Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00317 ATGTTGATCATGGGGATCTTTGTTTTTTTGAAAAGATTCCAGAAAAGAAAGAAGAAAACAGATTCAGCGATCGATTCTGACATCTTTGAGCCGAATGAGAAGCCTTTGCAGAAAAAGGAGGAGGGGGATAGCGAATCTCTTGAGTTCTTGGAGAGCATAGCCAGTGTAGCTCAATCCCTCAAAGTGTACAGCTTTAAGGAGCTTCAATATGCAACTGATGATTTCGGTCCAGCAAATTGGATCAAAGGGTCTGTTTATCGCGGGACGATCAATGGTGATTTAGCAGCTATTAAAAAAATGGAGGGGGACGTATCGAAAGAAATCAACCTTCTGAACAAAGTGAACCACTCGAATCTCATCCGCCTTTCGGGCGTTTGTTTCAACGAGGGCCATTGGTATCTCATCTACGAATACGCCACAAACGGCCCCTTGAGCGAATGGATCCACTCCAACAATGGAGACTCCAAGTTTTTGAATTGGATTCAGCGAATTCAAATCGCGTTGGACGTGGCCACGGGGCTCGACTATCTCCATAGCTTCATGAATCCTCCTCATGTCCACAAGGATATAAAAAGTAGTAACATTCTTCTCGACGCCGAATTCAGAGCTAAAATAGCAAACTTTGGCCTTGCAAGATCCGGTGAGTCGCAGGAAGGCGAATTCGCATTAACTCGGCACATTGTCGGAACCAGAGGCTACATGGCTCCAGAGTATGTCGAAAATGGTTTGATCTCTTCTAAACTCGATGTGTATTCATTTGGAATTCTGATGCTGGAAATTCTGACCGGGAAAGAGGTTTCCGAACTGTACGGGGAGGAGAATGCAATCGTTTGGGATGTAGTAAACGGCAAGCTGAGCTCGGAAGCTCAGCGGGAAAGTTTAAGGCGCATTATGGATCCTTCAATGCAAGGGTTGTATCCTCTAGAACTTGCAGTTTTTGTGATGAGTTTGATTAGTAGTTGCTTGAAGAAAGATCCGGCTGATAGGTTGTCCATGGATGAGATTGTGCAGTCCCTCTCAAGAACCTTGAGCGGCTCGCTGTCCTGGGAGTCATCTCAAAGCATTTCAAAGTAG 1074 45.16 MLIMGIFVFLKRFQKRKKKTDSAIDSDIFEPNEKPLQKKEEGDSESLEFLESIASVAQSLKVYSFKELQYATDDFGPANWIKGSVYRGTINGDLAAIKKMEGDVSKEINLLNKVNHSNLIRLSGVCFNEGHWYLIYEYATNGPLSEWIHSNNGDSKFLNWIQRIQIALDVATGLDYLHSFMNPPHVHKDIKSSNILLDAEFRAKIANFGLARSGESQEGEFALTRHIVGTRGYMAPEYVENGLISSKLDVYSFGILMLEILTGKEVSELYGEENAIVWDVVNGKLSSEAQRESLRRIMDPSMQGLYPLELAVFVMSLISSCLKKDPADRLSMDEIVQSLSRTLSGSLSWESSQSISK 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 47007325 47008398 - Bda019194.1 Bda04g00317 5339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00317 357 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Bda04g00317 357 SMART serkin_6 80 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00317 357 SUPERFAMILY Protein kinase-like (PK-like) 56 339 IPR011009 -
Bda04g00317 357 ProSiteProfiles Protein kinase domain profile. 1 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00317 357 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 2 354 - -
Bda04g00317 357 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 354 - -
Bda04g00317 357 Pfam Protein kinase domain 98 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00317 357 Gene3D Transferase(Phosphotransferase) domain 1 140 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00317 Bda-Chr4:47007325 Bda11g00607 Bda-Chr11:6171112 2.18E-74 dispersed
Bda14g01210 Bda-Chr14:12070710 Bda04g00317 Bda-Chr4:47007325 1.10E-54 dispersed
Bda04g00317 Bda-Chr4:47007325 Bda06g00378 Bda-Chr6:5968442 1.27E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69591 PF00069 Pkinase 6.70E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00317 - - jre:108995327 471.47