Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00364 CTCTTAATGGCAAAAACAATGAAACCCTCTTCCACCTATCCTCACTTCTCTGTCCTCCTCCTCCTCGCTTTTATCTCTCTAAAAGCTTCATCGTCGCCTTCTAGAGATGCCCAGCAGCTGATCAACTTCAAAGCTTCAGTTCCCGACCCTTCTCTGCTTCAAAACTGGCTCTCCAATGGCGACCCCTGTTCTTTTTCTCACATTACCTGCAAAGAATCCAGAGTTTCCGCCATAGACCTGAGCTTCATCCCCATAAGCTCAAATTTCAGCTCCGTTTTCTCTTTTCTTTTCGCACTCGACTTCTTAGAATCCATCTCGCTGAAATCCACTAATCTTACCGGCGCCATTTTGGTATCTTCTGGATCCAAGTGCAGCTCTTTGTTGAGTGCCGTAGATCTATCTCAGAACAGCTTGTCTGGCCCCATTTCAGACGCTTCTAACTTGGGTTCTTGCTCAAATTTGAAGAGTCTAAATCTGTCGTTCAATTATTTTGATTTTTCAGTGAAGGAGGTCACCGGATTGCAGCTGGATTTGCAGGTTCTTGATTTTTCTTTCAATAAAATCGTGGGTTCGAACGTGATACCTTGGATTTTGTCCGCTGGTTGCACCGAAATGCAACACTTGGCGATAAAGGGGAACAAAATCAGCGGGGAAATTGATTTCTCTTCGTGCAAGAATTTGGAGTATTTGGACATTTCTTCCAACAATTTCTCGGCGATTATTCCTTCTTTCGGAGATTGCTCCGTTTTGGAATACCTTGACATCTCCAGCAACAAGTTTTCCGGCGACGTCGGACGAGCTCTCCCTGGTTGCAAACAGCTCAGCTTCCTTAATCTCTCCACAAACCAGCTGTCCGGTCAAATACCGGCGTTCTCTTCCCAGAACTTAAGGTTTCTCTCGCTGTCTGGCAACGATTTTCAGGGCCAGATTCCGGCCCATCTTGCCGATTCGTGCTTTGGTTTGATAGAACTAGACCTTTCGCTAAATAACTTATCCGGTGAAGTTCCTTCTGCTCTGGGTTTGTGTTCTTCTCTTCAATTTTTGGATATTTCGAGCAATAATTTGTCTGGTGAATTTCCCATTTCTATCTTCACTTCAATGGTTAGCTTGAAGGTGCTTTCTCTCTCCGACAACAAATTTTCTGGGTTGCTGCCGGATTCTCTTTCTAATCTCACTAGCTTGGAGACTTTGGATCTGAGTTCGAATAATTTCTCTGGGTCGATTCCGTCGATGCTCTGCCAGTACTCTGGCAACAACTTAAAGGAGATCTTTCTCCAGAATAATCTGTTAATGGGTTCTATTCCGGAGACTCTGAGCAACTGTTCTCAGCTCGTTTCTCTTGATTTGAGCTTCAATTTTCTCACCGGAGCTATTCCATCCAGCCTAGGCTCCCTTTCTAAGCTCCGGAATCTGATGATTTGGTTGAATCAGCTTGAAGGACAGATCCCGGAAACGCTGAAGTTCATTCCGGCGCTTGAGAATCTGATTCTTGATTTCAACTTTCTCACCGGAACTATTCCCTCCGGACTAAGCAACTGCACGAACCTGAACTGGATTTCCCTATCCAACAACCAGTTAAGTGGCGAGATCCCAGCTTGGATAGGCGGTCTTCCTAGCCTAGCCATCCTCAAACTAAGCAACAACTCATTCTCCGGCAGAATACCCCCAGAGCTCGGGGACTGCCGGAGCTTGATATGGTTGGACCTCAACACCAACTTCTTAAACGGGACGATTCCCCCGGAGCTTTTCAAGCAATCTGGCAACATTGCGGTGAACTTCATCACCGGAAAATCATATGTTTACATCAAAACGGACGGCAGCAAGGAGTGTCACGGAGCTGGAAGTTTACTGGAATTCGCGGGAATTCGTCAAGAACAAGTGAACAGAATCTCAAGCAGAAGTCCCTGCAACTTCACCAGAGTTTACAGAGGTATCACCCAGCCCACATTTAACCACAATGGATCCATGATTTTTCTTGATATTTCTCATAACATGTTATCTGGTAGTATCCCCAAAGAGATTGGCTCGACAAATTATCTTTACATTCTGAATTTGGGTCATAACAAACTGACTGGAACGATCCCTCAAGAACTTGGCAACCTCAGAAGTCTCAACATTCTTGATCTCTCGAGTAACATGCTCGAAGGGTCGATCCCGCCCTCTTTGACCAGCCTTTCCTTGCTTACAGAGATTAATTTGTCTAATAATCTCTTGAATGGAACAATCCCAGAATCGGGTCAGTTCGAAACTTTTCCGGCATCGGGTTTTCTGAACAATTCCGGCCTCTGTGGATATCCTCTTCCCAAATGTGGGGCTGATTCCGGCTCAGGCTTGGACTCCCAACATGAGAAGTCCCACCGGAAACAAGCTTCCCTTGCCGGAAGCGTGGCAATGGGCCTGTTGTTTTCACTTTTCTGCATATTTGGTTTGATCATTGTTGCCATAGAAACCAGGAAGAGAAGGAAGAAGAAGGATTCGACTCTCGATATTTACGTGGACAGCCATTCACAATCAGGCACTGCAAATACGAGCTGGAAGCTAACCAGTGCTCGAGAAGCATTAAGCATAAATCTTGCCACCTTTGAGAAACCATTACGAAAGCTCACATTTGCAGACCTTCTCGAGGCCACTAATGGCTTCCACAATGACAGCCTAGTTGGCTCTGGTGGATTTGGTGATGTTTACAAAGCGAATTTGAAGGACGGGAGCGTTGTGGCGATTAAGAAACTAATACATATAAGTGGGCAGGGGGATAGAGAATTCACAGCAGAAATGGAAACGATCGGAAAAATCAAGCACAGAAACCTCGTTCCCCTCCTCGGATATTGCAAAGTCGGAGAAGAACGGCTTCTGGTTTATGAGTACATGAAGTACGGAAGCCTCGAAGATGTTCTACACGACCAGAAAAAGGTTGGAATCAAGCTGAATTGGGGAGCGAGGAGGAAAATCGCCATTGGAGCAGCAAGAGGACTAGCTTTTCTTCACCATAATTGCACTCCCCACATAATTCACAGAGACATGAAATCGAGCAATGTTCTGCTCGACGAGAATTTAGAAGCTCGAGTCTCGGATTTTGGAATGGCAAGGCTGATGAGTACCATGGACACCCATTTGAGCGTTAGCACCCTCGCCGGAACTCCTGGCTACGTCCCACCAGAGTACTACCAGAGCTTCCGATGTTCCACGAAAGGGGACGTTTATAGCTACGGAGTCGTTCTACTCGAGCTTCTAACTGGGAAACGACCAACGGACTCCATAGATTTCGGGGATAATAATCTGGTTGGATGGGTAAAAATGCACGCCAAATTGAAAATAAGCAATGTTTTCGATCCGGAGCTCATGAAAGAGGATCCAAACCTTGAAATCGAGCTATTGCAGCATTTGAAGGTAGCCTGTGCTTGCCTGGACGACCGGCCGTGGAGGCGGCCGACCATGATTCAAGTGATGGCGATGTTTAAGGAAATTCAGGCCGGGTCGGGAATTGATTCTCAATCTACAATTTCATCGGACGGCAAAGGATTCAACGGGGTCGGCGGAGTAGAGATGAGCATAAAAGAAGGGCCAGAGCTCAACAAGCAGTAA 3582 46.15 LLMAKTMKPSSTYPHFSVLLLLAFISLKASSSPSRDAQQLINFKASVPDPSLLQNWLSNGDPCSFSHITCKESRVSAIDLSFIPISSNFSSVFSFLFALDFLESISLKSTNLTGAILVSSGSKCSSLLSAVDLSQNSLSGPISDASNLGSCSNLKSLNLSFNYFDFSVKEVTGLQLDLQVLDFSFNKIVGSNVIPWILSAGCTEMQHLAIKGNKISGEIDFSSCKNLEYLDISSNNFSAIIPSFGDCSVLEYLDISSNKFSGDVGRALPGCKQLSFLNLSTNQLSGQIPAFSSQNLRFLSLSGNDFQGQIPAHLADSCFGLIELDLSLNNLSGEVPSALGLCSSLQFLDISSNNLSGEFPISIFTSMVSLKVLSLSDNKFSGLLPDSLSNLTSLETLDLSSNNFSGSIPSMLCQYSGNNLKEIFLQNNLLMGSIPETLSNCSQLVSLDLSFNFLTGAIPSSLGSLSKLRNLMIWLNQLEGQIPETLKFIPALENLILDFNFLTGTIPSGLSNCTNLNWISLSNNQLSGEIPAWIGGLPSLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNFLNGTIPPELFKQSGNIAVNFITGKSYVYIKTDGSKECHGAGSLLEFAGIRQEQVNRISSRSPCNFTRVYRGITQPTFNHNGSMIFLDISHNMLSGSIPKEIGSTNYLYILNLGHNKLTGTIPQELGNLRSLNILDLSSNMLEGSIPPSLTSLSLLTEINLSNNLLNGTIPESGQFETFPASGFLNNSGLCGYPLPKCGADSGSGLDSQHEKSHRKQASLAGSVAMGLLFSLFCIFGLIIVAIETRKRRKKKDSTLDIYVDSHSQSGTANTSWKLTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKANLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKVGIKLNWGARRKIAIGAARGLAFLHHNCTPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSTMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSIDFGDNNLVGWVKMHAKLKISNVFDPELMKEDPNLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTISSDGKGFNGVGGVEMSIKEGPELNKQ 1193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 49930326 49933907 + Bda019291.1 Bda04g00364 5386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00364 1193 SMART serkin_6 880 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00364 1193 Gene3D Transferase(Phosphotransferase) domain 1 956 1157 - -
Bda04g00364 1193 SUPERFAMILY Protein kinase-like (PK-like) 861 1152 IPR011009 -
Bda04g00364 1193 Gene3D Phosphorylase Kinase; domain 1 840 955 - -
Bda04g00364 1193 SUPERFAMILY RNI-like 268 581 - -
Bda04g00364 1193 Pfam Protein kinase domain 880 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00364 1193 PANTHER SYSTEMIN RECEPTOR SR160 17 1167 - -
Bda04g00364 1193 SUPERFAMILY L domain-like 61 358 - -
Bda04g00364 1193 Gene3D - 592 652 - -
Bda04g00364 1193 CDD STKc_IRAK 886 1155 - -
Bda04g00364 1193 ProSiteProfiles Protein kinase domain profile. 880 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00364 1193 SMART LRR_typ_2 391 415 IPR003591 -
Bda04g00364 1193 SMART LRR_typ_2 701 725 IPR003591 -
Bda04g00364 1193 SMART LRR_typ_2 537 561 IPR003591 -
Bda04g00364 1193 SMART LRR_typ_2 224 247 IPR003591 -
Bda04g00364 1193 SMART LRR_typ_2 489 513 IPR003591 -
Bda04g00364 1193 SMART LRR_typ_2 367 390 IPR003591 -
Bda04g00364 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1002 1014 IPR008271 GO:0004672|GO:0006468
Bda04g00364 1193 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Bda04g00364 1193 Pfam Leucine Rich Repeat 444 465 IPR001611 GO:0005515
Bda04g00364 1193 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 1167 - -
Bda04g00364 1193 Pfam Brassinosteroid receptor island domain 587 651 IPR045381 -
Bda04g00364 1193 SUPERFAMILY L domain-like 644 766 - -
Bda04g00364 1193 ProSitePatterns Protein kinases ATP-binding region signature. 886 909 IPR017441 GO:0005524
Bda04g00364 1193 PRINTS Leucine-rich repeat signature 701 714 - -
Bda04g00364 1193 PRINTS Leucine-rich repeat signature 345 358 - -
Bda04g00364 1193 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
Bda04g00364 1193 Pfam Leucine rich repeat 680 738 IPR001611 GO:0005515
Bda04g00364 1193 Pfam Leucine rich repeat 362 404 IPR001611 GO:0005515
Bda04g00364 1193 Pfam Leucine rich repeat 226 284 IPR001611 GO:0005515
Bda04g00364 1193 Gene3D Ribonuclease Inhibitor 40 770 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00364 Bda-Chr4:49930326 Bda10g00344 Bda-Chr10:34019536 0 dispersed
Bda11g00437 Bda-Chr11:4637431 Bda04g00364 Bda-Chr4:49930326 7.94E-13 dispersed
Bda14g01141 Bda-Chr14:10578947 Bda04g00364 Bda-Chr4:49930326 1.58E-08 dispersed
Bda15g00614 Bda-Chr15:9322600 Bda04g00364 Bda-Chr4:49930326 7.91E-110 dispersed
Bda04g00364 Bda-Chr4:49930326 Bda03g01111 Bda-Chr3:11359984 2.27E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69594 PF00069 Pkinase 1.40E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00364 K13415 - csv:101209118 1791.93