Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00372 ATGCCTGCTTGGTTTGGAAAAAAGTCTACCAAGAATAAAGAGCAGCCAAACCAGCTTCAGGAGGAAGACTTCCACAGCAGCCACATCAAATTTTCAAAATCTTCCATAAAAACTGACCGGAAATCGAGAGATAATCCCAAGAGTTTTGACGACGCTTCCGTCGTATCTGTCTCCCATAAATCGCCGAGGTCAAGCAGAGATCTCGGACTGTCGGGCGGCGCTTATGGGTCTTCTGGATTTTCTGGTTTTGACTCCGATAGCTCGGAGAGGAAGGGTCATCCTCTTCCTCAGCCATCGGTTTCTACAACGCATAACTTTGTGGTAGATCATGGGGTCGGAATTGGATCTGGGTCGGTTTCAGTTTCAAGTGTTAGTTCTTCGGGGTCTTTCGATGATCATCCGATTGATTCCAAAATGGATCCCTCAAGCGTGTGGCGAAATGCGACTGTTGCTTCTGATTCTCCACGCACAGATTCCACAACGAGAAGTTTTGGAACAGGATCAAGGGGGCCGACCAGCCCTTCCTCCCCTCTTAACTCTCGGCTATGCGGGTTCAGCGTGGAATCTCCATCCGGAAAGGTTGACGATGGGAAGAGCCAATGCCATCGTTTGCCACTCCCACCGAGCTCTCCGACCAGCCCTTCTGCCTTGCCTAACTTCAGACCGGTTGGAGCTGCTGAAAACTCTCCCTCCCAGCCTTGTTGGAAGAAGGGTCGGCTTCTAGGACGAGGAACTTTTGGACATGTTTACCTCGGATTCAATAGTGTAAGTGGGCAAATGTGTGCGATAAAGGAAGTCAAGGTCATCGGCGATGACTCGTCATCGAAAGAATCCCTCAAACAACTGAACCAGGAGATAAATTTGCTTAGCCAGCTTTCTCACCCAAATATCGTTCGATATTACGGAAGTGAAATGGGCGATGAAGCACTCTCGGTTTATTTAGAATATGTCTCGGGTGGCTCGATCTACAAATTACTTCAAGAATATGGAGCATTCAAGGAACCTGTAATACAGAATTATACAAGGAAAATCATTGCTGGACTCGCATATCTCCACGCAAGAAATACGGTGCACAGGGACATCAAAGGGGCTAACATATTAGTAGATCCCAATGGTGAGATCAAGTTGGCAGATTTTGGCATGGCGAAACATATAACCAGCTGCAGTTCAATGCTGTCTTTCAAAGGAAGTCCTCATTGGATGGCACCTGAGGTTGTGATGAACACTAACGGCTACAATCTTGCGGTGGATGTTTGGAGCTTGGGTTGTACGGTTCTCGAAATGGCAACCTCAAAACCGCCTTGGAGCAAGTACGAAGGGGTGGCTGCCATATTTAAAATAGGAAACAGCAAAGAGCTTCCCGAAATTCCCGACCATCTCTCGAACGATGCAAAAAGTTTCATCAGACTCTGCCTTCAGCGGGAGCCTTCTGCACGCCCAACAGCTGCACAATTACTAGAACACCCTTTTGTTCGAGACCAATTCTCACCTAGAGTTTCCAATGTCACTACCCCTATCGACGCTTTCACTTTTGCCTTCGACGGAAGCCTTACACCTCCAAGATTAGATAATCGCGCCAATCGGAAAAGTATTAGCACGGTCGACGGAGAATACATTCAAAAACCCGTTGTAATGACAGCGAGAACGACAAGAAGATCGAGTGAATATGTGAGATTGATCACATCGTTACCAGTGTCTCCGTGTTCGAGCCCGTTACGGCAGCGTGGACATGAACAAAGAAGCTTCTTACTTTCACCACCACGAGCGTCTTACCGTACAATGATGGGCCATAATGGATATTCCAATTGGAACGACTTGTCACCACATGCAACGAGGCCGAACGCAATGTACAATCTCGATCCTACCCCTCTAATCGGAATCCATACGCCTGGTGGATCTCCAAAGACTAGACCCATTTAA 1920 47.55 MPAWFGKKSTKNKEQPNQLQEEDFHSSHIKFSKSSIKTDRKSRDNPKSFDDASVVSVSHKSPRSSRDLGLSGGAYGSSGFSGFDSDSSERKGHPLPQPSVSTTHNFVVDHGVGIGSGSVSVSSVSSSGSFDDHPIDSKMDPSSVWRNATVASDSPRTDSTTRSFGTGSRGPTSPSSPLNSRLCGFSVESPSGKVDDGKSQCHRLPLPPSSPTSPSALPNFRPVGAAENSPSQPCWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVIGDDSSSKESLKQLNQEINLLSQLSHPNIVRYYGSEMGDEALSVYLEYVSGGSIYKLLQEYGAFKEPVIQNYTRKIIAGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITSCSSMLSFKGSPHWMAPEVVMNTNGYNLAVDVWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKELPEIPDHLSNDAKSFIRLCLQREPSARPTAAQLLEHPFVRDQFSPRVSNVTTPIDAFTFAFDGSLTPPRLDNRANRKSISTVDGEYIQKPVVMTARTTRRSSEYVRLITSLPVSPCSSPLRQRGHEQRSFLLSPPRASYRTMMGHNGYSNWNDLSPHATRPNAMYNLDPTPLIGIHTPGGSPKTRPI 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 50125331 50129548 + Bda019301.1 Bda04g00372 5394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00372 639 MobiDBLite consensus disorder prediction 116 132 - -
Bda04g00372 639 SMART serkin_6 235 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00372 639 MobiDBLite consensus disorder prediction 49 65 - -
Bda04g00372 639 MobiDBLite consensus disorder prediction 142 186 - -
Bda04g00372 639 MobiDBLite consensus disorder prediction 14 48 - -
Bda04g00372 639 ProSiteProfiles Protein kinase domain profile. 235 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00372 639 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 620 - -
Bda04g00372 639 CDD STKc_MEKK1_plant 235 491 - -
Bda04g00372 639 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 620 - -
Bda04g00372 639 MobiDBLite consensus disorder prediction 1 232 - -
Bda04g00372 639 ProSitePatterns Protein kinases ATP-binding region signature. 241 264 IPR017441 GO:0005524
Bda04g00372 639 MobiDBLite consensus disorder prediction 92 106 - -
Bda04g00372 639 SUPERFAMILY Protein kinase-like (PK-like) 235 549 IPR011009 -
Bda04g00372 639 Gene3D Transferase(Phosphotransferase) domain 1 234 509 - -
Bda04g00372 639 Pfam Protein kinase domain 236 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00372 Bda14g01046 CCT
Bda04g00372 Bda10g00399 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01685 Bda-Chr1:52913601 Bda04g00372 Bda-Chr4:50125331 1.19E-88 dispersed
Bda04g00372 Bda-Chr4:50125331 Bda10g00385 Bda-Chr10:35564573 0 dispersed
Bda05g00241 Bda-Chr5:41124291 Bda04g00372 Bda-Chr4:50125331 1.41E-45 dispersed
Bda13g01619 Bda-Chr13:39677955 Bda04g00372 Bda-Chr4:50125331 3.51E-42 dispersed
Bda07g01891 Bda-Chr7:36324652 Bda04g00372 Bda-Chr4:50125331 8.79E-141 transposed
Bda15g00714 Bda-Chr15:10541285 Bda04g00372 Bda-Chr4:50125331 6.13E-139 transposed
Bda10g00399 Bda-Chr10:36060174 Bda04g00372 Bda-Chr4:50125331 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69595 PF00069 Pkinase 3.40E-72 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00372 K04421 - cpap:110816131 746.888