Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00335 | ATGGTATTTTCTGGTTCGGAAGAAGACGGTGCTTGCCCTGCAGAGCCTCCGGATCCCGACATTGTAGAATTTGACCCAACTTGCCGCTATATTAGGTACAAAGATGTGCTTGGGAAAGGTGCTTTCAAGACAGTATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATTGATGAGGTTCTACAGTCTCCAGATGACTTAGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCCTTGAAGCATAACAACGTTGTGAGATTTTACAATTCATGGATCGATGATAAGAACAAGACCGTTAATATTATTACTGAGTTGTTCACATCCGGAAGCCTCAGACAATATTGTAAGAAACACAAAATGGTTGATATGAAGGCAGTGAAGGGATGGGCAAGACAGATTCTGATGGGTTTGAACTACCTCCACGGTCATAATCCACCAATTATACATAGGGACCTGAAGTGCGATAACATATTTATCAACGGTAATCAAGGAGAAGTAAAGATTGGTGATCTTGGGTTGGCAACTATTATGCAGCACGGAACTGCTAAAAGTGTAATTGGCACACCTGAGTTTATGGCTCCTGAACTTTATGATGAAAATTACAATGAGTTGGCTGATATTTATTCTTTTGGGATGTGCATGCTGGAGATGGTGACTTTTGAATACCCTTACAGTGAGTGCAGAAACTCGGCTCAAATATACAAGAAGGTTACTTCTGGTATAAAGCCTGCTGCTCTCTCTAAAGTGAAAGATCAAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCATCAGAAAGATCTTCTGCGAAGGAACTTCTGATGGATCCTTTTCTTCAAGCTAATGGATCAGCAAAATTTCGTCCTCTGCCACTCCCAGATATCGTTCTTCCCAAATTTGGAACCTTTGGAGACCGTTGTCTTATGTCGGAAGGACCTGCGACTTCACAAAATGCACCAACTTCCATGGATGTAAATAACGAGGGCGAGCCACCTATCATTACTTCTTTTGACACTTCAGTTGATGGGGATTCCCATTCGCTGTCTGTGGAGGTTAAAAGGACAAAGAGGGGCAATGTCTTCTTGTTGAAAGGGGAACGAAACGACGAGAACTCTATCTCTCTGATACTTCAGATAGCCGATCAAAATGGTCGAGCTCGAAATATCCATTTTATATTCTACCTCGACAGTGACACAGCTCTCTCTCTTTCAAGTGAAATGGTGGAACAGCTAGAACTGCCAGACCAAAATGTTATGCTCGTAGCAGAATTGATTGATTTGCTGCTAGTAAACATAATTCCCAGTTGGGAACCTTGTGTTCGCGTAGAGCATTTGGTCGCTGCAAATAGAATAAGAGCTTCGAAAGGCAATGGAAAAGATTTTTCATCTCAAAAACAAAAGGATGAAAACGCTTTGTTATCGAAGGCACATGAGCCTGGAAATCTTTCATCCTCGCTAGTCCTCCTCAATTCTTCCTCGTCGGATGCATTAAGTCAAGCAATGCCAGAAAAGTCGGAGAATCCGAAATCCGATCTTATTAGATCTCATTCGTACGGTTGCTTACGGGGCGAAACAAGTGCAGATGATAGATTTTCCGAAATGTCTTATGTTTCTGCAACCTCTAATGAGTGCAGCGAGAGGAATTGGTCAGTCGATTCATTCATGTCATTTGAATCTGGATTGATGGATTCCAATCGATGCGGATCACAAAGAGGTTCAGGGGTCATAACTCCATATTTGACCGATATGGTTGGATTGCCCGAAATCAAGAACGCGGTATTGGAAATTGGAAGGAACAGCTTGCTTTCCTCCCGTGATTTTCCGAATGACGGCTCGTGCTTGTCCGATCAGGTGGAAGAGGAGATGAGAACTGAGTTGGAGATAATTGAATTGCAGTTCCAGGAGGCAATGAGGGAGTTGTGCAAGAAAAGACACGAAGCCATCATGGAGGCAAGAAAAAGGTTATATAAGAAAAATATAGAGACGTTTTCTTAG | 2022 | 42.04 | MVFSGSEEDGACPAEPPDPDIVEFDPTCRYIRYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNVVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKMVDMKAVKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMQHGTAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDQDMKQFIEKCLVPASERSSAKELLMDPFLQANGSAKFRPLPLPDIVLPKFGTFGDRCLMSEGPATSQNAPTSMDVNNEGEPPIITSFDTSVDGDSHSLSVEVKRTKRGNVFLLKGERNDENSISLILQIADQNGRARNIHFIFYLDSDTALSLSSEMVEQLELPDQNVMLVAELIDLLLVNIIPSWEPCVRVEHLVAANRIRASKGNGKDFSSQKQKDENALLSKAHEPGNLSSSLVLLNSSSSDALSQAMPEKSENPKSDLIRSHSYGCLRGETSADDRFSEMSYVSATSNECSERNWSVDSFMSFESGLMDSNRCGSQRGSGVITPYLTDMVGLPEIKNAVLEIGRNSLLSSRDFPNDGSCLSDQVEEEMRTELEIIELQFQEAMRELCKKRHEAIMEARKRLYKKNIETFS | 673 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 48341510 | 48344510 | - | Bda019232.1 | Bda04g00335 | 5357 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00335 | 673 | Gene3D | Transferase(Phosphotransferase) domain 1 | 114 | 296 | - | - | |
Bda04g00335 | 673 | ProSiteProfiles | Protein kinase domain profile. | 31 | 288 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00335 | 673 | CDD | STKc_WNK | 29 | 288 | - | - | |
Bda04g00335 | 673 | Coils | Coil | 628 | 648 | - | - | |
Bda04g00335 | 673 | SMART | serkin_6 | 31 | 288 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00335 | 673 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED | 4 | 670 | - | - | |
Bda04g00335 | 673 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 155 | 167 | IPR008271 | GO:0004672|GO:0006468 | |
Bda04g00335 | 673 | Pfam | Protein kinase domain | 34 | 288 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00335 | 673 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 4 | 670 | - | - | |
Bda04g00335 | 673 | SUPERFAMILY | Protein kinase-like (PK-like) | 33 | 346 | IPR011009 | - | |
Bda04g00335 | 673 | Gene3D | Phosphorylase Kinase; domain 1 | 16 | 112 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda04g00335 | Bda10g00352 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00335 | Bda-Chr4:48341510 | Bda10g00352 | Bda-Chr10:34257425 | 0 | dispersed | |
Bda10g00353 | Bda-Chr10:34281854 | Bda04g00335 | Bda-Chr4:48341510 | 1.03E-114 | dispersed | |
Bda13g00394 | Bda-Chr13:4937672 | Bda04g00335 | Bda-Chr4:48341510 | 2.80E-21 | dispersed | |
Bda04g00335 | Bda-Chr4:48341510 | Bda04g00336 | Bda-Chr4:48369600 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69592 | PF00069 | Pkinase | 2.50E-53 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00335 | K08867 | - | vvi:100259251 | 835.484 |