Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda04g00343 | ATGAATTCAAAAAACCCTTACTGGGCATTGATCTTGATACAAGTTTCAGTTGCTGGAATGATCCTGCTCTCCAAAGCTGCTTTTGCAGGAGGCATGAGTCCTTGCGTGTTCGTCTTCTACAGACAAGCTGCTGGAACCATTATCTTAATCCCACTCACCCTGTATTATGAAAGAAAAGGACTATCTCCTCTTACTTTTGTGTTCTTTTGCAAGATTTCAATGTTTTCCTTTATTGGGCATACTTTTGCACTAAATGCTTCCGGGGCTGCAATCGATTTTACGTCCGCAACTTTGGGGGCTGCTTTCTATAATGGCATTCCTGTTACCACCTTCTTCTTTGCCTTTTTATTTGGATTGGAGAAGGTTAATCTGAAAGTTCTTCCAGGAATGGCAAAGGTGGCAGGCATTGTTCTGTGCTTAGTAGGAGTAATGATACTCACTTTTTACAGTGGCCCACATTTTAAACCATTCTTCCATACTAACTTTCTCCAATTCGGCAACCTCTCTGCTCAACAACTTCATCATCGACCTCATTATTCTTTCCGAAGATGGATCCTTGGTTGTTTCCTTCTCTTCCTCTCCAGCATTTCTTGGGGCCTCTGGCTTGTTCTTCAGGCGCGGTTTCTGAAAACATATCCATTTCCGCTTGCATTCACCTCTTTCCAAACTTTGTCAAGTGCAGTTCAAACATTTTTCGTCGCCATTGCCATCGAAAGAGACCCAGCTCAGTGGAAACTGGGTTTCGATGTTAGATTACTTGCTGTGGTTTACTGTGGCTTTTTCGTCACATTCTTCGCAAATTCGTTGCAAAGCTGGGTGATGAAAAAGAATGGCCCTGTTTTCCTGGCTATGTCAACGCCAATGAATTTGGTCGTCACCACGGCTGGCTCTTTACTCCTTTTGAACGAGAGCATTAGCCTGGGAAGTGTTTTAGGGGGAGTTGTGTTGGTGGTGAGCCTTTACAGTGTGTTGTGGGCGAAAAGCAAGGAGCCAAGCGTTGAAGCTGCAGCAGAAAATGAGGAGAAAAGTCATGCAGAATCGAAGGCGGTGGATCGCGTCTAG | 1062 | 44.35 | MNSKNPYWALILIQVSVAGMILLSKAAFAGGMSPCVFVFYRQAAGTIILIPLTLYYERKGLSPLTFVFFCKISMFSFIGHTFALNASGAAIDFTSATLGAAFYNGIPVTTFFFAFLFGLEKVNLKVLPGMAKVAGIVLCLVGVMILTFYSGPHFKPFFHTNFLQFGNLSAQQLHHRPHYSFRRWILGCFLLFLSSISWGLWLVLQARFLKTYPFPLAFTSFQTLSSAVQTFFVAIAIERDPAQWKLGFDVRLLAVVYCGFFVTFFANSLQSWVMKKNGPVFLAMSTPMNLVVTTAGSLLLLNESISLGSVLGGVVLVVSLYSVLWAKSKEPSVEAAAENEEKSHAESKAVDRV | 353 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 48658751 | 48660737 | - | Bda019249.1 | Bda04g00343 | 5365 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda04g00343 | 353 | PANTHER | WAT1-RELATED PROTEIN | 5 | 338 | IPR030184 | GO:0016021|GO:0022857 | |
| Bda04g00343 | 353 | MobiDBLite | consensus disorder prediction | 333 | 353 | - | - | |
| Bda04g00343 | 353 | Pfam | EamA-like transporter family | 186 | 324 | IPR000620 | GO:0016020|GO:0016021 | |
| Bda04g00343 | 353 | Pfam | EamA-like transporter family | 7 | 147 | IPR000620 | GO:0016020|GO:0016021 | |
| Bda04g00343 | 353 | PANTHER | WAT1-RELATED PROTEIN | 5 | 338 | - | - | |
| Bda04g00343 | 353 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 253 | 329 | - | - | |
| Bda04g00343 | 353 | MobiDBLite | consensus disorder prediction | 332 | 353 | - | - | |
| Bda04g00343 | 353 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 40 | 151 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda04g00343 | Bda10g00347 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda04g00343 | Bda-Chr4:48658751 | Bda10g00361 | Bda-Chr10:34564386 | 1.12E-151 | dispersed | |
| Bda10g00347 | Bda-Chr10:34097858 | Bda04g00343 | Bda-Chr4:48658751 | 1.63E-96 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda04g00343 | - | - | csv:101219744 | 365.155 |