Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00336 ATGTTATTTTCTGGTTCGGAAGAAGACGGTGCTTGCCCTGCAGAGCCTCCGGATCCCGACATTGTAGAATTTGACCCAACTTGCCGCTATATTAGGTACAAAGATGTGCTTGGGAAAGGTGCTTTCAAGACAGTATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATTGATGAGGTTCTACAGTCTCCAGATGACTTAGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCCTTGAAGCATAACAACGTTGTGAGATTTTACAATTCATGGATCGATGATAAGAACAAGACCGTTAATATTATTACTGAGTTGTTCACATCCGGAAGCCTCAGACAATATTGTAAGAAACACAAAATGGTTGATATGAAGGCAGTGAAGGGATGGGCAAGACAGATTCTGATGGGTTTGAACTACCTCCACGGTCATAATCCACCAATTATACATAGGGACCTGAAGTGCGATAACATATTTATCAACGGTAATCAAGGAGAAGTAAAGATTGGTGATCTTGGGTTGGCAACTATTATGCAGCACGGAACTGCTAAAAGTGTAATTGGCACACCTGAGTTTATGGCTCCTGAACTTTATGATGAAAATTACAATGAGTTGGCTGATATTTATTCTTTTGGGATGTGCATGCTGGAGATGGTGACTTTTGAATACCCTTACAGTGAGTGCAGAAACTCGGCTCAAATATACAAGAAGGTTACTTCTGGTATAAAGCCTGCTGCTCTCTCTAAAGTGAAAGATCAAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCATCAGAAAGATCTTCTGCGAAGGAACTTCTCATGGATCCTTTTCTTCAAGCTAATGGATCAGCAAAATTTCGTCCTCTGCCACTCCCAGATATCGTTCTTCCCAAATTTGGAACCTTTGGAGACCGTTGTCTTATGTCGGAAGGACCTACGACTTCACGAAATGCACCAACTTCCATGGATGTAAATAACGAGGGCGAGCCACCTATCATTACTTCTTTTGACACTTCAGTTGATGGGGATTCCCATTCGCTGTTTGTGGAGGTTAAAAGGACAAAGAGGGGCAATGTCTTCTTGTTGAAAGGGGAACGAAACGACGAGAACTCTATCTCTCTGATACTTCAGATAGCCGATCAAAATGGTCGAGCTCGAAATATCCATTTTATATTCTACCTCGACAGTGACACAGCTCTCTCTCTTTCAAGTGAAATGGTGGAACAGCTAGAACTGCCAGACCAAAATGTTATGCTCGTAGCAGAATTGATTGATTTGCTGCTAGTAAACATAATTCCCAGTTGGGAACCTTGTGTTCGCGTAGAGCATTTGGTCGCTGCAAATAGAATAAGAGCTTCGAAAGGCAATGGAAAAGATTTTTCATCGCAAAAACAAAAGGATGAAAACGCTTTGTTATCGAAGGCACATGAGCCTGGAAATCCTTCATCCTCGCTAGTCCTCCTCAATTCTTCCTCGTCGGATGCATTAAGTCAAGCAATGCCAGAAAAGTCGGAGAATCCGAAATCCGATCTTATTAGATCTCATTCGTACGGTTGCTTACGGGGCGAAACAAGTGCAGATGATAGATTTTCCGAAATGTCTTATGTTTCTGCAACCTCTAATGAGTGCAGCGAGAGGAATTGGTCAGTCGATTCATTCATGTCATTTGAATCTGGATTGATGGATTCCAATCGATGCGGATCACAAAGAGGTTCAGGGGTCATAACTCCATATTTGACCGATATGGTTGGATTGCCCGAAATCAAGAACGCGGTATTGGAAATTGGAAGGAACAGCTTGCTTTCCTCCCGTGATTTTCCGAATGATGGCTCGTGCTTGTCCGATCAGGTGGAAGAGGAGATGAGAACTGAGTTGGAGATAATTGAATTGCAGTTCCAGGAGGCAATGAGGGAGTTGTGCAAGAAAAGACACGAAGCCATCATGGAGGCAAGAAAAAGGTTATGTAAGAAAAATATAGAGACGTTTTCTTAG 2022 42.04 MLFSGSEEDGACPAEPPDPDIVEFDPTCRYIRYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNVVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKMVDMKAVKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMQHGTAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDQDMKQFIEKCLVPASERSSAKELLMDPFLQANGSAKFRPLPLPDIVLPKFGTFGDRCLMSEGPTTSRNAPTSMDVNNEGEPPIITSFDTSVDGDSHSLFVEVKRTKRGNVFLLKGERNDENSISLILQIADQNGRARNIHFIFYLDSDTALSLSSEMVEQLELPDQNVMLVAELIDLLLVNIIPSWEPCVRVEHLVAANRIRASKGNGKDFSSQKQKDENALLSKAHEPGNPSSSLVLLNSSSSDALSQAMPEKSENPKSDLIRSHSYGCLRGETSADDRFSEMSYVSATSNECSERNWSVDSFMSFESGLMDSNRCGSQRGSGVITPYLTDMVGLPEIKNAVLEIGRNSLLSSRDFPNDGSCLSDQVEEEMRTELEIIELQFQEAMRELCKKRHEAIMEARKRLCKKNIETFS 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48369600 48372577 - Bda019233.1 Bda04g00336 5358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00336 673 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Bda04g00336 673 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00336 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 670 - -
Bda04g00336 673 CDD STKc_WNK 29 288 - -
Bda04g00336 673 Coils Coil 628 648 - -
Bda04g00336 673 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00336 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bda04g00336 673 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00336 673 SUPERFAMILY Protein kinase-like (PK-like) 33 345 IPR011009 -
Bda04g00336 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 670 - -
Bda04g00336 673 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00336 Bda-Chr4:48369600 Bda10g00352 Bda-Chr10:34257425 0 dispersed
Bda04g00335 Bda-Chr4:48341510 Bda04g00336 Bda-Chr4:48369600 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69593 PF00069 Pkinase 2.50E-53 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00336 K08867 - vvi:100259251 836.639