAILSDISLPTGNFGCRCNCRAGYEGDGYADGNGCRRIDSGCNAQGTSEECRGKINVGTLVGGITAGAFLVAGLALVCYLIRRRVSCMKNQMSAKRLVSEAARNSTVPFYSFKEIERATNGFSEKQRLGTGAFGTVYAGKIFNDHWVAIKRIKYRDHNSIDQVMNEIRLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQREKGSVLPWTTRLTIAAETARAIAYLHSAMHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGITESSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLLEIITAMKVVDFTRPQGDVTLAALAIDRIGRGCVDELIDPFLEPNRDAWTLYSVHKVAELAFRCLAFHSETRPTMMEVAEELETIRHSGWATLEETICVASSLGSTSSSPRNGSEKSMSGSMVKRAGLGGQILIVPPQNYNGDFSGASMEEVTDSSPVSVQDPWFSEQSSPSTNSLLGNVIH 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46531151 46535180 + Bda019177.1 Bda04g00307 5329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00307 706 SMART serkin_6 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00307 706 MobiDBLite consensus disorder prediction 680 706 - -
Bda04g00307 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Bda04g00307 706 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 643 IPR045274 GO:0007166
Bda04g00307 706 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Bda04g00307 706 SUPERFAMILY Protein kinase-like (PK-like) 313 608 IPR011009 -
Bda04g00307 706 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00307 706 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Bda04g00307 706 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 31 643 - -
Bda04g00307 706 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Bda04g00307 706 Pfam Protein tyrosine and serine/threonine kinase 337 606 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00373 Bda-Chr1:29593819 Bda04g00307 Bda-Chr4:46531151 1.47E-91 dispersed
Bda01g01485 Bda-Chr1:50750990 Bda04g00307 Bda-Chr4:46531151 2.20E-63 dispersed
Bda04g00307 Bda-Chr4:46531151 Bda12g00242 Bda-Chr12:2535204 5.68E-85 dispersed
Bda14g00376 Bda-Chr14:2728868 Bda04g00307 Bda-Chr4:46531151 1.86E-67 dispersed
Bda04g00307 Bda-Chr4:46531151 Bda15g00339 Bda-Chr15:6253955 1.70E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69590 PF07714 PK_Tyr_Ser-Thr 1.20E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00307 - - pmum:103340007 842.032